KEGG   Scomber japonicus (chub mackerel): 128381899
Entry
128381899         CDS       T09718                                 
Name
(RefSeq) integrin alpha-M-like
  KO
K06461  integrin alpha M
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04145  Phagosome
sjo04514  Cell adhesion molecules
sjo04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    128381899
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    128381899
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    128381899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128381899
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sjo04147]
    128381899
   04515 Cell adhesion molecules [BR:sjo04515]
    128381899
   04090 CD molecules [BR:sjo04090]
    128381899
   00536 Glycosaminoglycan binding proteins [BR:sjo00536]
    128381899
Membrane trafficking [BR:sjo04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    128381899
Exosome [BR:sjo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   128381899
Cell adhesion molecules [BR:sjo04515]
 Integrins
  Integrin alpha subunits
   128381899
CD molecules [BR:sjo04090]
 Proteins
  128381899
Glycosaminoglycan binding proteins [BR:sjo00536]
 Heparan sulfate / Heparin
  Adhesion molecules of cell surface
   128381899
SSDB
Motif
Pfam: VWA ITGAX-like_Ig_3 FG-GAP VWA_2 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP_3 VWA_CoxE vWA-TerF-like
Other DBs
NCBI-GeneID: 128381899
NCBI-ProteinID: XP_053197893
LinkDB
Position
20:15970482..15984173
AA seq 1136 aa
MDWIISTTVFLSVLKAALCFNIDPVAWKTVSNSAAGFGYQVVQRQSDLLVSAPLEQLSPN
ERGQIFKCSTKVCTPVRVPVPSFAVNMSLGLTMTSDPNTQKTLACGPTIPKDCKSITQYS
GVCFEIDSSDRVGSPVPSSIEECRTIADIAFLLDGSGSVEYYDFERMKNFVKSVVKSFPG
KDTKFAIAQFSSRVVIHYYFNTLKMDDWESQINSIRQLTGGTHTTTAIREVVNNVFSTYR
GSRSDVKKILIVITDGESNDGGDLQGAANLAENKKIVRFAVGVGDAFTKPTAKQELYTIA
SSRDKVFQVSNFEALDVIRQNLQDQIFSIEGSQTGGESLKMEMAQSGFSAAYVPPGSTQG
IQMAIVGANQWRGGFKEYNTSKMFNSYQPLDIELDSYLGYSMAVANTLSGPLTILGAPRY
KHRGIVMSVFASSIGETIDPFNWQFKIGEYFGAVVCAMDVNRNSYTDLVLISAPMYMDSD
REGRVYVCSLSRLKIECHFDSPLVLRGDASEQGRFGSSLAVLPDLNQDGFNDLAVGAPLE
NDGQGSIYIFHGERGGGGRISPAYSQRIASSEVKQGLKFFGMSISQSSFDRSNDNLPDLA
VGSKGTVVLLRSRPIVLVEASVTFNPNQIQTQNSDCSTPLDNTAKICFTMTKHSVIDTAR
AIINYTFTLDAQRKVPNNRAYIRDKQREQTGSLTLTFEQKCNDVKFLIQACPDDSLNPVN
NELQFIFDGLPSSSGLRPSLAQQAQTTTFHPLVFEINCGTDNECVDKLKVDFNFTGSSEV
KVGMDELLDVTVSVENSHENSYNSRVILTYPPGLSYRKFTSLKGRIECNSLDSGAGLSQG
RTDCTIDKPILKSNAKVLFIVSYGIDTTYKFDRTLIITANATSGNQHASGSELYKKNTID
VKYSIYATIESSLTYTNFSHGKNDLQKPVHQPIVLANDNRALNLTMVIRVPVKLGDKDIW
VNSNSLQIPDCQRDTDEKPTVTNFVAEIQKNKSVDCSVAWCRVFKCNRFMGSLESQTYTI
SANLSSEWIEQIGLKSARFLLTSTATLEFDRNQYIFFLPGSNHNPLVHKIETQVEVYPEP
DFTKEIIGGSLGGLALLSLLTAGLMKAGFFNSKYKNMMNEEQEAGEGAEGGEPAPE
NT seq 3411 nt   +upstreamnt  +downstreamnt
atggactggatcatttctaccacagtgtttttgtcagtgttaaaagctgcactgtgcttc
aatattgatcctgtggcttggaagaccgtgagtaactctgctgcaggttttggataccag
gtggtgcaaagacagtcagatttgctggtcagtgccccccttgaacaactttcaccaaat
gaaagagggcaaatatttaaatgttccaccaaagtctgcactccagtacgagtaccagtg
ccaagttttgcagtcaacatgtcccttggtttgacaatgacaagtgatcccaacacacaa
aaaactttggcatgtggtccaaccatcccaaaggactgcaaaagtatcacccagtatagc
ggtgtgtgctttgagatagactcttctgatcgcgttggatcccctgtgccttcttctatt
gaagagtgtcgaactatagcagacattgcatttctgttggatggctcaggcagcgtagaa
tattatgattttgagagaatgaagaattttgtgaaaagtgttgtcaagtcattcccagga
aaggatacaaagtttgccatcgcccagttctcctcgagagttgtcatccattattacttc
aatactttaaaaatggatgactgggaatctcaaatcaatagtataagacagttaactgga
gggactcacacaactacagccatcagagaagttgtcaacaacgtcttctcaacatataga
ggttccaggtcagatgttaagaagattttaatagtcattacagatggagaatctaatgat
gggggtgatttgcaaggtgcagcaaatttagctgaaaataaaaagattgttcgatttgct
gttggggtgggggatgcatttacaaagcccacagcaaaacaggaactgtacaccattgca
tcttcacgagacaaagtgtttcaagtgtcaaactttgaagctcttgatgtaatacggcag
aacttgcaggaccaaatcttctctatcgaaggatctcaaactggtggagagtcactgaaa
atggaaatggctcaaagtggattcagtgcagcttatgtgcctccgggttctacacagggg
attcagatggctattgttggtgccaaccagtggaggggaggcttcaaggaatacaataca
agcaagatgttcaactcttatcagcctttggacatagagcttgacagttatctgggttac
tccatggcagtcgccaacacgttgtctggtccactgacaattctcggtgctccaagatat
aaacacagaggaattgtgatgtcggtttttgcaagcagtatcggtgaaacaattgatccc
tttaattggcagttcaagattggtgaatattttggtgcagtggtttgcgccatggatgtg
aatcgtaacagctacactgacctagtcctcatatctgccccaatgtacatggacagtgat
agagagggaagagtttatgtttgcagcctatcacgtttgaaaattgagtgtcacttcgat
tctccattagtactgagaggggacgcatctgaacaaggaagatttgggtcttctcttgct
gtactcccagaccttaaccaagatggtttcaatgacttggcagttggagcacctttggag
aatgacggacaaggtagcatttacatcttccatggtgaaagaggaggaggaggaaggatt
agtcctgcttactcacagagaattgcttcctctgaggtaaagcaaggactgaagttcttc
gggatgtcgatcagtcagtcttcttttgaccgtagtaatgacaatctgcctgatttagcg
gtgggttcaaagggaacagttgtcttactcaggtcaaggcccatagtactggtggaagct
tcagtgacattcaacccgaaccaaatccaaacccaaaactcagactgctcaacaccactg
gataacacagctaaaatctgctttaccatgaccaaacactctgtcattgatacagctaga
gcaattattaattacactttcacactggatgcccaacgcaaggtcccaaataaccgagct
tacattagggacaaacaacgagagcagaccggatcattaactcttacctttgagcaaaaa
tgcaacgatgtgaaattcctcattcaggcctgtccagatgattctctgaatccagttaac
aatgagctccaattcatctttgacggtttgccttctagctcaggtctcagaccaagtcta
gcccagcaggctcagacaacaacttttcatcctttggtgtttgagatcaactgtggcact
gacaacgagtgtgtagataagctgaaagtggatttcaacttcactggatcctctgaggtt
aaagtaggcatggatgaactgctggatgtcaccgtctcagtggaaaacagtcatgaaaac
tcctacaacagccgtgtcattctcacttacccacccgggctttcctacaggaagtttaca
tcactgaagggaagaattgaatgcaactccttggacagtggagctggcttatctcaggga
aggacagactgcactattgacaagcctattttgaagagcaatgctaaggttctcttcatt
gtatcctatgggatcgacaccacttataaatttgacaggacgttaataatcactgcgaat
gccaccagtgggaatcagcacgccagtggaagcgaactttacaaaaagaatacgattgac
gtgaagtacagcatttatgctacaattgaaagttccctcacctacaccaatttcagtcat
ggaaagaatgatttgcagaaaccagtccatcaaccaattgtgcttgcaaatgacaacaga
gcactgaatttaactatggtgatcagggtgccagtaaagcttggtgataaagacatttgg
gtgaattccaacagcttgcagattccagactgccaaagagacacagatgaaaaacctaca
gtcacaaattttgttgctgagatacaaaaaaataagtctgtggactgctctgtagcctgg
tgcagagtgttcaagtgcaaccgattcatgggaagcctggagagtcaaacatacacaatc
tctgctaaccttagttcagaatggatagagcagattggacttaagtctgccagattcctc
ttgaccagtacggccactctggagtttgacagaaaccagtatattttctttttaccaggg
tcaaatcacaaccctctggttcacaagattgagacacaggtagaagtgtatcctgaacca
gacttcaccaaagagatcatcggaggatccctgggagggttggctctactcagtctactc
actgctggcctgatgaaggctggattttttaacagtaaatacaagaacatgatgaatgag
gaacaagaggctggggaaggggctgagggaggcgaacccgcaccagaataa

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