Scomber japonicus (chub mackerel): 128381529
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Entry
128381529 CDS
T09718
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04514
Cell adhesion molecule (CAM) interaction
sjo04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128381529 (lrrc4bb)
04517 IgSF CAM signaling
128381529 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128381529 (lrrc4bb)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
NGL family
128381529 (lrrc4bb)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Ig_6
DUF7617
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
128381529
NCBI-ProteinID:
XP_053197532
LinkDB
All DBs
Position
20:complement(16528464..16531260)
Genome browser
AA seq
745 aa
AA seq
DB search
MRVVMVTSPCSPSPLLWLVQLLLWFHNHGPQLTEAAPPCPTPCTCSNQASRVICTRKTLD
QVPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVETVDTVGGGGDDKNSARQYINETFIDFP
NPTVQRGVLEGQPGITISPSLSSLSSLSPRANRATENAVTVSIIDVTNIPGLDDVMKTTK
IIIGCFVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGS
TMNSGGGEGTLRIHHPEIVNLPNIGRSDTLNHYYKTHHFNNNVMGLSIGSEGMGPGGMLN
NKQGQDIPISCTSVPISTSNLLTTSGNGINTNPISMSPPLPMSLPMPTMGLHGSIKGFMG
QNQNPQMEPLLFKGSSKENVQETQI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgttccccttcccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggacctcagctgacagaggcagcacccccctgcccc
accccctgtacctgctccaatcaggcgagccgtgtcatctgtacaaggaagactttagat
caagtcccagacagtatttcagagaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacctttaagcatctgcggcatttggaaatcctccagctctct
aagaaccatatccggcagattgaggtgggagctttcaatggccttcctaacctaaacacg
ctggagctttttgacaaccgtctcacagtggttccatcacaagcctttgagtacctcagc
aagctaagggaactatggctacgaaacaaccccatcgagacgctaccggcatttgccttt
caccgtgttccctctttacgccgtctcgatctaggggaactcaggaaactagatttcatc
tcagaggctgcgtttgaaggtctggtcaacttgcgtttcttgaatcttggcatgtgcggc
ttgaaggacatccctaatctcaccccgcttgtacgactagaggagttggagctgtcaggg
aaccagctggggatagtcagaccaggatctttccagggcctagtgtcgcttcgcaagctg
tggctaatgcactccagagtttcagtcattgaacgcaatgcttttgatgacctcaaaaac
ttagaggagctcaacctctcccacaattccctgcattccctgcctcatgacctcttcacc
cctttgcaccagttggagagggtacatctcaaccacaatccttgggtgtgcaattgtgat
gttctgtggctcagctggtggctgaaagaaacagttcccagcaacaccacatgttgtgct
cgctgccatgcacccccaggtctgaagggcaagtacattggggaactagaccagagccac
ttcacctgctatgccccagtgattgttgagccacccactgacctcaatgttactgagggt
atggctgctgagctgaaatgtcgtactggaacctcgatgacgtctgtgaattggttcact
ccaaatggcactctgatgacccacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaagacaccgggcagtatacttgcatggta
accaactcagccggaaacaccactgcgaccgccgtgctcaatgtgtctgcttcagacccc
agcaacagctacagctatttcaccactgttactgtggaaacagtagatacagtaggagga
ggaggagatgataagaactcagcaagacagtatattaacgagaccttcatagatttccct
aatcctacggttcaaagaggggtgttagagggccaacctggcatcacaatatctccttct
ctctcttctctttcatcactgtccccacgagctaacagagccactgaaaatgctgtgact
gtgtccataattgatgtaactaacattccaggcttggatgatgtaatgaaaacaactaag
atcattattggctgctttgtggccattacttttatggcagctgtaatgttggtggtcttc
tataaacttcggaagcagcaccagctacacaagcaccacggacctgccagagccattgaa
attgtcaatgtagaagatgagattggagctggtgccggaagtggcatctcaggtggttca
accatgaattctggtggtggagaaggaaccctacggatacatcatccagaaatagtcaac
ctacctaacattggacgttcagatactctgaaccattactataagacccatcatttcaac
aacaacgtgatgggtcttagtattggctccgaagggatgggaccaggagggatgctcaat
aacaagcaaggccaggatatccccatctcctgtacctcagtcccaatctctacatccaat
ttgctcaccacatcaggcaatggcatcaacaccaaccccatttctatgtccccaccacta
ccaatgtccctacccatgcctacaatgggcttacatggatcgatcaaaggtttcatgggc
caaaatcagaatccccaaatggagcctcttctcttcaaggggagctcgaaggaaaatgtc
caagagactcagatctaa
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