Scomber japonicus (chub mackerel): 128381558
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Entry
128381558 CDS
T09718
Symbol
trim65
Name
(RefSeq) tripartite motif-containing protein 65
KO
K12031
tripartite motif-containing protein 65
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128381558 (trim65)
Ubiquitin system [BR:
sjo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128381558 (trim65)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-B_box
zf-Nse
WipA_Phos
PI3K_P85_iSH2
IFT57
U-box
Prefoldin
DUF7194
Motif
Other DBs
NCBI-GeneID:
128381558
NCBI-ProteinID:
XP_053197566
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All DBs
Position
20:22711061..22718377
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AA seq
520 aa
AA seq
DB search
MSALSSEMEAHNLNLSCPICLDCFEVPVTIPCGHTFCHKCISAHWDTLSKSDAEPQCPLC
QEKFPTRPVLKRNVSLCVLTEAANSSGPSHRESLTRGGKVAKAMLLCDRHKKPLVYYCRQ
DKMSVCCECGISECMNHEKAMLDAERENQELLLERKNKEVGKLIEETEKSIKDLAENIDQ
AKVTLQQTSTWVNVKFSTLIKILSEKQNTTEVFVEEQRQAAISDAEARLAELQDRAQKLK
ESQGQIAALHKLSDTELIKESMLVEVPHFEEIPTDIPPNLQERLNGVTEVLSRVSKMVSE
DLEKAVSTAVGQDKEASPQDKRPILAVVPSPAAPCHPGGKEGLSAYRCSLTFDPRTANGH
LFLSQENRRAEHLTSGPRPVPAHEARFDHTWQVLCFQGFKHGQHYWELEVSKPWAYLGVT
YETIPRKEKGKRCMVGMNDLSWSLQLDERQLSAWHNGRRETVAGHSQHSRIGMLLDYEAG
TLTYYGDGQTRLHAFHCAFTQELFPACWIGEGVSITLCST
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctctttcttcagagatggaggcccacaatttgaacctgtcctgtcccatatgc
ctggactgcttcgaagtccccgtcaccatcccctgcggacacaccttctgtcacaagtgc
atcagtgcccactgggacacgctgagcaagtccgacgccgaacctcaatgccccttgtgc
caagagaagtttcctaccaggcctgttctcaagcgcaacgtgtccctgtgtgtcctcacc
gaggctgcaaacagcagcggcccctcccacagagagtcactcacgaggggcggcaaagtg
gccaaagccatgctgctgtgcgaccggcataaaaagcctctggtttattactgcaggcag
gacaagatgtctgtgtgctgcgagtgcggcatctctgagtgtatgaaccatgagaaggct
atgctggatgcagaaagggaaaatcaagagctgctgctggagaggaagaataaggaggtg
gggaaactcatcgaagagacggagaaaagtatcaaggacctggctgaaaatattgatcaa
gctaaggtgactcttcagcagacatccacctgggtgaatgtcaagttctccaccttgata
aaaatattgtctgagaagcagaacactacggaggtctttgtcgaggagcagagacaggcc
gccatctcagacgcggaggcccggctagccgagctccaggatcgcgcccagaaactcaaa
gagagccaaggccagatcgcagcgctgcacaagctctctgatacagagctcatcaaggaa
tcaatgctggtagaagttcctcattttgaggagatccctacagacatccctcccaaccta
caggagcgcttaaacggtgtcactgaagtcctgtcccgagtctccaagatggtttctgag
gacctggagaaagctgtgagcacggccgtgggtcaggacaaagaagcttctcctcaggac
aagaggcccatcctggctgtggttcccagtccagctgctccgtgtcaccctggagggaaa
gaaggactcagcgcttaccgatgctctctgacctttgacccccgcacggccaacgggcac
ctgttcctctcccaggagaaccggagggcggagcacctgacctccggcccgcgccccgtc
cccgcccacgaagcgcgtttcgaccacacctggcaggtgctctgcttccagggcttcaaa
cacggacagcactactgggagctggaggtgtccaaaccctgggcctacctcggggtgacc
tacgagactatacccaggaaggagaaggggaagaggtgcatggtgggcatgaacgatctt
tcgtggagcctgcagctggacgagaggcagctgagcgcatggcacaacgggcggagggag
acggtggcgggacactcccagcacagccgcatcggcatgctgctggactacgaggcgggg
acgctcacctactacggagacgggcagaccaggctccacgccttccactgtgccttcacc
caggagctgttccccgcctgctggatcggagagggggtcagcatcaccctctgctccaca
tga
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