Scomber japonicus (chub mackerel): 128381783
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Entry
128381783 CDS
T09718
Name
(RefSeq) scavenger receptor cysteine-rich type 1 protein M130-like
KO
K06545
CD163 antigen
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128381783
CD molecules [BR:
sjo04090
]
Proteins
128381783
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRCR
SRCR_2
Cornifin
Ig_2
Ig_3
ig
Orf78
Motif
Other DBs
NCBI-GeneID:
128381783
NCBI-ProteinID:
XP_053197796
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Position
20:complement(58573..86648)
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AA seq
1322 aa
AA seq
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MDHLLMVLLLLCSSGLQAEDDHQPAEEEEFRLVGGASRCAGTLEVKHGEWRQVSSSFWTL
KVADVICRYLDCGSAVSTRSRNEDSDRSVWEINSDCLRSGSALRDCVSSDSSSSILELTC
SDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQGALYGE
VEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGTPE
LKQGEWRPVSYYGWTLKDADVMCRYLDCGSAVSKRRRYEASYRSVWEIRSDCLQSGSALR
DCVYSSSSHSFPSIVELTCSDSVRLVNGTSLCSGRLEVKSEQSWSSVCEADFDQQDAEVV
CRELGCGAPSVLQGALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLT
CSEPVRLVGGASRCAGTLEVKQGEWRPVADSNWYWSYSDWTLKNTDIICIYLDCGSAVSI
TSRGGSHRSGGMISSDCVQSGSDLRDCVSSSHYSSSILELTCSDSVRLVNGTSLCSGRLE
VKSEQSWSSVCEADFDQQDAEVVCRELDCGAPSVLQGSLYGEVEAPMWTKEFLCGGNESA
LLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRCAGRLEVKQGEWRSVTDSDWTVSD
SDWSLKEADVICRYLDCGSAVSTTSRNEGSDRSVWRIRSDCLQSGSALRECVSSGSSSSI
VELTCSDSVRLVNGTSQCSGRLEVKSEQSWSSVCEADFDQQDAEVVCRELGCGAPSVLQG
ALYGEVEAPMWTKEFQCGGNESALLDCRRSDSARRTCSPGKAVGLTCSEPVRLVGGASRC
AGRLEVKQGEWRPVSDSDWTMKEAAIICRYLDCGSAVSTRSRNEASDRSVWRIRSECLQS
GSALRGCISSSDYYSSIVQLTCSDLLLQPIISVSPTMDGVSGAQQQGFQVLQGSSFTISC
SVQPQYPGGSFQLTFSSSNTAYNYTQPAVNHSADFLFPAADPAHQGNYSCVYGVYVFSHN
FSSESRLLSLTVTDPDKKPYRTVLIITLVVLLVVLPLVVAAVYFILKASRGQKSDPPENT
ELDYYNPSVSRAEEEPAEEEGAQGADPGLVLDPGPGLVLDPDPGLVLDPDPGLVLDPGPG
LVLDPDPGLVLDPGPGLVLDPGPGLVLDPGPGLVLDPGPGLVLDPDPGLVLDPDPGPDPG
PGLVLDPGPGLVLDPDPGLVLDPGPGLVLDPDPGLVLDPDPGLVLDPDPGLVLDPDPGPG
SDMRFSSSVPTSSSSLSSDPDPGPGPGLDPDPGPGLSDFLHDDGADLIVTFDLVIIRSEW
TL
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctgctgatggtgttgctgttgctgtgcagctcaggactccaggctgaagat
gatcaccaaccagcagaagaggaggagttcaggttggtgggaggagccagtcgctgtgca
ggtacactggaggtgaaacacggagaatggagacaagtgagttcctctttctggaccctg
aaggtagcagatgtaatatgtagatatttggactgtggctctgctgtttcaacaagaagc
agaaatgaagactcagacagatctgtatgggagatcaactctgactgtcttcggtctgga
tctgcactgagggactgtgtatcatcagattcttcttcctccatcctggagctcacctgt
tcagactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaag
tctgagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtg
gtctgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaa
gtggaggctccaatgtggaccaaagagttccagtgtggaggcaatgagtctgctctcctg
gactgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgttggactc
acctgctcagagcctgtcaggttggtgggaggagccagtcgctgtgcaggtacaccggag
ctgaaacagggagagtggagaccagtgagttactatggctggaccctgaaggatgcagat
gtaatgtgtagatatttggactgtggctctgctgtttcaaaaagaagaagatatgaagcc
tcatacagatctgtatgggagatcagatctgactgtcttcagtctggatctgcactgagg
gactgtgtatattcatcatcatcacattcctttccctccatcgtggagctcacctgctca
gactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggaggtgaagtct
gagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgcagaggtggtc
tgtagggagcttggctgtggggctccttcagtcctccagggggcgctctatggagaagtg
gaggctccaatgtggaccaaagagttccagtgtggaggcaatgagtctgctctcctggac
tgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgttggactcacc
tgctcagagcctgtcaggttggtgggaggagctagtcgctgtgcaggtacactggaggtg
aaacagggagagtggagaccagtggctgactctaactggtactggagttactctgactgg
accctgaaaaatacagatataatatgtatatatttggactgtggctctgctgtttcaata
acaagcagaggtggctcacatagatctggagggatgatcagttctgactgtgttcagtct
ggatctgatctgagggactgtgtatcatcatcacattactcttcctccatcctggagctc
acctgctcagactctgtcaggctggtgaatgggactagtctgtgttcaggcagactggag
gtgaagtctgagcagtcgtggtcctcagtgtgtgaagctgactttgaccagcaggatgca
gaggtggtctgtagggagcttgactgtggggctccttcagtcctccaggggtcgctctat
ggagaagtggaggctccaatgtggaccaaagagttcctgtgtggaggcaatgagtctgct
ctcctggactgtagaagatcagactcagctagaagaacctgctcacctggtaaagctgtt
ggactcacctgctcagagcctgtcaggttggtgggaggagccagtcgctgtgcaggtaga
ctggaggtgaaacagggagagtggagatcagtgactgactctgactggaccgtgagtgac
tctgattggtccctgaaggaagcagatgtaatatgtagatatttggactgtggctctgct
gtttcaacaacaagcagaaatgaaggctcagacagatctgtatggaggatcagatctgac
tgtcttcagtctggatctgcactgagggaatgtgtatcatcaggttcttcttcctccatc
gtggagctcacctgctcagactctgtcaggctggtgaatgggactagtcagtgttcaggc
agactggaggtgaagtctgagcagtcgtggtcctcagtgtgtgaagctgactttgaccag
caggatgcagaggtggtctgtagggagcttggctgtggggctccttcagtcctccagggg
gcgctctatggagaagtggaggctccaatgtggaccaaagagttccagtgtggaggcaat
gagtctgctctcctggactgtagaagatcagactcagctagaagaacctgctcacctggt
aaagctgttggactcacctgctcagagcctgtcaggttggtgggaggagccagtcgctgt
gcaggtagactggaggtaaaacagggagagtggagaccagtgagtgactctgactggacc
atgaaggaagcagctataatatgtagatatttggactgtggctctgctgtatcaacaaga
agtagaaatgaagcctcagacagatctgtatggaggatcagatctgaatgtcttcagtct
ggatctgcactgaggggctgtatatcatcatcagattactattcctccatcgtgcagctc
acgtgctcagacctgctgcttcagccaatcatctctgtgtctcctaccatggacggggtc
tccggggcccagcagcaggggtttcaggtgctccagggctccagcttcaccatcagctgc
tccgtccagcctcagtacccaggaggctccttccagctcaccttcagctcctccaacaca
gcatacaactacacccagccagctgtcaatcactctgctgacttcctgtttcctgctgca
gaccccgcccaccaaggaaactacagctgtgtttatggcgtctatgttttttctcataac
ttctcctctgagagccgtctgctctctctcactgtcacagatccagataagaaaccttac
agaacagttcttatcatcacactggtcgtcctgctggtcgtcctgccgttggtcgtagct
gccgtctatttcatcctgaaggccagcagggggcagaagtcagacccaccggagaacact
gagctggattattataatcccagtgtttccagagctgaagaagagccggctgaagaggaa
ggagctcagggagcagaccctggtctggtcctagaccctggtcctggtctggtcctagac
cctgaccctggtctggtcctagaccctgaccctggtctggtcctagaccctggccctggt
ctggtcctagaccctgaccctggtctggtcctagaccctggccctggtctggtcctagac
cctggccctggtctggtcctagaccctggccctggtctggtcctagaccctggccctggt
ctggtcctagaccctgaccctggtctggtcctagaccctgaccctggtcctgaccctggt
cctggtctggtcctagaccctggtcctggtctggtcctagaccctgaccctggtctggtc
ctagaccctggtcctggtctggtcctagaccctgaccctggtctggtcctagaccctgac
cctggtctggtcctagaccctgaccctggtctggtcctagaccctgaccctggtcctggt
tcagacatgaggttctcctcatcagtgcccactagctcatcctcactctcctctgaccct
gaccctggtcctggtcctggtctagaccctgaccctggtcctggtcttagcgattttctc
catgacgacggagcggaccttatcgtgacctttgacctcgtcatcatcagatcggagtgg
acactttaa
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