Scomber japonicus (chub mackerel): 128381531
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Entry
128381531 CDS
T09718
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128381531 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128381531 (rbm26)
03041 Spliceosome [BR:
sjo03041
]
128381531 (rbm26)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128381531 (rbm26)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
128381531 (rbm26)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128381531 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup35_RRM_2
RRM_1
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
RRM_3
Motif
Other DBs
NCBI-GeneID:
128381531
NCBI-ProteinID:
XP_053197573
LinkDB
All DBs
Position
1:complement(28018487..28033989)
Genome browser
AA seq
1014 aa
AA seq
DB search
MIIENLDALKTWLSETLEPICDADPSALAKYVVALVKKDKTEKELKALCIDQLDVFLQKE
TQQFVDKLFEAINNKCYLPQPELSLVKVEKDEPKKDEPNREEDREKKFSRRVNHSPSQSS
SRYSRDGRRGDDRKRDDRSRKRDYDRNLPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKDR
IRDRDRERDRERDRDRDRDRDRDRSRSRSHSRTRSRSRSRERDSGKLKYDHDRVDRSEGA
DGYAPAALVSTATTSHFPVPTLSSTITVIAPTHHHSNNTTESWSDFRPEHPVDRGPFRPP
PLQPRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPSMLPFQPPPIPGVDAPPPPG
LPPPPPLMNPPPVNLRPPVPPPGSLPPSLPPVAGPLPPLPPLQPSGMDAPPNSITSSVPT
IVTSGMRSSLPQASAPLFTSDTYDSDVYNPEAPSITNTSRPMYRHRVNAQRPNLIGLTMG
DVDQPQRDKIPNNSMRIVMESDSRKRSSVTHDGGIPIKKPWFDKPNFNKPNHQGYHKRAP
FNSPNTKLLVRQIPSELNNISKLNEHFSKFGTIVNLQVAYQNDPEGALIQFASPDEAKRA
MQSTEAVLNNRFIRVHWFRENGSDGQNQGQLHLQPQLQSQPATQPSATSLKQSVKDRLGP
MIPSNSEPSQDSSVASQNPSKVSVKERLGFSAKPAAPVEKVYSTSMGLTKTVFNPAALKA
AQKTTEEAMRKKQEALRLQQDVRKKKQEILEKHIETQKLLISKLEKNKTMKAEDKAKIME
TLGMLTKSITKLQEEIKGVSSATGLLRTAKSKAQAQKELLDAELDLYKKTQAGEDTALLK
IKYTQLQIEAAKRGLLSPGRGRGAPPRGRGALRARGRGSRGRGRGLPVHAVVDHRPRALE
ISGFTEAERVDLLPHFAQFGEIEDCQIDESNLTAVITYRSRAEAEQAALHGLKLNNQSLR
LAWHKPVTTLSTADADEAEPEEDEQYPEESLSDDALLQDDDEEEDDNDSRPWRR
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaacctcgatgccttgaaaacgtggctgtccgaaaccctcgagcccatc
tgtgatgcagacccttctgcgcttgccaagtatgttgttgctttggtgaagaaggacaaa
actgaaaaggaacttaaagccctctgtatagaccagttggatgtatttcttcagaaagag
acgcagcaattcgtggataaactgtttgaagcgatcaacaataaatgctacctccctcag
ccagagctctctctggtcaaagtcgagaaagatgagccaaaaaaagatgagcctaaccgg
gaagaggatcgagagaagaagttttctcgccgagtgaatcacagcccttcacaatcaagc
tctcgctatagcagagatggcaggagaggggatgaccgtaagagagacgaccgctccagg
aagagggattatgaccgcaacctgccaaggagggactcgtatcgcgatcgttacaatcgc
aggaggggccgcagtcgcagctacagtcggagccgcagccggagttggagcaaggatcgc
attcgagatcgtgacagagagagggacagggaaagggacagagacagggatagggacaga
gatcgcgatcgaagcaggagccggtcacacagcagaactcggtctagaagcagaagtaga
gaacgcgattctggaaagttaaagtacgatcatgatcgagtggaccggtcagagggtgct
gatggctacgccccagctgctctggtctccactgcaaccacttcacacttccctgtgcca
accctgagcagcaccattacagtcatcgctcccacacatcatcatagcaacaacaccaca
gagagctggtcggacttccgccctgagcaccctgttgatcgcggcccttttaggccacca
cctcttcaaccaaggaagcgatgccgtgattatgatgagaaaggcttctgcatgcgagga
gacatgtgtccctttgaccatggaagtgacccagttgtagtggaggatgtcaatttgccc
agtatgctgccctttcaacctccaccgatcccaggcgtggatgccccgccgcccccaggt
cttccaccccctccaccactcatgaaccccccacctgtgaacctgcggccccctgtaccc
ccaccaggcagtctcccacctagccttccacctgttgcaggtccccttcctccccttcct
cccttacaaccgtcaggcatggatgctcctcccaattccatcaccagctctgttcccacc
atcgtcacctctgggatgcgctcctcactcccccaggcctcggcaccactcttcacctcc
gacacctatgattcagatgtgtacaatccggaagctccgagcatcaccaatacctccagg
cccatgtaccgccaccgagttaatgcccagagacccaacctgatcggcctcacaatgggg
gatgttgaccagccacaaagagacaagattccaaataacagtatgaggattgtgatggag
tccgattcaaggaagagatcatccgttacccatgatggaggtatccccatcaagaaaccc
tggtttgacaaacccaactttaacaaacccaaccaccagggctaccacaagagagcccca
ttcaactctcccaacacaaagctgctggttcgacaaattccctctgagctcaacaacatc
agcaaactcaatgaacatttcagcaagtttggcaccatcgtcaacctgcaggtggcttac
cagaacgacccggagggggcactgatccagtttgcctccccagacgaggcaaagcgggct
atgcaaagcactgaggctgttctcaacaaccgctttatcagggtgcactggtttcgtgag
aatggaagtgacggccagaatcagggccagttgcacttacagccgcagttgcaatcacag
ccagccacgcagccctcggccacgtctctgaagcagtctgtcaaagatcgcctcggaccc
atgatcccttcgaactctgagccctcccaagattcctccgtagcctctcagaatccctct
aaagtgtcagtgaaggaacgtttgggtttctctgccaaaccagcagctcctgttgaaaag
gtgtattcaacctccatgggcctgacaaagaccgttttcaaccctgctgccttgaaggct
gcacagaaaaccacagaagaagccatgaggaagaagcaggaagccctgagactacagcag
gatgttagaaagaagaagcaggaaatactggagaaacacatcgaaacgcagaagctcctg
atctccaaacttgagaagaacaaaacgatgaaagcagaggataaagccaaaatcatggag
accttaggcatgttaaccaagagcatcaccaaactgcaagaggagataaagggtgtctca
agtgccaccggcctgctgcgcacagccaagagcaaagcccaggcacagaaggaactgcta
gatgcagagctggacctgtataagaagacacaggccggagaggacactgctttgttgaag
atcaagtatactcagcttcaaattgaggcggctaaaagggggctcttgtcaccaggacga
ggccgtggggcccctcctcggggtcgtggcgctcttagggcccggggaaggggctctaga
gggcggggaagaggtctgccagtgcacgcagtcgtggaccatcggccgcgagcgctggag
atttctggttttactgaggcagagcgtgttgacctgctgccacactttgctcaatttgga
gagattgaagattgccagattgatgaaagcaacctgactgcagtcatcacgtacaggtca
agagcagaggcagaacaggcggctctacatggattgaagctgaacaaccagagtttacgt
ctggcttggcataagcccgttaccactctcagcactgcagatgctgatgaggccgaacca
gaggaggacgagcagtacccggaagagtcgctaagtgatgatgcattgctgcaggatgac
gatgaggaagaagacgacaacgattctcgtccctggcgcagatga
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