Scomber japonicus (chub mackerel): 128381856
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Entry
128381856 CDS
T09718
Symbol
twnk
Name
(RefSeq) twinkle protein, mitochondrial
KO
K17680
twinkle mtDNA helicase [EC:
5.6.2.3
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sjo03029
]
128381856 (twnk)
Enzymes [BR:
sjo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128381856 (twnk)
Mitochondrial biogenesis [BR:
sjo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
128381856 (twnk)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_16
AAA_19
nSTAND3
AAA_29
nSTAND_NTPase5
TsaE
AAA_18
T2SSE
ABC_tran
AAA_11
Thymidylate_kin
RsgA_GTPase
AAA_28
AAA_30
NACHT
SRP54
RNA_helicase
AAA_23
divDNAB
AAA_33
cobW
AAA
Motif
Other DBs
NCBI-GeneID:
128381856
NCBI-ProteinID:
XP_053197855
LinkDB
All DBs
Position
20:4128076..4145996
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AA seq
846 aa
AA seq
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MLDALNRLQMWRRSLLRGTTCVLQVACRRFHPQRHFSSPMLRLVTQKLLAGATCRLRYRG
AGYFLAHLGDRAYKKDAKSTVELPVSPITVTEIKQYLRAKDIPIHDGYSCLHAPSIFTDA
ASRKDKMSLFIDKTTGQFLCKDTMVEGSWEDLQDCLEVMQAEERDSLSPHVLLGYQESVE
EQEETERELREVQRIWSSSVQFSDLPDDEAQLIKTMFQITKISNATLKKFGVRLFKPTKS
LVFPWFGGPDSSLKGVKLLSAQSTDTDTVTYHEATVPKSNSYYNLFGLPLVSRMDPEVVL
TGHELDTLAVSQATGLPSVALPRGVSCLPPILLPYLEQFRRVTLWLGGDMRSWEASKIFS
RKLGLRRCSLVRPGEERPCPVQALARGKNLSQIIKTSIPAAHKSIVSFKQLREDVYGELV
NTEQVAGVKWARFPQLNKILKGHRKGELTVFTGPTGSGKTTFISELALDLCMQGVNTLWG
SFEINNVRLAKIMLTQFAAQRLEENLEQYDYWADKFEELALYFMTFHGQQNIKTVLDTMQ
HAVYLYDINHVIIDNLQFMMGQENLSVDKFAVQDHIIGAFRKFATNTSCHVTLIIHPRKE
EDDRELQTASIFGSAKASQEADNVLILQEKKLVTTSGRRSLQVTKNRFDGDVGIFPLDFI
KTSLTYSAPVKGKLKLKKVTAKPEDGEGGSFISYRQLHLLPAASSPTSSFISYQQLHLLP
GSFISYQAASSPTGSFISYQQLHLLPAASSPTSSFISYQQHHLLPAASSPTSSFISYQQL
HLLPAASSPTSSFISYQQLHLLPAASSPTSSFISYQQLHLLPAASSPTSSFISYQLLKRG
EKEQMK
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgttggatgccttaaacagattacagatgtggaggcgttcactactgaggggcaccacc
tgtgtcctacaggtggcatgccggaggtttcacccccaaagacatttttcctcccccatg
ttgagactggtcactcagaagctccttgctggggctacgtgtcggttaaggtatcggggt
gcaggctatttcctggcacatctcggggacagagcgtataaaaaagatgccaaatcaact
gtagagttacctgtgagtcccatcaccgtcactgaaattaaacaatatctacgagccaaa
gacatccccatccacgacggctacagctgcctgcacgccccgagcatcttcaccgacgcc
gcctccaggaaggataagatgtccctgttcatagacaaaaccaccgggcagtttctgtgc
aaggacacgatggtggaaggcagctgggaggaccttcaggactgtctggaggtgatgcag
gcggaggagcgggactccctcagccctcatgtgttgctggggtatcaggagagcgtggag
gagcaggaggagacggagagggagctgagggaggttcagaggatctggtccagctcggtg
cagttctctgacctccctgatgacgaggctcagctcatcaaaactatgttccagatcaca
aagatctcaaacgcaaccctgaagaagttcggcgtgcggctcttcaaacccaccaagagt
ctggtcttcccgtggttcggcggtcccgactcctccttaaaaggcgtgaagctcctctcc
gcccagagcaccgacaccgacaccgtcacctaccacgaagccaccgtcccaaagtctaac
tcctactacaacctgttcggcctgcctctggtgagccgcatggaccccgaggtggtgctg
acgggtcacgagctggacaccctggccgtgagtcaggctacgggactccccagcgtggct
ctcccacggggtgtcagctgcctcccacccatcctgctgccttacctggagcagttcagg
cgggtgactctgtggctcgggggtgacatgcgctcctgggaggcgtctaagatcttctcc
cgtaagctgggtctgaggcggtgctcgctggtgaggcccggggaggagcggccgtgcccc
gtccaggcgctggctcgggggaagaacttgagccagatcattaagacgtccataccggcg
gctcacaagtccatcgtgtcgttcaagcagctgagagaggacgtgtacggagagctggtg
aacacggagcaggtggccggagtgaagtgggccaggttcccacagctcaacaagatcctg
aaggggcacaggaagggagagctgacggtcttcacaggtccaacaggaagtgggaagacg
acgttcatcagcgagctggccctggacctctgcatgcagggcgtgaacacgctgtgggga
agctttgagatcaacaacgtgcgtctggctaaaatcatgctgactcagtttgcggctcag
cgtctggaggagaacctggagcagtacgactactgggccgacaagtttgaggagctggct
ctttacttcatgacgttccacggacagcagaacatcaagacggtgttggacacgatgcaa
catgctgtctacctctacgacatcaaccacgtcatcatcgacaacctgcagttcatgatg
ggacaagaaaacctctcagtggacaagtttgcggtccaggatcacattatcggagcgttc
aggaagtttgccacaaacaccagctgtcacgtgactctgatcattcatcccaggaaagag
gaggacgaccgagagctgcagacggcttctatcttcggttctgctaaggccagccaggaa
gccgacaacgtcctcatcctgcaggagaagaagctggtcaccacgtccggccgaaggtct
ctgcaggtcaccaagaaccgcttcgacggagacgttggcatcttccccctggacttcatc
aagacctcgctcacgtactcggctcccgtcaaggggaaactcaaactgaagaaagtgacg
gccaaaccggaggacggggaggggggcagcttcatctcctaccggcagcttcatctccta
ccggcagcttcatctcctaccagcagcttcatctcctaccagcagcttcatctcctaccc
ggcagcttcatctcctaccaggcagcttcatctcctaccggcagcttcatctcctaccag
cagcttcatctcctaccagcagcttcatctcctaccagcagcttcatctcctaccagcag
catcatctcctaccagcagcttcatctcctaccagcagcttcatctcctaccagcagctt
catctcctaccagcagcttcatctcctaccagcagcttcatctcctaccagcagcttcat
ctcctaccagcagcttcatctcctaccagcagcttcatctcctaccagcagcttcatctc
ctaccagcagcttcatctcctaccagcagcttcatctcctaccagctccttaaaagaggg
gaaaaggaacaaatgaaatga
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