Scomber japonicus (chub mackerel): 128381470
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Entry
128381470 CDS
T09718
Name
(RefSeq) interferon a3-like
KO
K05414
interferon alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
sjo04217
Necroptosis
sjo04620
Toll-like receptor signaling pathway
sjo04621
NOD-like receptor signaling pathway
sjo04622
RIG-I-like receptor signaling pathway
sjo04623
Cytosolic DNA-sensing pathway
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128381470
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128381470
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128381470
04621 NOD-like receptor signaling pathway
128381470
04622 RIG-I-like receptor signaling pathway
128381470
04623 Cytosolic DNA-sensing pathway
128381470
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128381470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128381470
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Interferons
128381470
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
128381470
NCBI-ProteinID:
XP_053197465
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Position
20:4299707..4301269
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AA seq
180 aa
AA seq
DB search
MMNRIFLSCLLLSLYSAGSSLSCRWLDHKFRQYNQRSSELLDTMVNNSTNTTEDAELEVA
FPHDLYTQASKASAGERLGFIVQTLDQMALLFQEDHNSTSWEENTVDDFVNVVSEQADGL
RSCIGRHNHKNKKLRMYFKRLSGHIGRMGHSAEVWVLIRKEMKVHLFRVNQLASSLITKN
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaggatcttcttgtcttgcctgctcctcagcctgtacagcgcaggctcctcg
ctgagctgcagatggttggatcataagttcagacagtacaatcaaaggtcttcagagtta
ctggatacgatggttaataattccaccaacaccactgaggatgctgaactggaggtggcc
ttccctcatgatctgtacacccaggcatccaaagcatcagctggggagcgtcttggtttc
attgtgcagactctggatcagatggctctcctgtttcaggaggatcacaactctacatcc
tgggaggagaacacagtggacgactttgtcaatgtagtcagcgagcaggctgatggtctg
cgctcctgtattgggaggcacaaccacaagaacaagaagctgcgcatgtatttcaagaga
ctgtcaggtcatattggacgaatgggccacagtgctgaagtctgggtgctgatcaggaag
gaaatgaaagttcatcttttcagagtcaaccagctggcttcatctctaatcaccaagaac
tga
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