Scomber japonicus (chub mackerel): 128381546
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Entry
128381546 CDS
T09718
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128381546 (med1)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
128381546 (med1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
128381546
NCBI-ProteinID:
XP_053197553
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Position
20:13294980..13305934
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AA seq
1826 aa
AA seq
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MAAGPGVSMQGGSPARELTLSVQQAGNQTHVDRVKAEDVTEAEKQSRMAALLERLHAKHN
ASRPWQETSKVVRQAMEKRGMMNAAGHQLLLTCLETLQRALKVSSLPSMTDRLESIARQN
MLGSHLSPSGTECYITSDMFYVEVQLDTAGQLMDVKVAHQGENPTSCPELSQHLREKNFE
EFSKHLKGLVDLYKLPGDNKLKTKMYIALQSLELDLTKMMHMFRLATNANTVETIVHGSV
GLLTARSGGHLVSLQCYVSPYDIFEEGTGSHLNLTDSNVPLSLGVSVSVTIEGTSAVYKL
PIAPLITGSHPVDNKGTPSFSTVTNSNCVDLPACFFLKMNRPMPFSLSFIQRLGNATSIP
VFESSPSLSPLYQLIVQSQLQLLEEGSTTPPPSHNMHFFSVLPDQQHCYFLNGDAPVQDG
HSLQGALVTKIPFRHPAQVPLLLDIIRHQAAYNTLIGSCVKRTSIREDSAGLLQFEVCPL
TDSSFSVSFQHPVNESLVCVVMEVIDSRQVSCKLYKGLSDALICTDEFITKVVQRCMSIP
VTMRAIRRKAETIQADTPALSLIAQTVEIMVKNNLPPSGSPTYNMAAGDVTNPMGLPGLG
GGSTPTGGGPPGGPNFPGPISSLFGMSRTERQAQGGECLPQGGVTGQQQVQQQLQQQQAG
QGHTDDYSKVTQNPILTSLLQTTGSVGSSPSSQNAPQPHQTPPPTSSPASNTKNHPMLMN
LLKDNPTQDFATLYGSSPLERQNSSSGSPRTDSMGGACPGSGTKQKKKRPRGTEKGGVLP
GTAAGGGGGALGMKSQQGSSMSHHQHHQVTHEDDFHRELLSMDVDASQNSIFDVNLTGDG
LDTPHSITPAPSQCGTPPSGPSMPYSQSHVQSQQQQPPGTVPPRMVRLSSSDSIVPDITE
ILSDLPEQTGKGSSGSHGQHTMGSGGEDGGPLGTPIRDSSSSGQGSAVFDSADIFNTNSN
ENPFTDAAELIAEATATAATPTSDSSSTNFFPDAADFNPDLLTSGHGFPQNYFDDSSPSA
DGDMDLVKGFGGSSQQNTPSGTPQNPTPHGQSTPEPSLKDPFDMGIVFGGNSGGGKPLLG
QAPDLGDTHGGGSQSPLMMGLGAACGDFKSAEPKVKQQQGLMRPKDENGGSGGSSSGMGS
ISTEGKQVKRSRTPSSEGKSKDKPPKRKKLDPDGKSPSHSSGGRPYTPPSGGSGSGGSIS
GGGSKSPGSSGRSQTPPGGGTLRIPKITIQIQKGTITGGKTSSHSGYTSSSSSTGSTGGA
GGTSSSKSHHSHSSSSGKIKSKEGSMAQGNSSKPGSVGVGVGGGPSQSKGSSQGMGVGKP
GSSPITKHGLSGPGGSGGGMGSSSKMKPQGGKPSGSLMNPSIKPNISPSHSRSSSSGDKL
SSPMKMQQSQVPGTPPSSKAKSPMGSGGGSSGGSKSSGGGISSQKPMGGSSSSGSTSSSS
SSNSSSSSGSMNFSGGSQSQYGGGGGGSGGGAGGGSGSGGSGGGGGGGGGGGSGGGQNNS
NNPNAKGKSPSRNKKPSLTAVIDKLKSVGGGGVGEDGCEVGPPGGGSGTGSAPGSVPSSG
SSSMGPSKHSTSSQSGEYKREKSDKEGKAKVSVSVGNSGDKKLMDPKTGGVSMTGLAKII
ISKPDGGSPSIKAKVTPQKPGEGSGESMRPQISSLKASPLFSGSTPKHDRSSPSHSRSPG
YTPLNHDSESESGSSSVAEKSHQNSPSSDDDQTMRPLHPQDYMSSIPVSSGEKHKKHKKE
KKKQKERERERDRDRERDREKEKNKSSMSIGPSSHPIKADSWSRSPISASESSLSMLGSE
RPSRPSPMYMRNEDDDLMDSALTGNL
NT seq
5481 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggcctggtgtttctatgcagggcggtagtcctgcaagagagctaactctc
tctgttcaacaagctgggaaccaaactcatgtagatcgggtcaaagccgaagatgtcaca
gaagcagagaagcagagtcgcatggctgctttgctggagaggcttcatgccaaacataat
gcttcacgaccatggcaggagaccagcaaagttgtgcgtcaagccatggagaaacgtggt
atgatgaatgcagcaggtcaccagctcctgctcacctgcctcgagaccctgcagagagcg
ctgaaagtctcatctctgccctccatgacggatcgtcttgaatccatcgctcgacaaaac
atgctgggttcccacctcagcccatcagggactgagtgctacatcacatcagacatgttt
tatgtggaggtgcagctggacactgctggccagttaatggatgtcaaagtggctcatcaa
ggagaaaaccctacgagctgccctgagctgagtcagcatctaagggagaagaactttgaa
gagttttccaaacacctgaaaggactggttgacctatacaaactccctggagacaataaa
ttgaaaaccaagatgtatatagctctgcagtctctagaactcgatctcaccaagatgatg
cacatgtttaggttggcaaccaatgctaataccgtagagactatagttcacggcagtgtg
ggcctgctgacagccaggagtggtggccatcttgtttctcttcagtgttacgtgtcccct
tatgacatatttgaggagggaacgggctcacacctcaatttaacagacagcaatgtgcct
ctctctcttggtgtcagtgtttctgtcacaattgagggaacctccgctgtatataagctc
cccattgctcccctcatcactggatcacacccagtagacaacaaggggaccccttccttt
tctactgtcacaaactccaactgtgtggacctgccagcttgtttcttcctcaagatgaac
cgccccatgcctttctcactatctttcattcagaggctgggcaatgcaacttcgatccct
gtgtttgagagctcccccagcctttctcctctctaccagttaatcgtccagagccagctc
cagctcctggaggaggggagcaccacaccaccgccatcacacaacatgcacttcttttct
gttttgccagatcagcagcactgttacttcctgaatggtgatgctccagtgcaggatggt
cattctcttcaaggagcattggtgaccaagatccccttccgccacccagcacaggtgcca
ctactgttggatatcatacggcaccaggcggcctataacaccttgattggcagctgtgtt
aaacgtacttccattagagaagatagcgcaggcctgctgcagtttgaagtatgccctctt
accgactcaagtttcagcgtctctttccagcatcctgtcaatgaatcattagtctgtgtt
gtaatggaagtgatcgactccaggcaggtatcctgcaagctatataaaggactgtcagat
gctctgatctgcactgatgaattcattaccaaagtagtccagagatgcatgtccatccct
gtaacaatgcgggccatcagaaggaaagcggagaccatccaggcagacactcctgccctc
tcactgattgcacagaccgtagagatcatggtgaagaacaacttgccaccttctggtagt
cccacttacaacatggcagcaggcgatgtaactaaccctatgggactgcctgggcttgga
gggggcagcacacctactggcggaggacctccagggggacctaattttccaggtccaatc
agttccctgtttgggatgtcccggacagagaggcaagctcaaggaggggaatgcctaccc
caaggtggggtaactgggcagcagcaggtgcaacaacaacttcagcaacaacaggcaggt
caaggccatacagatgactacagcaaagtcacacagaatccaatactgacaagtctgtta
cagacaactggaagtgtgggttctagtcccagctcccagaatgcaccacagccccaccaa
actccacccccaacctcatcccctgccagcaacaccaagaatcaccctatgctgatgaac
ttgttgaaagacaaccccacacaagattttgctacactgtatggttctagtccattagag
agacagaattcctcatctggctcaccacgcacagacagcatgggaggggcatgccctgga
agtggcacaaaacagaagaaaaagcgtccaagggggacagaaaagggtggggtgttgcct
ggaactgctgctggtggtggaggtggtgctttaggcatgaaatcccaacagggatcttcc
atgtcgcaccaccaacaccatcaagtcacacatgaggatgatttccaccgtgagctcctc
tctatggatgtagatgcatctcaaaattctatctttgatgttaatctgactggtgatggc
ttagacactccccacagcatcactcctgctccgagccaatgtggaaccccaccctctggc
cccagtatgccttattcgcagtctcatgtccagtcgcagcaacagcaaccaccaggtact
gtaccacctcgtatggtacgcctttccagctctgatagcatcgtgcctgatatcacagaa
atcttgtcagatttacctgagcaaacaggcaaaggcagcagtgggagccatggtcagcac
acgatgggcagtggaggagaggatggaggccccttaggtactcctattcgggactcctcc
agctcaggtcaaggcagtgcagtgtttgactcggctgacattttcaataccaacagcaat
gagaatccttttacagatgctgctgaactgattgctgaagcaactgcaactgcagccaca
cccaccagtgattcttcttctactaacttcttccctgatgctgctgacttcaatcctgac
ctccttacttcaggtcatggcttccctcagaactactttgatgacagttctccaagtgca
gatggagacatggacctagtcaagggttttggcggaagtagccaacagaataccccatca
ggtacacctcagaatcccactccacatgggcagagtaccccagagccctcattgaaggac
ccttttgatatggggattgtttttgggggcaacagcggtggtggtaaaccacttctgggg
caagctcctgatttgggagacacacatggtggaggctcccagagccccctcatgatgggc
ctgggagcagcatgtggtgactttaaaagtgcagaacccaaagtgaaacagcaacaagga
ctcatgcggccaaaggatgaaaatgggggaagcggagggagcagctctggaatgggaagt
atttcaacagagggaaaacaggtaaaacgtagcaggactccatccagtgagggaaagtct
aaagacaaaccacccaaacgcaaaaagctggaccctgatgggaagtccccctctcatagc
tcaggtggacggccctatacacctcctagtggtggctccggctctgggggaagcataagt
ggaggaggctccaagtctcctggtagttcaggacgctcgcaaacacctcctggcggtggc
acccttcgaattcctaaaataacaattcagattcaaaaagggaccataactggggggaaa
acttcatcccatagtggatacacctctagcagctcatctacaggcagcacaggaggagca
ggtggaaccagcagcagtaaaagccaccattctcattcctcctcctctggaaagatcaag
tccaaagaaggctccatggcacaaggcaacagttccaagccagggagtgtcggagtaggg
gttggaggggggccatcccagtcaaaaggctcctcccagggaatgggtgttggaaaaccg
ggatcatccccaatcaccaagcatgggctgtctgggcctggaggtagtggaggcggaatg
ggaagtagtagtaaaatgaagcctcaggggggcaagccttctgggtctcttatgaatccc
agcataaagcccaacatctccccttctcactcccgctccagtagctctggcgacaaattg
tcctcccctatgaaaatgcagcagtcccaggttccaggaacacccccttcttctaaggct
aaatcaccaatgggctcaggtggtggcagttcaggagggtccaagtcttctggtggaggc
atcagttcccagaaaccaatgggtgggagctcctcctctggttccacatcttcctcatca
tcctcgaattcctcctcttcatctggttccatgaacttctctggaggatcccagtctcag
tatgggggtggcggaggtggaagtggaggaggggcaggaggagggagtggaagtggaggt
agtggtggaggcggagggggtggaggtgggggaggtagcgggggtggtcaaaataattca
aacaaccccaacgcgaaaggaaagtctcccagtcgaaacaaaaaaccttctcttacggca
gtcatagacaaactgaagagcgtaggtggtgggggagtgggagaggatggttgtgaggtt
ggtccaccaggagggggatctggtactggatctgctcctggaagtgttcccagcagtgga
tcttcaagcatgggcccttccaagcattccacatcgtcccaaagtggggagtacaagcgg
gaaaagtctgataaggaaggaaaagcaaaagtttctgtttcagtgggaaacagtggggat
aaaaagctgatggacccaaaaacaggaggggtgagcatgactggtctggctaaaatcatc
attagcaaacctgatggaggctcacctagcatcaaggccaaagtgacccctcagaaaccc
ggggaaggatctggtgagtctatgcgtcctcaaatttctagcctcaaagcttcccctctt
ttcagtggctcaactcccaagcatgaccgctcctcaccaagccacagccgctcaccagga
tacaccccgctcaaccatgacagtgagagcgagtcgggcagcagctctgtagcagaaaag
tcccaccaaaacagtccaagctcagacgacgaccagaccatgcgccctcttcacccccag
gactacatgagctccatccccgtcagctcaggggaaaagcacaagaaacacaagaaagag
aaaaagaaacagaaagagagggaacgggagagggacagagaccgagaacgggacagagag
aaagagaaaaataagtcatccatgtccattgggccttcctcgcatccaataaaagcagac
agctggtcaaggtcacccatctcagcctcagagtcgtctctgtccatgctgggttcagaa
cgtccatcccggccaagcccaatgtatatgagaaatgaagatgatgacctcatggactca
gctctcactggcaacctttaa
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