Scomber japonicus (chub mackerel): 128381887
Help
Entry
128381887 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128381887
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128381887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
LRR_6
NOD2_WH
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128381887
NCBI-ProteinID:
XP_053197882
LinkDB
All DBs
Position
20:complement(7837447..7842916)
Genome browser
AA seq
1034 aa
AA seq
DB search
MEQKDAADKTDNASPVLVSVPSIQAWVHDFHPSYSAQTGGSVVAPSIIGSTVEGSININI
ISIAQEEALNRDIEDICVALQPQNNKIVGCQKKLKCTLKRRFGHLHQGTAKEAKKISLKK
IYTELYITEGGSGEVNKEHEVRQIEMTSRMQVAHEKSISCNDLYALQEQNHPIRTVITRG
VAGIGKTVSIKKFTLDWAEERANTHLEFVFPFCFRELNRMKKEWSLVELVCAFYPETKDT
GIFSNGGNKMLFILDGLDESRLSLDFHNSEIMPDVTQQTTIAVLLTNLIRGSLLPLALVW
ITSRPVASSQIPLEHIDLVTEVRGFNNPQKDEYFKRKISDEGLANRVITHVKSCRSLHIM
CHIPVFCCMAATVLEKKLAKADSKDTPKTLTQMYIHFLSLYVDSTNKSPPVRRESNADYM
RDNLISLGKLAFKELEKGHLIFYESDLKRNGIDVAQASMFSGVYTEIFNEELTLGEEKMF
CFVHLSVQEFFAALYVFLTFNNDNLNVLVKKSSVSRRFPFRDSSELILYKEAVEKALRCE
NGHFDIFLRFLLGLSLESNQRLLKHLMTNNRTNPKTRTEIIKHIKEKIKSSPSPDRCLNL
FHCLNELNDHSLVEEIQSFLSSGSLNRDKLSPSQWATLVFVLLTSEEELSVFELSNYTRS
EEALLRLLPVMKTARVANLNACYLTAKCCDRLANSITSSKVRELDLSNNNLTDAGLKQLS
TGLKNSKLQTFRLKSCNLTADSSEVLVSVISSASCQLKELDLTDNDFLDVGVKKLSGGLG
SPHCKVEKLILSLCRVTEEGCIFLGSALNSSRLRELDLSYNHPGDAGLELLSALLDDPQC
SLEKLSVEQCGESRVQPGPKKYTSQLTLDPNTAHIDLTLAEGNRKATRWTKQPYADHPER
FDFSRQVLCKEGLTGRCYWETEWSGRALIGVAYRRMCRKGEGDECRLGRNNSSWGLNCNK
DGYRAFHKGVSIVINIPSSSNKVGVYLDWSAGTVSFFRVSCGALTLLHTFHTTFTEPVYP
GFHLGWVDSTVYLC
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaaagatgctgctgataaaacagacaatgcctctccagtcttggtgtcagtt
ccctctattcaagcttgggttcatgatttccatcccagctattccgctcagactggaggc
agtgtggtcgcgccttccatcatcggctctacggttgaaggcagcataaacatcaatatc
atctcaatagcccaagaagaagcattaaaccgtgacattgaagacatctgtgtggctcta
cagccacaaaataataagattgtaggatgtcaaaagaaactaaaatgtactctaaagagg
aggtttggccatttgcatcaagggacggcaaaagaagcaaaaaaaatctcactcaaaaag
atctacacagaactctacatcaccgagggaggaagtggggaagtcaataaagagcatgag
gtgagacagatcgagatgacatccaggatgcaggtggcccacgagaaatcaatcagctgc
aacgacctctatgctctacaggaacaaaaccacccgataagaactgtgatcacaagagga
gtcgctggcatcggaaaaaccgtatctatcaaaaaatttactctagactgggctgaggag
agagcaaacacacacctggaatttgtatttcccttctgtttccgagagctgaaccggatg
aaaaaggagtggagtctagtggagcttgtctgtgccttttaccctgaaacaaaagacaca
ggaatctttagcaatggtggaaacaaaatgctcttcatcctggatggcctggacgagagc
cgtctatctttggacttccacaacagtgagataatgcctgatgtgacacagcaaaccacc
atagctgtgcttctgaccaacctcatcaggggatcactgcttcctttggcacttgtttgg
ataacatcccgcccagtagcttccagtcagatccctctggagcacattgatcttgtgaca
gaagtccgcgggttcaacaacccccagaaagacgagtacttcaagaggaaaataagtgat
gagggcttagcaaacagggtaatcacacatgtgaaatcctgcaggagtctccacatcatg
tgccacataccagttttctgttgtatggcagcaactgttcttgagaagaagttggcgaaa
gcagacagcaaagacacaccaaagactctcactcaaatgtacatccacttcttgtccttg
tatgtggacagcacgaacaagagcccgcctgtaagaagagagtcaaacgctgactacatg
agagataacctcatctctttgggtaaactggcctttaaagagctggagaaaggtcacctg
atcttctatgagagcgaccttaagcgaaacggtatagatgtcgcacaggcatcgatgttc
tcaggggtctacacagagatcttcaatgaggagctgacactgggcgaggagaagatgttc
tgctttgtacatctgagcgtccaggagttctttgctgcgttgtatgtttttctcacattc
aacaacgacaacttgaacgtcttggtcaagaagtcatccgtgtcaagacgtttcccattc
agagattcgtcagagctcattctctacaaagaagcagtggaaaaggctttgcggtgcgag
aatggacattttgacatcttcctgcgctttcttttgggcctgtctctggagtccaatcag
agactgttgaaacatcttatgaccaacaacagaacaaacccaaagacaagaacagagatc
atcaaacacatcaaggagaagatcaagtcaagcccatccccggacagatgcctcaatctg
tttcactgcctgaatgagctgaacgaccactctctggtggaggagattcagagctttctc
agctcaggaagtctgaacagagacaaactctcaccttcccagtgggccactctggtgttt
gtgttactgacttcagaggaggagttgagtgtgtttgaactgagcaactacaccaggtca
gaggaagctctcctgaggctgcttcctgtcatgaaaacagccagagtagcaaatctaaat
gcatgttacctcactgcaaagtgctgtgacaggttggccaacagcatcacctcatccaaa
gttagagagctggacctgagtaacaacaacctgacagatgcaggactgaagcagctctct
actggactgaaaaacagcaaactacagacattcagactgaagagctgcaacctaacagca
gacagctctgaagtcctggtctcagttatcagctcagcctcctgccaactgaaagagctg
gacctcactgacaatgactttctggatgttggagtcaaaaagctctctggtggattgggg
agtcctcactgtaaagtggaaaaactcattctgtccctatgcagagtgacagaggaaggc
tgcattttcctgggatctgctctaaactcctcccgtctgagagagctcgacctgagctac
aaccacccaggtgacgcaggcctggagctgctgtccgccctgctggatgacccacaatgc
agtcttgagaaactcagtgtcgaacaatgtggtgaatccagagttcagccgggtcccaag
aaatacaccagtcaactcaccctggacccaaacacagctcacatagacctcactctggcc
gaagggaacaggaaagcaacacggtggaccaagcagccatatgcagatcaccctgaaaga
ttcgatttctcgagacaggtgttgtgcaaggagggtctgacaggacgctgttactgggag
acggagtggagcggaagagctttaataggtgtggcctatagacgaatgtgcaggaaggga
gagggtgatgaatgcaggttaggccgaaataactcttcctggggcctgaactgcaacaag
gatggttacagagcttttcacaaaggtgtaagcattgtcataaacatcccatccagctcc
aataaggtgggagtctatctggactggtcagcagggaccgtgtccttcttcagggtctct
tgtggtgcactgactctcctccacaccttccacaccaccttcaccgaacctgtgtaccca
gggtttcatcttggctgggtggactccacagtgtacctatgctaa
DBGET
integrated database retrieval system
