Scomber japonicus (chub mackerel): 128381899
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Entry
128381899 CDS
T09718
Name
(RefSeq) integrin alpha-M-like
KO
K06461
integrin alpha M
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04145
Phagosome
sjo04514
Cell adhesion molecules
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128381899
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128381899
09142 Cell motility
04810 Regulation of actin cytoskeleton
128381899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128381899
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128381899
04515 Cell adhesion molecules [BR:
sjo04515
]
128381899
04090 CD molecules [BR:
sjo04090
]
128381899
00536 Glycosaminoglycan binding proteins [BR:
sjo00536
]
128381899
Membrane trafficking [BR:
sjo04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
128381899
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128381899
Cell adhesion molecules [BR:
sjo04515
]
Integrins
Integrin alpha subunits
128381899
CD molecules [BR:
sjo04090
]
Proteins
128381899
Glycosaminoglycan binding proteins [BR:
sjo00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
128381899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
ITGAX-like_Ig_3
FG-GAP
VWA_2
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP_3
VWA_CoxE
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
128381899
NCBI-ProteinID:
XP_053197893
LinkDB
All DBs
Position
20:15970482..15984173
Genome browser
AA seq
1136 aa
AA seq
DB search
MDWIISTTVFLSVLKAALCFNIDPVAWKTVSNSAAGFGYQVVQRQSDLLVSAPLEQLSPN
ERGQIFKCSTKVCTPVRVPVPSFAVNMSLGLTMTSDPNTQKTLACGPTIPKDCKSITQYS
GVCFEIDSSDRVGSPVPSSIEECRTIADIAFLLDGSGSVEYYDFERMKNFVKSVVKSFPG
KDTKFAIAQFSSRVVIHYYFNTLKMDDWESQINSIRQLTGGTHTTTAIREVVNNVFSTYR
GSRSDVKKILIVITDGESNDGGDLQGAANLAENKKIVRFAVGVGDAFTKPTAKQELYTIA
SSRDKVFQVSNFEALDVIRQNLQDQIFSIEGSQTGGESLKMEMAQSGFSAAYVPPGSTQG
IQMAIVGANQWRGGFKEYNTSKMFNSYQPLDIELDSYLGYSMAVANTLSGPLTILGAPRY
KHRGIVMSVFASSIGETIDPFNWQFKIGEYFGAVVCAMDVNRNSYTDLVLISAPMYMDSD
REGRVYVCSLSRLKIECHFDSPLVLRGDASEQGRFGSSLAVLPDLNQDGFNDLAVGAPLE
NDGQGSIYIFHGERGGGGRISPAYSQRIASSEVKQGLKFFGMSISQSSFDRSNDNLPDLA
VGSKGTVVLLRSRPIVLVEASVTFNPNQIQTQNSDCSTPLDNTAKICFTMTKHSVIDTAR
AIINYTFTLDAQRKVPNNRAYIRDKQREQTGSLTLTFEQKCNDVKFLIQACPDDSLNPVN
NELQFIFDGLPSSSGLRPSLAQQAQTTTFHPLVFEINCGTDNECVDKLKVDFNFTGSSEV
KVGMDELLDVTVSVENSHENSYNSRVILTYPPGLSYRKFTSLKGRIECNSLDSGAGLSQG
RTDCTIDKPILKSNAKVLFIVSYGIDTTYKFDRTLIITANATSGNQHASGSELYKKNTID
VKYSIYATIESSLTYTNFSHGKNDLQKPVHQPIVLANDNRALNLTMVIRVPVKLGDKDIW
VNSNSLQIPDCQRDTDEKPTVTNFVAEIQKNKSVDCSVAWCRVFKCNRFMGSLESQTYTI
SANLSSEWIEQIGLKSARFLLTSTATLEFDRNQYIFFLPGSNHNPLVHKIETQVEVYPEP
DFTKEIIGGSLGGLALLSLLTAGLMKAGFFNSKYKNMMNEEQEAGEGAEGGEPAPE
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atggactggatcatttctaccacagtgtttttgtcagtgttaaaagctgcactgtgcttc
aatattgatcctgtggcttggaagaccgtgagtaactctgctgcaggttttggataccag
gtggtgcaaagacagtcagatttgctggtcagtgccccccttgaacaactttcaccaaat
gaaagagggcaaatatttaaatgttccaccaaagtctgcactccagtacgagtaccagtg
ccaagttttgcagtcaacatgtcccttggtttgacaatgacaagtgatcccaacacacaa
aaaactttggcatgtggtccaaccatcccaaaggactgcaaaagtatcacccagtatagc
ggtgtgtgctttgagatagactcttctgatcgcgttggatcccctgtgccttcttctatt
gaagagtgtcgaactatagcagacattgcatttctgttggatggctcaggcagcgtagaa
tattatgattttgagagaatgaagaattttgtgaaaagtgttgtcaagtcattcccagga
aaggatacaaagtttgccatcgcccagttctcctcgagagttgtcatccattattacttc
aatactttaaaaatggatgactgggaatctcaaatcaatagtataagacagttaactgga
gggactcacacaactacagccatcagagaagttgtcaacaacgtcttctcaacatataga
ggttccaggtcagatgttaagaagattttaatagtcattacagatggagaatctaatgat
gggggtgatttgcaaggtgcagcaaatttagctgaaaataaaaagattgttcgatttgct
gttggggtgggggatgcatttacaaagcccacagcaaaacaggaactgtacaccattgca
tcttcacgagacaaagtgtttcaagtgtcaaactttgaagctcttgatgtaatacggcag
aacttgcaggaccaaatcttctctatcgaaggatctcaaactggtggagagtcactgaaa
atggaaatggctcaaagtggattcagtgcagcttatgtgcctccgggttctacacagggg
attcagatggctattgttggtgccaaccagtggaggggaggcttcaaggaatacaataca
agcaagatgttcaactcttatcagcctttggacatagagcttgacagttatctgggttac
tccatggcagtcgccaacacgttgtctggtccactgacaattctcggtgctccaagatat
aaacacagaggaattgtgatgtcggtttttgcaagcagtatcggtgaaacaattgatccc
tttaattggcagttcaagattggtgaatattttggtgcagtggtttgcgccatggatgtg
aatcgtaacagctacactgacctagtcctcatatctgccccaatgtacatggacagtgat
agagagggaagagtttatgtttgcagcctatcacgtttgaaaattgagtgtcacttcgat
tctccattagtactgagaggggacgcatctgaacaaggaagatttgggtcttctcttgct
gtactcccagaccttaaccaagatggtttcaatgacttggcagttggagcacctttggag
aatgacggacaaggtagcatttacatcttccatggtgaaagaggaggaggaggaaggatt
agtcctgcttactcacagagaattgcttcctctgaggtaaagcaaggactgaagttcttc
gggatgtcgatcagtcagtcttcttttgaccgtagtaatgacaatctgcctgatttagcg
gtgggttcaaagggaacagttgtcttactcaggtcaaggcccatagtactggtggaagct
tcagtgacattcaacccgaaccaaatccaaacccaaaactcagactgctcaacaccactg
gataacacagctaaaatctgctttaccatgaccaaacactctgtcattgatacagctaga
gcaattattaattacactttcacactggatgcccaacgcaaggtcccaaataaccgagct
tacattagggacaaacaacgagagcagaccggatcattaactcttacctttgagcaaaaa
tgcaacgatgtgaaattcctcattcaggcctgtccagatgattctctgaatccagttaac
aatgagctccaattcatctttgacggtttgccttctagctcaggtctcagaccaagtcta
gcccagcaggctcagacaacaacttttcatcctttggtgtttgagatcaactgtggcact
gacaacgagtgtgtagataagctgaaagtggatttcaacttcactggatcctctgaggtt
aaagtaggcatggatgaactgctggatgtcaccgtctcagtggaaaacagtcatgaaaac
tcctacaacagccgtgtcattctcacttacccacccgggctttcctacaggaagtttaca
tcactgaagggaagaattgaatgcaactccttggacagtggagctggcttatctcaggga
aggacagactgcactattgacaagcctattttgaagagcaatgctaaggttctcttcatt
gtatcctatgggatcgacaccacttataaatttgacaggacgttaataatcactgcgaat
gccaccagtgggaatcagcacgccagtggaagcgaactttacaaaaagaatacgattgac
gtgaagtacagcatttatgctacaattgaaagttccctcacctacaccaatttcagtcat
ggaaagaatgatttgcagaaaccagtccatcaaccaattgtgcttgcaaatgacaacaga
gcactgaatttaactatggtgatcagggtgccagtaaagcttggtgataaagacatttgg
gtgaattccaacagcttgcagattccagactgccaaagagacacagatgaaaaacctaca
gtcacaaattttgttgctgagatacaaaaaaataagtctgtggactgctctgtagcctgg
tgcagagtgttcaagtgcaaccgattcatgggaagcctggagagtcaaacatacacaatc
tctgctaaccttagttcagaatggatagagcagattggacttaagtctgccagattcctc
ttgaccagtacggccactctggagtttgacagaaaccagtatattttctttttaccaggg
tcaaatcacaaccctctggttcacaagattgagacacaggtagaagtgtatcctgaacca
gacttcaccaaagagatcatcggaggatccctgggagggttggctctactcagtctactc
actgctggcctgatgaaggctggattttttaacagtaaatacaagaacatgatgaatgag
gaacaagaggctggggaaggggctgagggaggcgaacccgcaccagaataa
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integrated database retrieval system