Scomber japonicus (chub mackerel): 128381631
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Entry
128381631 CDS
T09718
Symbol
tap2t
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo02010
ABC transporters
sjo04145
Phagosome
sjo05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128381631 (tap2t)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128381631 (tap2t)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128381631 (tap2t)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjo02000
]
128381631 (tap2t)
Enzymes [BR:
sjo01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
128381631 (tap2t)
Transporters [BR:
sjo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
128381631 (tap2t)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
AAA_22
AAA_30
RsgA_GTPase
AAA_15
AAA_16
NTPase_1
AAA_29
AAA_5
DUF5313
Zeta_toxin
nSTAND1
Motif
Other DBs
NCBI-GeneID:
128381631
NCBI-ProteinID:
XP_053197651
LinkDB
All DBs
Position
20:complement(10009117..10027303)
Genome browser
AA seq
708 aa
AA seq
DB search
MREVVTCGLFILFFDMVLSLAQWAGLVLLECSSCGGLAGVWALGAVKWASLHVFLSFLTD
GNPEAVLRRFVALLSLLSPALDSVRTLMAPPSEPYTGSTPDYNMLLLVPSSSLLACVIWE
KGLCAGGKSRKNDQDLDSRKLLTRVLKYFRPDVLYLIAAFSFLILGVICDTFIPLYQGNV
IDMLGGKILHADFYYAIGQLALISLGSALFSGLRGGIFMCTLARLNKRLKHLLFHTLLQQ
EVQFFEENNPGRLSSRLHSDVDRMGRTVALNANALVRSTVKTCLMLVVMLRLSWELTVLT
CIEMPLLALVQNKYINVSKEMKEQIQDCHAQNKELAHQTVSAIRTVRSFKGEEGELKRYN
AALEEMGSVKRRSGVYSAVFLLIRRLVSLGIRILWLLQARSLISAGQLSIGSLVSFYLYQ
KPMSNNLREILYCVGETMSTVGVISKVFSYLDRRSKCKTAGELAPETLKGSIVFQNVTFT
YPSQDKPALKSLSFELKPGKMTALVGPSGSGKTSCVSLLKRLYEPQEGQILLDGEPLHHY
QHKYFHQKMALVSQNPVLFSGSLEYNIAYGLKDCDMQKVKKAAMKANADAFISKLENKYD
TDVGECGGKLADGEKQSIAIVRALVRDPQVIILDEATSKLDVAVQHTVLQEVLSCRRTVL
VVAHQLKTVEKADHIIFMEKGVVVEEGTDQQLMAKKGRYHRLKNELFS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagggaagtggtaacatgtggattattcatccttttcttcgacatggtgctgtctttg
gcacagtgggctggactggtgctgctggagtgctccagctgtggtggactggcaggcgtt
tgggccttgggggcagtaaaatgggcctctctgcatgttttcttgtctttcctgactgat
ggaaatcccgaggctgtgctccgcaggtttgtggcgctcctcagccttctgtctcctgcg
ttagacagtgtgcggacactcatggcgcctccctcggagccttacaccggatcaactcct
gactacaacatgctgctcctggtcccctcgtcctcattactggcctgtgtgatttgggaa
aagggcctctgtgctggtggaaagtcgagaaagaacgaccaagacctggactctaggaag
ctgcttacaagagtgttgaaatacttcagaccagatgtcctttacctgattgcagcgttc
agtttcctcatcttaggtgtcatctgtgatacattcatcccgttgtatcagggaaacgta
atcgatatgctaggaggtaaaattcttcatgcagatttttactatgcaattggacaactg
gctctcatctctcttggaagcgctctgttctcgggcttgagaggaggcatattcatgtgc
acgctggctagactgaacaagagactgaagcatctgctgttccacacactcctgcagcag
gaagtgcagttctttgaagagaacaaccccggacgtctctcctcccgcctgcactctgac
gtggacaggatgggccgcacagtcgcgctgaacgccaacgcactggttcgcagcacagtg
aaaacctgcctcatgctggttgtgatgttacgtctgtcctgggagctcactgtgctcacc
tgcatagagatgccactcctggctttagtgcagaacaaatacatcaacgtgtccaaggag
atgaaagaacagatccaggactgccacgctcagaacaaagagctggcccatcagaccgtc
agcgccatccgaacggtccgcagctttaaaggagaggaaggtgaactgaaaagatataac
gcagctctggaggagatgggatctgtcaagaggcgttcaggagtctacagtgcggtcttc
ctcttaatacgaaggctggtgagtctcgggatcaggatcctctggctgttacaggcccgc
agtctcatctccgccggtcagctcagcatcggtagccttgtgtccttttacttgtaccag
aagccaatgtcaaacaatttaagggagattttgtattgcgttggagagacgatgtcgaca
gttggggtcatttccaaagtgttcagctatcttgacagaagatcaaagtgtaagacagca
ggagagttggcacctgagacgctgaagggaagcattgttttccaaaatgtcaccttcacc
tacccttctcaagataaacctgctctgaagtcactttcttttgagctgaagccagggaag
atgacggccctggtgggtccatcgggcagcggaaagacttcctgtgtgagcctcctgaag
aggctctatgaaccccaggagggacagatcctgctggacggagagccgctgcaccactac
caacacaaatacttccatcaaaagatggccttggtatcccagaatcctgtgctgttttct
ggctcattggaatacaacattgcttacggcctgaaggactgcgacatgcagaaggtgaaa
aaagctgcgatgaaggccaacgcagacgccttcatctccaagctggagaataaatatgac
acagatgttggagaatgtggcggcaaacttgcagatggagagaagcagagtatcgccatc
gtcagagctctggttcgagatccgcaggtcatcatactggacgaggccaccagcaaactg
gacgtcgccgtacagcataccgtgctgcaggaggttctgtcgtgtcgtcggacggttctg
gttgtggctcatcagctgaagactgtggagaaggcagatcacatcatcttcatggagaag
ggagtagtcgtggaagaggggacggaccaacagctcatggccaagaaaggacgctaccat
cgtttgaaaaatgaactgttctcttaa
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