Scomber japonicus (chub mackerel): 128381863
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Entry
128381863 CDS
T09718
Symbol
srcap
Name
(RefSeq) LOW QUALITY PROTEIN: helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128381863 (srcap)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128381863 (srcap)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
128381863 (srcap)
SWR1 complex
128381863 (srcap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
6PGD_like
AT_hook
Motif
Other DBs
NCBI-GeneID:
128381863
NCBI-ProteinID:
XP_053197861
LinkDB
All DBs
Position
20:complement(4551736..4599802)
Genome browser
AA seq
3082 aa
AA seq
DB search
MCVFQHGQSRTDRKTLFLKVRQWIADRVTVNSSPASPSTSSSYPGPSPVSDWSTPRRDKS
SPLRGPHGKFVSPSSVSGYNSSSSSPPDQTTPQRPRGERHTDMAELAKHEADIEHRTQAL
KREGFWSMKRLTRLTEPPRPKVHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVMRHH
EELRQKEEKAKRDEHAKIRRVASSIAKEVRAFWSSVEKVVQYKQQSRLEEKRKKALDLQL
DFIVGQTEKYSDLLSKSLAPTRPAETAPSPPKTSVPPPVDEDDRDFEPPCEEEDDEETIE
KEEQQEGNDAESHRREIELLKEEGLLPLDQLISTLKLPTESGEEDEECSDESSSSAPEEE
DGEFTANEEDAEDEEDTIAAQEKVEGNVNHEEELDDLAKEGDMSMEELLEKYKGAYASDF
EEPSASGSKASSDSEVSGDDEVETEEDESDVESNTSSSEYQHIGLDWLVTMFEKKLNGIL
ADEMGLGKTIQTIALLAHLVTGGPHLIIVPTSVMLNWEMELKRWWPGFKILTYFGSQKER
KLKRQGWTKPNAFHVCITSYKLVLQDHQAFRRKSWRYLILDEAQNIKNFKSQRWQSLLNF
NSHRRLLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGL
VKRLHKVLRPFLLRRIKIDVEKQMPKKYEHVVRCRLSKRQRFLYDDFMAQASTRETLASG
HFMSVINILMQLRKVCNHPNLFDPRPIQSPFITKPIVFHTASLVQDALEVSPLKRCDLSM
FDLVGLESHVSRYQADIFLPRHKVSRQLIQEIAESPEPPPRPKPVRMKVNRMFQPPPKGD
NRPVLLMNKPTCSVPPAAQTPKPPPASEAAAAPAPAPVVQQVVCTVTSAPPPRPSLHPAT
QTAVRSSAPKTVLTVRPPSVPCTASVPTHPSPNPGSVMPQRVLLSPDMQARLPSGEVVSI
AQLASLAGRPVSSCQGSKPVTFQLQGNKLTLSGAQIHQVPAAPSRPVQGNVMHLVSSGVQ
HHLISQPAQVAVQTAANTHAAANTSSAAAAPAGNRLPHNASSQVPSSMVSSPGVVKIVVR
QSTGKEGGPVPTLAVAPSPRVAPQASPSLHPHANTTTPVRNTAPLQIAQRTPGPATATYT
IAPPRIPSTAPNQPQPPSQPRPVLKVVQPPPPPSTEQPAPAQVTTSSSASKSASRDTKSR
SRASLLNPSLHPGKCLVRLLALLSTCPGWPTARSSSASANWTSSTESTSTTAPPNPSTAR
RCLDFLTFLPGPRPSPAAIDPRGEWRRSGHSSCLFSQWQNKYDYWFQSRCVREAINSIEE
RLELLTDMIDRYTFAIPPVEAPQISMHCCHPPPSLSHKQAVFSSMLATQLAPLTGNLHRI
QCYMRTQFPDLRLIQYDCGKLQTLHTLLRKLKTGGHRVLIFTQMTRMLDVLEQFLNYHGH
IYLRLDGSTRVEQRQALMERFNADRRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTM
DAQAQDRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNFTTAFFKQQ
TIRELFDMNDGEKREMAVELAVPHAEEEETVNKQSTTILEQALCRAEDEEDIVAASQAKA
EQVAELAEFNENIPLDDGGEQEEVEELSKAEQEIAALVEQLTPIERYAMNFLEASLEDVC
KEELKQAEEQVEAARKGLDQAKEEGLKLHASSDDDNDEFLSSPASAEPAQPTPSRRGRKP
KDKEKIVTSTRTSGRLRGASPETEPEPPASTTPREVPERLRFGLRGRGAAKDAPAVSATP
SRTDHQKTSSSSAKLQDSSSSSSKSSKASSPARDHQTIKTRTPPNRSHPSPVPSPPTASP
PGGKQPSGGETESKNSKTSREEKEGETPNERRVSESSLESGGPAELQAKDDDSSKDQSAM
SPPSTSSRSPRKRQSADNEVLRGLVEDSPSAKVLRKLPGRLVTVVEDKEPRRRKRRGSGT
GGSSEETTAEENAAAAGFINESNKDSASPSPDNKPKSTVTKSPQDQDSTPSPSVPPPQPV
RGYPPYSPPHLSPDMPVLRNLPVRRRLETESRMAAQLGEQQLHLGRGRGANQPKRTDSTP
GKDPSSTSTESSVNSFATPLKRKRGRPPKTPHKLPEPESTSAVSPQPTSPTEEGKPPLSP
KRKRGRPRKDSTTMSDAVCEGLNSKTETTTTTTTTDVSSLSKTDTSTEPTVSSPSTETHI
ASPAPQSIKADTETDTNMEVSDPPPAPVQDSATKTQAGQTSTLNSASVQALSAPSPLPVP
VSTSAPATSIVSPAPDTLSTQVSSAPPVTGGTPKTPTTPSPSPPVTTTTTTTIISSSTPP
NIKPTLVVSTAPKTPVEPKPSVSPESAKNTSVARPAATTTITTTPNIYPSIYPSCCSIYP
SYRKVYPNYRNFLPSSCNIYPNYGNIYPSYCSIYPSCCSINPRSHKIYPNYPSYPILHPS
CLLNIYPHYSNNYPNSKQTGFLIYNYSYSSSGNTGTSIASPSLYPFPFPSSSSSSSSQFN
RYSTSTSKDQCRTYVTPNRRTVEKTVTIPPPPPPPPTPLPSLPVTTTTAPPLKPVTPVEE
TTNVPTATQASTAVSMTTTTTKAVPLVTSTTKSSPVTSQREQKSESTDVPQEVLQVPSSA
SSSSSSSSSSTVSSDKGSKEVTQEVSEASQDEPEMESSQDSARSSSPSSGSSGTSTLTRH
AHHKRTYENRHPAKRRSSSSSSDSDNGGSRKEHRLTRSAKRRLQDQEKEKGGNSRQGKKS
AHSRGSDRNASSNNANASTGGESGSDSSSVRTTRKSTGSQPSQDGKAQINSSPSLPPEPE
VLGKRCSALNAAAKLLAMKGRVDTPGHTMRRDSGAKANNNSLTLTNNKTSGSKPSTPNQS
SRSASRSTRQCPGSLVPPLELEHKRNRAEEKGSGRKSSRGKEGGDGEAQGSSRGHSACSS
MSSDGEGDGGGGGRRGERSSRSRSSSNSSQRTHSISSQNTEHRESRSRATSSGSERDRSS
ERRKSRGDRREKQEEGQRRDNSGSRRRSHRLSQQEVVTSSSGAEGTPDRVLRSVAALAAA
QARSPAASTRSSSSGQHRHNKT
NT seq
9249 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgttttccagcatggacagagcaggacagacagaaagacgttgttcctgaaggta
cgccagtggatagcagacagagtgacggtgaattcgtcccccgcctctccctccacttcc
tcctcgtatcccggcccgtcgcccgtcagcgattggtcgacgcctcgccgggacaagtcg
tctcctcttcgcggccctcacggtaaattcgtttccccttcctccgtcagcggctacaac
tcgtcgtcttcgagtccgccggatcagacgacgccgcagcgaccgcgcggagaacggcac
accgacatggcggagctggcaaaacatgaagcggacatcgagcatcggacccaggcgctg
aagcgagaaggtttctggtccatgaagcgtctcacccgcctgacggagccgccgagaccc
aaagtccactgggactacctgtgtgaggagatgcagtggctctctgcagacttcgcccag
gagaggaggtggaagagaggagtggcccgaaaggtggtacggatggtgatgcggcaccac
gaggagctgaggcaaaaagaagagaaggcaaagagagacgagcacgctaaaatcaggaga
gtcgcctcgtccatcgctaaggaagtacgagctttctggagcagcgtcgaaaaggtggtg
cagtacaagcagcagtccagattagaggagaagaggaagaaagctttggacctccagctg
gatttcatcgttggacagacggagaaatactcggacctcctcagcaaatctctcgctccc
accaggccggctgaaacggctccctcgcctcccaaaacatctgtgccgcctcccgtcgac
gaggatgaccgagacttcgagcctccgtgcgaggaagaggacgacgaggagacgatcgag
aaggaggagcagcaggaaggaaacgacgcagagagccatcgcagagagatcgagctgctg
aaggaggaagggttacttcctctggatcagctgatcagcaccctcaaactgcccacggag
tccggcgaggaagacgaggaatgctccgacgaatcctcttcatcagcgccggaggaagaa
gacggtgaattcactgccaacgaagaagacgctgaggatgaggaggatacgatagcagct
caggagaaagtagaaggaaacgtgaatcatgaagaagaactggacgacttagccaaagaa
ggtgacatgagtatggaagagctgctggagaagtataaaggagcgtacgcctcagacttc
gaggagccgtctgcgtccggctctaaagcgagctctgactcggaggtttctggagacgac
gaggtggagactgaagaagacgagagcgacgtggaaagcaacacttcctcctcagagtac
cagcacatcggactggactggttggtcaccatgttcgagaagaagctgaacggcatcctg
gccgacgagatgggactgggaaaaaccatccagaccatcgctctgctggctcacctggta
actggggggcctcacctcatcatcgtccccaccagtgtgatgctgaactgggagatggag
ctgaaacgttggtggcccggctttaagatcctcacttacttcggcagccagaaggagagg
aagctgaagagacagggctggactaaaccgaacgcgttccacgtctgcatcacgtcctat
aagttggtgcttcaggatcatcaggcgttcagacggaagtcgtggcgttacctgatcctc
gacgaggcgcagaacatcaagaacttcaagtctcagcgctggcagagtctgctcaacttc
aacagccacaggcgactgctgctgacaggaactcctctgcagaacagcctgatggagctc
tggtctctgatgcacttcctgatgcctcacgtcttccagtcgcaccgagagttcaaagag
tggttctccaacccgctgacggggatgatcgagggcagccaggagtacaacgagggtctg
gtcaagaggctccacaaggtgctgcggcccttcctgctgcggaggatcaagatcgacgtg
gagaagcagatgcccaaaaaatacgagcacgtggttcgatgccgcctctccaagagacag
cggttcctctacgatgacttcatggctcaggcctcgactcgggagacgttggccagcggt
catttcatgtccgtcattaacatcctgatgcagctccgtaaagtgtgcaaccacccgaac
ctttttgaccctcggcccatccagtcccccttcatcaccaagcccatcgtgttccacacg
gcctccctggtgcaggacgccctggaggtttccccgctcaagcgttgtgacctgtccatg
tttgacctcgttggtttggagagccacgtttctcgctaccaggcagatatcttcctgcct
cgccacaaagtcagccgccagctcatccaggagatcgctgagtctccagaaccgcctccg
agacccaaaccggtccgcatgaaggtcaacaggatgttccagcctcctcctaaaggcgat
aatcgaccggtcctcctcatgaacaaacccacctgctccgttccccctgcagctcagacc
cccaaacctcctccagcctctgaagccgcagcagctcctgcacctgctcctgtagttcaa
caagtggtgtgcacggtgacgtctgctccccctccccgcccctcgttgcaccccgccact
cagaccgcagtgagatccagcgctcccaaaaccgtgctgacggtgcgtcctccgtctgtc
ccctgcaccgccagcgttcccactcatcccagtccaaaccccggcagcgtcatgcctcag
agagtcctgctcagccctgatatgcaggccaggctgccctctggcgaggtagtgagcatc
gcacagcttgcctcgttggcagggcggccggtgtcatcgtgtcagggcagtaaacccgtc
accttccagctccagggcaacaagctgactctgtctggagcccagatccaccaagtccct
gctgctccttcacgcccagttcaaggtaatgtgatgcacctggtgtcgagcggtgtgcag
catcacctcatcagccagccggcccaggtggccgtccagaccgccgccaacacccacgct
gctgcaaacacctcgtctgctgccgctgctcccgccgggaatcggctgcctcacaacgcg
tcctcgcaagtgccgtcgtccatggtgagcagccccggcgtcgtgaagatcgtggtgcgc
cagtcaacaggcaaggagggcgggcccgtgcccactctggccgtggccccttcccctcgt
gttgcccctcaggcttccccttccctgcacccccacgccaacaccaccacccctgtccga
aacaccgccccgctgcagatcgctcagcgcacccccggccccgctaccgccacctacacc
atagcccctcccagaatccccagcaccgccccgaaccagccccaacccccctcccaacct
cgtcctgtcctcaaagtagtgcagccccctcctccgccgagcacggagcagccagctcca
gctcaggtgacgacctcgtcttcagcgtctaagtcagcgtctcgtgacaccaaaagtcga
agccgagcatcgctgctaaatccttccctccaccccggaaagtgcctcgtccgcctcctc
gctctcctttccacatgtcctggctggccgacagcgagaagcagcagcgcctcagcaaac
tggacttcatccaccgagtcaacgagcaccactgcgccgccaaacccgtctacggcaagg
aggtgtttagacttcctgacgttcctgccgggtcctcgcccgtcgccggccgccatcgac
ccgcggggcgagtggaggcggtcgggtcacagcagctgtctgttctcccagtggcagaac
aaatacgactactggttccagagccgctgcgtccgagaggcgataaacagcatcgaggag
cggctggagctgctcaccgacatgattgacaggtatacatttgcgattcccccggtagag
gctcctcagatctcgatgcactgctgccaccctcctccgtctctgagccacaagcaggcg
gtgttctcgtcgatgctcgccacgcagctcgctccgctcactgggaatctccaccgcatc
cagtgttacatgaggacccagttcccggatctgaggctcatccagtacgactgtggaaag
ctgcagacgctccacactctgctgaggaagctgaagacgggcggacacagagtattgatc
ttcactcagatgacccgcatgttagatgtgttggagcagttcctcaactaccacggacac
atctacctccgcctggacggcagcacgcgcgtggagcaaagacaggctctcatggagcgc
ttcaacgccgaccgtcggatcttctgcttcatcctgtcgactcgtagcggaggcgtcggg
gtgaacctgacgggagccgacacggtggtcttctacgacagcgactggaacccgaccatg
gatgctcaggctcaggaccgctgccaccgaatcggtcagacacgagacgtccacatctac
aggctgatcagtgaacgcaccgtggaggagaacattttaaagaaagccaaccagaagagg
atgctgggagatatggcgatcgagggaggaaacttcaccacggccttcttcaaacagcaa
accatccgagagctgtttgatatgaacgacggagagaagagagagatggcggtggagctg
gcggtgccgcacgctgaggaggaagagacggttaacaaacagagcaccaccatcctggag
caggctctgtgtcgagcggaggacgaggaggacatcgtagccgcctctcaggccaaagcg
gagcaagtggcggagctggcggagtttaacgagaacataccgctggacgacggaggggag
caggaggaagtggaggagctctccaaggccgagcaggaaatagctgctctggtggaacag
ctcactcccattgaacgttacgccatgaacttcctggaagcctcattagaagacgtttgc
aaagaagagttgaaacaagctgaggagcaggtggaggctgccaggaaaggtctggaccag
gccaaagaggaaggcctgaagctccacgcctcctccgacgacgacaacgacgagttctta
tcatcgccggcttccgcggagcccgctcagccgactccgtcccgccgaggccgcaaaccc
aaggacaaagaaaagatcgtcacctccacgaggacgagcggccggctgcgaggagcgtcg
cccgaaaccgagcccgagccgcccgcttcgacaacgccgagagaagtgcctgaaagactc
cgcttcggtctacgaggacgaggagccgccaaagacgcccccgctgtgtctgccaccccg
tcccgtacggatcatcaaaaaacctcctcgtcgtcagcgaagctccaagactcctcctcc
tcctcctccaaatcctcaaaagcgtcatcgcctgccagagatcaccaaaccatcaaaacc
aggactccgccgaaccgctcccatcccagtccagtgccttcccctccgacagcttctccc
cccggagggaaacaacccagcggcggggagacggagagcaagaactctaaaaccagcaga
gaggagaaagagggggagacgccgaacgagaggagggtgtcggagtcctcgctggagtcc
ggcggcccggcggagcttcaggcaaaagacgacgacagcagcaaagaccaaagcgccatg
tctccgccttccaccagctccaggtcgcctcgcaagcgtcagtcggcggataacgaagtc
ctgcggggtttggtggaggattcgccgtcggctaaagtcctgcggaagctcccggggcgt
ctggtcaccgtggtggaggacaaagagccgaggaggaggaagaggcgagggagcggcacc
ggcggttcctcggaggagacgacggcggaggagaacgccgccgccgccgggttcatcaac
gagtccaacaaagacagcgcctcgccgagccccgacaacaaacctaaaagtactgttacc
aaatctcctcaggaccaagactctaccccgagcccctccgtgcccccgccgcagcccgtc
agaggttaccccccgtactccccgccccacctctcgcccgacatgcccgtgctgaggaac
ctccccgttcgccgccggctggaaacagaatcccgcatggccgctcagctgggagagcag
cagctgcacctggggaggggacgaggggcaaaccagcccaaaagaacagactcgacgccg
ggcaaagacccctcctcaacctccacggagtccagcgtgaactcctttgcgacacccttg
aaaagaaagaggggccggccccctaagactccccataaattacctgagcctgaaagcaca
tcagctgtttccccgcaacccacatcgccgacggaggaggggaaaccgcccctatccccg
aaacgtaagaggggtcgaccccgcaaagactcgacgacgatgtcagacgctgtttgtgaa
ggactgaactctaaaacagagaccaccaccaccaccaccactactgacgtatctagttta
tcaaaaactgacactagcacagagccgacagtctcatctccctctacagagacccacata
gctagtccggccccccagtctatcaaagctgacaccgaaacggacaccaacatggaggtt
tcggaccctcctccagctccggttcaggactcggcaacaaaaactcaagcgggtcaaact
tccaccttaaattcagcttcggtccaagcactctctgcaccttcaccccttcctgtgcct
gtgtccacatcagccccagctaccagtattgttagtccagctccagatactctatcaacc
caggtttcgtctgcacccccggtcactggaggaacccctaaaacccccacaaccccctcc
ccgtccccacctgtcaccaccaccaccaccaccaccatcatctcttcttctactcctccc
aatataaaaccaacacttgtggtttcaactgctcctaaaactcccgtcgagccaaaacct
tcagtttcccccgaatctgccaaaaacacctcagttgccagaccagctgctaccaccacc
atcaccaccacccccaacatctaccccagcatctaccccagctgctgcagcatctacccc
agctaccgtaaagtctaccccaactaccgtaacttcctgcccagctcctgtaacatctac
cctaactacggtaacatctaccccagctactgcagcatctaccccagctgctgcagcatc
aaccccaggtcccataagatctaccccaattaccccagctaccctatcctccaccccagc
tgcctcctcaacatctacccccactacagcaacaactaccccaactccaaacaaaccggt
ttcctcatctacaactacagctacagctcaagtgggaacacaggcacaagtatcgcctcc
cccagtctgtaccccttccccttccccagcagcagcagcagcagcagctcccagtttaac
cgctacagcaccagcaccagcaaagaccagtgcaggacctacgtcactcccaacagaagg
actgtagaaaagactgtcaccatcccccctcctcctcctccacctcctacacccctccca
tccctcccagtaacaactaccacagctcctccattaaaaccagtcacaccagtagaggag
accacaaatgttcccacagccacacaagccagtacagctgtctccatgacgacgacgacg
actaaagcagttcctcttgtgacttccaccaccaaatcctctccagttacttcccaacga
gaacagaagtccgagtcgacagatgttcctcaagaggttctccaggttccctcatctgct
tcttcttcttcttcttcttcttcttcttctactgtttcatcagataaaggatcaaaagaa
gtaacgcaggaggtgtcggaggcatctcaagacgagccggaaatggaaagcagccaggac
tccgctcgctcctcctctccgtcgtcgggctcgtcgggaacgtcgacgctcactcgccac
gctcaccacaagaggacgtacgagaaccgacacccggccaagaggaggtcgtcgtcttcc
tcgtccgactccgataacggcggcagcaggaaggagcaccggttgactcgctcggccaaa
cgcagactacaagatcaagagaaggagaaagggggcaacagcaggcaagggaagaaatcc
gctcacagccgcggctcggatagaaacgcctcgtcgaacaacgccaacgcgtctacaggc
ggagaatccggcagcgactcctcctccgtcaggacgaccaggaagtccaccggatctcaa
ccttcgcaagacggcaaagctcagattaacagctcgccctcgttgcctcctgagcccgaa
gttttggggaaaaggtgctcggccctcaacgcggcggctaagctcctggcgatgaaaggc
cgagtggacacgcccggtcacacgatgcggagagactctggagccaaagccaacaataac
tcgctaacgctaacgaataataaaactagcgggagcaaaccgtcgacgccgaatcagtcg
agccgctccgcttcccgctccacccgacaatgccccgggtcgctcgtgccccctttggaa
ctcgagcacaagaggaacagagcggaggagaaaggaagcgggaggaagtcgtcgagagga
aaggaaggaggagatggagaggcgcaggggtcgtcgcgaggtcacagcgcctgcagcagc
atgagcagcgacggcgagggcgacggaggcggcggcggacgaagaggcgagcgaagcagc
cggagtcgaagcagcagcaacagcagccagcggactcacagcatcagctcccaaaacacg
gagcacagggagtcccgatcccgagccacttcctccggcagcgagcgagaccgcagctcg
gagcgccggaagagccgaggcgacagaagggagaaacaggaagagggtcagcggagggac
aacagcggcagccggcggcggtctcacaggctctcgcaacaggaagtggtgaccagcagt
tcgggagcggaggggacgccggatcgggtgctgaggagcgtggcggcgttggcggcggct
caagcgagatcgccggcggccagcacccgctcctcgtcgtcggggcaacaccgccacaat
aagacatga
DBGET
integrated database retrieval system
