Scomber japonicus (chub mackerel): 128381437
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Entry
128381437 CDS
T09718
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2-like isoform X1
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04137
Mitophagy - animal
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128381437
04137 Mitophagy - animal
128381437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381437
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128381437
Membrane trafficking [BR:
sjo04131
]
Autophagy
Xenophagy
Cargo receptors
128381437
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
128381437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
TPR_MLP1_2
GAS
Zn_ribbon_10
CCDC39
Motif
Other DBs
NCBI-GeneID:
128381437
NCBI-ProteinID:
XP_053197427
LinkDB
All DBs
Position
20:complement(4608529..4628557)
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AA seq
612 aa
AA seq
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MASLTDTAAAAAAAAAAAAAAAAANSSARTFSQVVFTDIPHSYPPATPITCCYTITEAFQ
PNSRDWVGIFKVGWSTTKDYHTFVWVELDAAGQQDVRQADFKEYYLPKDEIEFYQFCYVD
SGGQVRGASTPFCFKSPVEQNLESSMDEDLLVITTQEQVDQSVREKAELKKEMDQMREEN
ESLKKALQEAKSSMEEQNGQKEKEKSDLVEELDQTKEQNEKLRSSVQEKEQEIDRLKEEM
MLQKSKQMEIQQQNAAEIQKLSQSVRSDEAARQNETHAQEKYDRAVMKINQLKEEREELR
GKNEAQSDEMAKLSSKLREAERELFKMKDSIQLLQVDLQSSEKEKERLAAELHQLQSVTH
NMDEVKKENKELNLRLSQQETQQQQQQSSPDEDLKALRKQLQELQTKLSAEKEESKNSKR
RADFLEGELMQVRGQLDSVAETLDQMQRRSSKQEMKLLEAHEMIADKEGIIEEKEHNILL
VKKEIEDLVKENENLKGDMDELRRVYADYQADPSSSSVDPPAYVQPDDVQPAASSIQDGS
EQSENLYETIGSEEPEEEQALVCRHCQERFPGITQQELEQHEQSHRVCPFCTMICDNMEQ
SVFEDHVYSHEL
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccttactgacacagcagcagcagcagcagcagcagcagcagcagcagcggcg
gcagcggcagcgaactcatcggcacgcactttctctcaggtggtgttcactgacatcccg
cattcgtacccgcccgccacccccatcacctgctgctacaccatcactgaggccttccag
cccaactccagggactgggtcggcatcttcaaggtcgggtggagcacaacgaaggattat
catacctttgtgtgggtggagctggacgcagcggggcagcaggacgtcagacaggcagat
tttaaggagtactacctgccgaaagacgagatcgagttttaccagttctgctacgtcgac
agtggcggtcaggtgcgaggagccagcactcctttctgtttcaaaagcccggtggagcaa
aacctggagagcagcatggatgaagacctgctggtgatcacaacacaggaacaagtggat
cagagcgtccgagagaaagccgaactaaagaaggagatggatcagatgagagaggagaac
gagtccttaaagaaagctctgcaagaagccaagtccagcatggaggagcagaacggacag
aaagagaaagagaagtccgatctggtggaagagctcgatcagactaaagagcagaatgag
aagttgagaagcagcgtgcaggagaaggagcaagaaatcgaccgtttaaaggaggagatg
atgctccagaaatctaagcagatggagatacagcaacaaaacgctgccgagatacaaaag
ctgagtcaaagcgttcgttcagacgaagctgcaagacaaaatgagacacacgctcaggag
aaatacgatcgagcagtgatgaagatcaatcagctgaaggaggagcgcgaggagctgcgg
gggaagaacgaggctcaaagtgacgagatggcaaagcttagctccaaactcagagaagca
gaaagggaattgttcaagatgaaagacagcatccagctcctacaggtggatctccagagc
agtgagaaagagaaggagaggctcgccgcggagctccaccagctgcagagcgtcacgcac
aacatggacgaagtgaagaaggagaacaaggagttgaatctgaggctttcccagcaggag
acgcagcagcagcagcagcagagctcacctgatgaggatctaaaggctctacgcaaacag
cttcaggagcttcagaccaagctgtcggcggagaaagaagagtccaaaaactccaagaga
cgagccgacttcctggagggcgagctgatgcaggtcaggggtcagctggacagtgtcgct
gaaacacttgatcagatgcagcggagaagcagcaaacaggagatgaaactcctggaggct
cacgagatgattgcagataaagaaggaatcatcgaggagaaggaacacaacatactgctg
gtcaaaaaggagatcgaggacctcgtaaaagaaaacgagaatctcaaaggcgacatggac
gagcttcgtagagtttatgccgactaccaagcggatcccagctcctcgtcagttgatccg
ccagcgtacgtgcagccggatgacgttcaaccagctgcttcgtccatccaagacggatcc
gagcagtccgaaaacctgtatgagaccattgggagtgaagaaccagaggaagagcaggcg
ttggtttgccgccactgccaggagagattcccgggcatcacgcagcaggagctggagcag
cacgagcagagtcaccgagtgtgtcccttctgcaccatgatctgtgacaacatggagcag
tcggtgttcgaagatcacgtctacagtcacgagctgtga
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