Scomber japonicus (chub mackerel): 128381777
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Entry
128381777 CDS
T09718
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128381777 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sjo03009
]
128381777 (bms1)
Ribosome biogenesis [BR:
sjo03009
]
Eukaryotic type
90S particles
GTPase
128381777 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
AAA
RNA_helicase
nSTAND3
DO-GTPase2
AAA_16
AAA_14
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
128381777
NCBI-ProteinID:
XP_053197792
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All DBs
Position
20:complement(26122628..26140332)
Genome browser
AA seq
1217 aa
AA seq
DB search
MDGKVKEQKRHQQKHSGPKAERKKLRKQGGTTEEDARKRNPKAFAVQSAVRMAKTFHRAQ
DIKAKKHHIPLVDRTPLEPPPIVIVVVGPPKVGKTTLIRCLIKNFTRQKLGDIRGPVTIV
SGKKRRLTFMECNNDINTMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRIMG
VLTHLDSFKNNKTLRKTKKNLKHRFWTEVYQGAKLFYLSGMVYGEYQTQEVKNLGRFISV
MKFRPLVWQTSHPYVLADRMEDLTDPEMLRTDPKCDRTVSLYGYLRGTHLKNKGQVHIPG
VGDFGVGDVNFLPDPCPLPDAQKKRALNEKERLLYAPMAGVGGVVYDKDAVYIDLPANHV
NQQQEEVRPTTELVQSLIDTHSTLDAKIAASKVSLFSGSASMDATDMEQQSGENEGLQEE
RVWDPNTQRERRKVVFTGEEEEDDEEDDGSGSSDDEDADSEESDQEEQEDVEDGDIDNLS
TLIKKARAESEKDGTGGAPPVKKQKMEKKRGDGEESAELPAFADSDDDLEVSEEESDEEA
QKGRAGDSGHCSEEDEEDSDDDEEEEDDDESEEDDGEAAESESEEEEELGALRWKEGLQQ
KASEAFLRQQEAAPNLRKLVYGSVVAGDEEDEDEEELGGLFRVSRPQKSKKFQANSQDCS
RFNPDASHNWDLEEMMNSIKDCFVTGKWEEGQDAATLLKEDEELYGDFEDLETGEVHKGQ
TGQQNQAEQNSENDDEDGDDDDEAEETLMKVDDDEVQKKKRIDKKRRLKERFDAEYDDGD
ATYFDDLKEEMQKQAELNRAEFEDMEDETRVQYEGFRPGMYVRLEISSLPCEFVTNFDPH
YPIILGGLGSSEGNVGYLQMRLKKHRWHNRILKTRDPLILSLGWRRFQTIPLYHIEDHNG
RHRLLKYTPQHMHCGASIWGPITPQGTGFLAVQSVAGTKASFRIAATGVVLDLDKSVTIV
KKLKLIGYPYKIFKNTSFIKGMFNTMLEVAKFEGASVRTVSGVRGQIKKALSTPPGAYRA
TFEDRLLMSDIVFLRSWYPLTVPQFYNPVTSLLLPVGQKDGWAGMRTLGQIKHDLGIRNK
PNTDSLYKPVVRAQRRFNTLHIPKELQKALPFKSKPKQQQAQGKTPRDLQRPSVIREPHE
RKVAALIQALSAVHNFKKKKAHMAQHAKHKDFLQQKDKQEEAKLKRQKEARKKLYRVMGQ
KDQKKQRSSLKGAAEDD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaaagtaaaagagcagaagcgacatcagcagaagcacagcgggccgaaggca
gagaggaagaagctcaggaagcagggaggcaccacagaagaagatgcacgcaaacgcaac
ccaaaagccttcgcggttcagtccgctgtgcgcatggccaagaccttccacagggctcaa
gatataaaggccaaaaaacaccacatccccctggtggaccggactcccttggaaccccct
ccaattgtgattgtagtcgttgggcccccaaaggtggggaagaccaccctgatccgctgc
ctgattaaaaacttcaccaggcaaaagcttggggacatacgaggacctgttaccattgtc
tctggtaagaagcgacgcctcactttcatggagtgtaacaatgacatcaatacaatgatc
gacctggcaaaagtagctgacctggtcttgatgttgatagatgccagctttggcttcgag
atggagacttttgagtttctcaacatctgtcaggtacacggcttccctcgtatcatgggc
gtgctgactcacctggactcattcaagaacaacaagacactgaggaagaccaagaagaac
ctcaaacatcgcttctggactgaagtctaccagggtgccaagctcttctatctgtctggg
atggtgtatggagagtatcagactcaggaggtgaagaacctcggccgcttcatctctgtc
atgaagtttcgtcctctggtgtggcagacctctcacccctatgtgctggctgaccgtatg
gaggatctgacagaccctgagatgctgagaacagaccccaagtgtgaccggacagtgtca
ctctacggctacctgcgagggacacatttgaaaaacaaaggccaggtccacattccaggt
gttggagactttggggtgggagatgtgaacttcctgccagacccatgtccactgccggac
gctcagaagaagagggcgctgaatgagaaggagcgtttgctttatgcacccatggccggt
gtgggtggggttgtgtacgacaaagacgctgtgtacatcgatcttcctgccaaccacgtc
aatcagcagcaggaggaggtgcggcccaccacagagctggtccagtctctcatcgacaca
cactccactctggatgctaagatagcagccagtaaagtgtctctgttcagcggctcggcc
tccatggacgccacagacatggagcagcagagcggagagaatgagggtcttcaggaagag
cgtgtctgggatcccaatacccagagagagaggaggaaggtggtcttcactggggaggag
gaggaggacgatgaggaagatgacggcagcggttccagcgacgacgaggatgccgacagc
gaagaaagcgaccaagaggagcaggaagacgttgaagacggcgacatagacaacctctct
acattaatcaaaaaggccagagctgaatcagaaaaggacgggacgggtggagctccacct
gtgaagaaacagaagatggagaaaaagagaggagacggagaggagagcgctgagctgccg
gcgtttgctgacagcgacgacgacctggaggtgagcgaggaggaaagcgatgaagaggca
cagaaggggagagcaggagactctgggcactgctctgaagaggatgaagaggacagtgat
gatgatgaagaggaggaagatgatgatgagtcagaagaggatgatggtgaagctgcagag
agtgagagtgaggaggaggaagagctgggggctctgcgctggaaggagggtctgcagcag
aaagcgtcagaagcatttctacggcaacaagaagctgctcccaatctgcgaaaactggtt
tacggttcagttgttgcaggggatgaggaagatgaagatgaggaggagttgggagggctg
tttcgagtcagccgccctcagaagagtaaaaagttccaggcgaactctcaggactgctcc
cgcttcaaccctgacgcctcccacaactgggatctggaggagatgatgaactctatcaaa
gactgctttgtaacaggaaagtgggaggagggccaagatgctgctacactgctgaaggag
gacgaggaactgtacggtgattttgaagatctggaaacaggagaagtccataagggtcaa
actgggcagcagaaccaggcggagcagaacagtgagaatgatgatgaagacggtgatgac
gacgatgaagccgaagagactctcatgaaggtggatgacgatgaggtccagaagaagaag
cgcatagataagaagcggcggctgaaggagcggttcgacgccgagtatgacgacggagac
gctacatacttcgatgacctgaaggaggagatgcagaagcaggcagagctgaacagagca
gagtttgaggacatggaagatgagaccagagttcagtacgaaggcttcagaccaggaatg
tacgtcagattagaaatctcctctcttccctgtgagtttgtcaccaacttcgatcctcac
taccccatcatcctcggaggcctgggctccagcgaaggcaacgtaggatacctgcagatg
cgactgaagaaacaccgctggcacaatcgcatcctgaagactcgggaccccctcatcctg
tccctaggctggcgtcgcttccagaccatccccctgtaccacatcgaggaccacaacgga
cgccaccgcctgctcaaatacacacctcagcacatgcactgtggagcctccatctggggt
cccatcacaccacaaggcaccggcttcctggctgtgcagtcagtagcaggaactaaagct
agtttccgtattgcagccacaggagtcgtcctggatctggacaagtcagtgactatagtg
aagaagctcaaactcatcggttacccctataagatctttaagaacacaagcttcattaag
ggcatgttcaacaccatgctggaagtggccaaatttgaaggtgcctctgtacgaacagtg
tcaggggtcagaggtcagatcaagaaggcgctgtcgacacctccaggagcttacagagca
acttttgaggaccggctgctcatgagtgacattgtgttcctgcgctcctggtatccactc
actgttcctcagttctacaaccccgtcacctctctgctgctgcctgtgggacagaaggac
ggctgggcgggcatgaggaccctgggccagattaaacatgacctgggcatccgcaacaag
cccaacactgactctctgtacaagccggtggtcagggcacagaggcgcttcaacaccctt
cacatccccaaagagctgcagaaggctctgcccttcaaaagcaaacccaaacaacagcag
gcccaaggaaagacccccagagacctgcagaggcccagcgtgatcagagagccccacgag
aggaaggtggcagccctgatccaagctctgagcgccgtgcacaacttcaagaagaagaaa
gcccacatggctcagcacgccaaacacaaggacttcctgcagcagaaggacaaacaggag
gaggccaagctgaagagacagaaggaggcgcgtaaaaaactgtaccgcgtcatgggccag
aaggaccagaagaagcagaggtccagtctgaagggggcagcagaggacgactaa
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