Scomber japonicus (chub mackerel): 128381894
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Entry
128381894 CDS
T09718
Symbol
sgca
Name
(RefSeq) alpha-sarcoglycan
KO
K12565
alpha-sarcoglycan
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128381894 (sgca)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
DUF3377
FAM163
TMEM154
Motif
Other DBs
NCBI-GeneID:
128381894
NCBI-ProteinID:
XP_053197888
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Position
20:complement(8340088..8350191)
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AA seq
467 aa
AA seq
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MVSQASQRMLSDGMSPFSTPAGKSVLSTRSRFQEYQPLGVLQKLPDVANKTNDIENIDAD
IFTSVSAYGRKSCDIHSRLCAVTVCGANAEIKFTIPVGKLFTYELMRETFQNDFEPLSKL
FAGRLYDDPMIFKCNRQNYPDLPEWLRFTQRHPYDNGFLYGTPVTPGRSTIEIYAINKRS
YETARHILVIKVAAERILPYQAEFFIKLRDIEKVLPSTVQTEIKKDTERLWQTQTLSIIN
ITNALDRGGRVPLPLGGHFEGVYVKVGSEMFFSECLQRVLKPEHQEQCASGAEVKVPGEC
NFCGIASNCITWCKTELFDLSVPVLPPPVPTMGSGILEDGGYFNPPESPPSRDYFPDYIV
TVIVPLILAIILCSLLAYIMCCRREGVNQRNAKTDHIQLYHHHTILGNTDELRVMAGNRG
IPGLPLSTLPMFNSRTGERASPLQSDSPSIPLIMAQHDPYSATLPRK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtcaagcgtcgcaacggatgctcagcgacggcatgtctcctttctcaactccc
gctggcaaatctgtattatccacccgcagccgattccaggagtaccagcctcttggggtc
ctccagaagttaccagacgttgccaataaaactaatgatatcgagaacatagacgcagac
atcttcacctctgtctctgcatacggcaggaagtcatgtgacattcacagcagactttgt
gctgtcactgtgtgtggggccaatgcagagatcaaatttaccattcctgtggggaagtta
tttacatacgagctgatgagagagactttccagaatgactttgaacccttgtcaaaactc
ttcgctggccgcttgtacgatgaccccatgatttttaagtgcaacaggcagaattatcca
gacctcccagagtggctccgcttcacgcaaaggcacccttatgataacggcttcctgtac
gggacaccagtgactccaggaagaagtacaattgagatttatgccatcaacaaacggagc
tatgaaacagccagacacattctcgtaatcaaagtagctgcagagaggatcttgccctat
caagctgagttcttcatcaaattgagagatattgagaaagtgctgccctctactgttcag
actgaaataaagaaggatacagagaggctgtggcagacacagactttgtcaattatcaac
atcactaacgctcttgaccgcggcggcagagttcccctccctcttggaggccacttcgag
ggtgtgtatgtgaaggtggggtcagagatgtttttctcagaatgtctccagagggtgctg
aagccagagcatcaggaacagtgtgcatcaggggcagaagtcaaagtccctggagagtgt
aacttctgcggcattgccagcaactgtatcacctggtgcaagactgagctgttcgatctg
agtgtgccggttctacctccaccggttccaactatgggctcagggattctggaggatgga
ggttacttcaaccctcccgagtctccaccgagcagagactatttcccagactacattgtg
acagtgattgtgcccctgatcctggccatcatcctgtgtagcttgctggcctacatcatg
tgttgcagacgagaaggagtcaaccaaaggaatgcaaagacagaccatattcagctgtac
caccaccacactattctcggaaacacagatgagctaagggtcatggctggaaaccgtggt
attcctggtcttcctctatccacgctgcccatgttcaacagcagaactggggagagagca
tcaccgctgcaatctgacagccccagcatccccctcatcatggcccagcatgatccctac
agtgccacactgcccaggaagtga
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