Scomber japonicus (chub mackerel): 128381770
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Entry
128381770 CDS
T09718
Symbol
wdr45b
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
KO
K22991
WD repeat-containing protein 45
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128381770 (wdr45b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381770 (wdr45b)
Membrane trafficking [BR:
sjo04131
]
Autophagy
Other autophagy associated proteins
Others
128381770 (wdr45b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_Vps41
ANAPC4_WD40
WD40
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_2nd
WDR55
Beta-prop_HPS5
EIF3I
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_2nd
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_DCAF12
Beta-prop_IFT122_1st
DUF5711
DUF1513
Motif
Other DBs
NCBI-GeneID:
128381770
NCBI-ProteinID:
XP_053197786
LinkDB
All DBs
Position
20:complement(24198256..24208241)
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AA seq
344 aa
AA seq
DB search
MNLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNTDPLKEKEKQEFLEGGVGHVEML
FRCNYLALVGGGKKPKYPTNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGQLIQELRRGSQAANIYCINFNQ
DASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSGSPCLCA
FGTEPNAVIAICADGSYYKFLFNQKGECSRDVYAQFLEMTDEKI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactaccgtcaaatcctcatgggaatgggctcctttatgctggatttaaccag
gatcatggatgctttgcctgtggaatggagaatggattccgtgtgtacaacacagatcct
cttaaagagaaggagaaacaagagttcctggagggcggggtcggccacgtggagatgctg
ttcaggtgtaactatttagctttagtgggaggaggaaagaaacccaaatacccaaccaac
aaagtgatgatctgggacgatctgaagaagaagacggtaatcgagatcgagttctcaaca
gaagtcaaagcggtgaagcttcggcgtgacaggatcgtggtggtcttggactcgatgatc
aaagtgttcacctttacccacaacccccatcagctgcacgtgttcgagacctgctacaac
cccaaaggtctgtgcgtgctctgtccgaacagcaacaactctctgctggcgttccccggg
actcactcaggccacgttcagatagtggacctggccaacacagagaaacctccagttgac
atcccagcccacgagggggcgctgtgctgcatcgccctgaacctgcagggcacgaggata
gctactgcatcagagaaagggactctcattagaattttcgacacgtccgccggtcagctc
atacaggagctgagacgaggctcacaggcagccaacatttactgtattaacttcaaccag
gacgcttccctcatctgtgtgtccagtgatcacgggacagtgcacatctttgcagctgag
gacccaaaaagaaacaaacagtcgagtttggcatcagccagctttctccccaaatacttc
agctccaagtggagtttctccaagttccaggtcccctcaggctctccatgtttgtgtgcc
tttggaacagagcccaacgctgtcatagccatttgtgctgacggcagctactacaagttc
ctgttcaaccagaagggggagtgttccagagacgtctacgcccagttcctggagatgact
gacgagaaaatatga
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