Scomber japonicus (chub mackerel): 128381966
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Entry
128381966 CDS
T09718
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128381966 (mms19)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128381966 (mms19)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128381966 (mms19)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
128381966 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
Adaptin_N
API5
Motif
Other DBs
NCBI-GeneID:
128381966
NCBI-ProteinID:
XP_053197982
LinkDB
All DBs
Position
20:complement(20287481..20302183)
Genome browser
AA seq
1030 aa
AA seq
DB search
MMADESALLLSLVEEFVSGLQDSKAKDAATALKDGQFTVLQLVEALGLSLTSSQPHTRAR
GVQLLSEVLHECYGDLTEREVEVLIAFYENRLKDHYVITPPVLQGLRALTKCNALPPGSA
VSMLRSLFQDVHVQSLMLTERACVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDP
RNLLLAFQIAKNIIYRGYDLGKFTEELFEVTSCYFPIDFTPPPNDPHGITRDELILMLRA
VLTGTPKFAEFLLPLIIEKLDSDVQSAKQDSLQTLAACVSQYEHKDLAEFLEGLWASLRR
EVFQTSSEKIESAGLAALTALTSCLSRSVLNSDSDDSLNTFLDLVLKDCKHHLCEPDLKL
VWPSAKLLQAACSASNRASHIITAAVMPSLIEQYNNRGECSHRRTLLEVVQRFILSVKSS
QSSESEESVLSAFRPSLCSMVFSALSESNANLQITATSALTSLSQQTGLLLDSDIELAVD
HLTGLLLKEDDNSVSAAVVECAGALAQLRPTAFITKLIPELKKQMFSEPMEQDRAESEQN
SHQAMRQRCLSALAAVSTQPSVVQESTPVLLEVLSSAHTGSVSFSVEEVVLACCSLQRIA
EQVKDTEETGLCFHDVIIPRLLSLALQAALQGEGSPGRRSPLVEEAALSAMVRVISTSCS
RLQPTLAGQTTSKAVSLFLDGDVSFLPDNSFPSNIQLLKKQQGDSWSQSQLVCLLMGCVC
SLPRSVEMPQIDRLLSELEEMSYTCSHPLSYTSAAKCFAGLVNKRPQGDSLDSLIQKTMK
RICSELDSTSSSVRIQAFTLMIWVAKALLLRYHPLFTALTDKLFSLLDDADLGPMAADSF
SLLMSDSADILNRGCHADIRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNK
LPKQVQVTELPALLSLLLEALSCPDQGVQLSTLSCLEPVLIDPPPALIQQLEALVSRLLA
LTSSPAMNVRMVSLRCIHALSRFPVHEILPFRARVLRALARPLDDKKRMVRSEAVQARGE
WFLIGSPGGR
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgatgaaagtgccttgctgctgtctctggtggaggaatttgtctcggggctg
caggacagcaaggccaaagatgcagcaacagctctcaaagatgggcagtttacagtactg
cagctggtggaagcactggggctgagtctgactagttctcagccccacactcgagccaga
ggagtccagctgctctcggaggttttgcacgaatgctatggagatcttacagagagagaa
gtggaagtgctcatcgctttctatgaaaaccgtcttaaggaccattacgtcatcacaccg
cctgtcttacaggggctccgagcgctgactaagtgtaatgccttgcctcctggctcggct
gtttccatgctgaggtctttgttccaggacgttcatgtgcagtcgctgatgctgacagag
agagcgtgcgtctacaacatgctcatcaacctcatggagaccagagaggccgagctgaag
ggcctgggtgcagactttgtgtttgggtttgtccagtcaatggacggggagagagatcct
cgcaacctcctgctagccttccaaatcgccaagaatatcatctacagaggttacgatcta
ggtaaattcacagaggagctgttcgaagtgacgtcctgctatttccccatcgactttacc
ccccctcccaacgacccccacggcatcaccagagacgaactcatcctgatgctgagagcc
gttctcaccgggacaccgaaattcgcagagttcctgctgccgctcatcattgagaagctg
gactcagacgtgcagagcgcaaagcaggactcgctgcagacactggctgcttgtgtgtca
caatatgaacataaagacttggcagagttcctggagggactgtgggcgtcgctgcgcaga
gaggtgtttcaaacatccagcgagaagattgagtctgcaggcctcgctgctctcaccgcg
ctcacttcctgtctgtctcgctcggttctcaactccgactctgacgactccctcaacacc
ttcctggatctcgtgctcaaagactgcaaacatcacctgtgtgagccagacctgaaactg
gtgtggcccagcgccaagctgctgcaggccgcctgcagcgcctccaacagggcgagccac
atcattacagccgctgtcatgccctcactcatcgagcagtacaacaacagaggagagtgt
tcacacagacggacgttactggaggtggtgcagagattcatcctctcagtaaaaagcagc
cagtcctcagagagcgaggagagcgtgctttcagctttccgtccgtctctgtgcagcatg
gtgttctcagctctgtcggagagtaacgccaatctgcagatcacagccacgtcggcgctc
acctcactatcacagcaaacaggtttgctgttggactctgacatagagctggctgtagat
cacctgactggactgctgctgaaagaggacgataacagcgtcagtgctgctgtggttgag
tgtgctggagccttagcacagctgcgcccaacagcattcatcactaaactgatcccagaa
ttaaagaagcagatgttttctgaacccatggagcaagacagagcagagtccgagcagaat
tcccatcaggcaatgcgtcagcgctgtttgtccgcgctagcagcggtgtccacccaaccc
agtgtggtccaagagagcacacctgtcctcctggaggtcctcagttcagcgcacacaggt
agcgttagtttctcggtggaggaggtggtgttggcgtgctgcagcctccagaggatagcg
gagcaggtcaaagacacagaggagacgggactatgcttccacgacgtcatcatcccgcgc
ctgctgtctctggcgctccaggcggcgctgcagggtgaggggtcacctggtcgtcgtagt
cctctggtggaggaggcggccctgtctgccatggtccgtgtcatcagtacttcctgctcc
aggctgcaacccacgttggcaggtcagacaacatcaaaggccgtgtctctctttctggat
ggtgacgtatcctttctgcccgacaactccttcccttcaaacatccagctgctcaagaag
cagcagggggactcatggagccagtctcagttggtttgtctcctgatgggttgcgtgtgt
tcgttgcctcgcagcgtggagatgccgcagatagaccggctgctgtcagaactggaggag
atgagctacacctgcagccacccgctgtcatacacctccgccgccaagtgttttgctggc
ctggtcaacaaaagaccacaaggtgattctctcgacagtctgattcagaagacaatgaag
agaatatgcagcgagttggattctacgtcttcatctgtgcgcatccaagccttcaccctc
atgatctgggttgccaaagctctgctcctaagataccacccactgttcacagcactgact
gacaagctcttctctctgcttgacgatgctgatctgggtcccatggcagcagacagcttc
tcgctgctgatgagcgactccgctgacatcttgaaccgtggttgccacgccgacatacgc
atcatgtaccgccagcgcttcttcagcgagaattcggctaagttggtccagggcttcaac
gcagctcctcaagaaaagaagcccaactacctgaaagctctgtccaacatagtcaataaa
ctgcccaagcaagttcaagtcactgaactaccagcgctcctgtcattgctgctggaggcg
ctgtcatgtcctgaccagggcgtccagctgtccaccctgtcctgtctggagcccgtcctc
atagacccgccaccagctctcatccagcagctggaggcgttagtcagcaggctgctggcc
ctcacctctagtccagccatgaacgtcaggatggtttcactgcggtgcatccacgccctc
tcccgctttcctgtacacgagatcttgccgtttcgggcacgggttttgcgagctttggcc
cgtcctctggacgacaagaagaggatggtgaggagcgaggcggttcaggcacgaggagag
tggttcctcataggaagtcctggtggaaggtga
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