Scomber japonicus (chub mackerel): 128381972
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Entry
128381972 CDS
T09718
Symbol
gdf2
Name
(RefSeq) growth/differentiation factor 2
KO
K05503
growth differentiation factor 2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
128381972 (gdf2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sjo04052
]
128381972 (gdf2)
Cytokines and neuropeptides [BR:
sjo04052
]
Cytokines
Transforming growth factors (RSTK binding)
128381972 (gdf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
CBM96
DUF5104
Motif
Other DBs
NCBI-GeneID:
128381972
NCBI-ProteinID:
XP_053197987
LinkDB
All DBs
Position
20:complement(20390087..20393037)
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AA seq
442 aa
AA seq
DB search
MGADIRTVVLALGISIFKPCHRKVCFQAGKKLCLSLMVSTGSCTCKPLNNDIQRGDPEGF
YSHLSEEALLEEEDMDSNMENLLGTMKEDFLRKLNLSDVPQEHSKIYPPQFMMELYDKYA
SDSMAIPQSDVIRSFTVQDITHSMTNGTKSKHRLLFNISIPSHEKITTAELQLFFLPDAR
SSVTSHSFKTTVKVYEVDYNDFKSTTQLLVGREVTGLQSTWVTLDVTTAIQSWIMSGHGM
TGFDVAVDGKDCGLSGEGAAGCYNMSMSVGDNTSAALIVFSDDLGSRKRETKKELQEMIL
HEEEAILHSGADWNRGDELQNQILEAQHPRRRKRKAEREYCRRTSLRVNFKDIGWDSWIV
APPEYDAFQCRGLCYHPLTDETTPSKHALIQTLINIRNPKKANMACCVPIKLDPITVMYQ
ENGRLTIRYLYEEMKVAECGCR
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggacatcaggacagtggtccttgcattggggatctccattttcaaaccttgt
catcgcaaagtctgttttcaagccgggaagaagttgtgtttgagtctgatggtttctact
ggctcctgcacctgtaagcctctcaataatgacattcaaagaggggaccctgagggattt
tactctcatttgtcagaggaggctcttctggaggaggaagacatggactcgaacatggag
aacctcctgggaaccatgaaggaggactttctgaggaaactcaacctgtcagacgttcct
caagagcacagcaagatctaccctcctcaattcatgatggagctctacgacaagtatgcg
tctgacagcatggcaatccctcagtctgatgtcatacgaagcttcactgttcaagatata
actcactcaatgacaaatggcacaaagtcaaagcacaggctgctgttcaacatcagcatc
cccagccatgaaaagatcaccactgctgaactacagcttttcttcctcccggatgccagg
tcaagtgtcacctcccacagtttcaagaccaccgtcaaagtctacgaagtggattacaac
gatttcaaatctacaacccaactactggttggccgagaggtgacagggttgcagagcacg
tgggtgacattggatgtgactacagctattcagagctggatcatgtcaggccatggaatg
actggatttgatgtagcagtggatggaaaggactgtgggctttctggagaaggagcagct
ggctgttataatatgagtatgtctgttggagataacacttcagcagctttaatagtcttc
tcagatgacctgggtagcaggaagagggagacaaagaaggaactacaagagatgatcctg
catgaagaagaagccatcttacactcaggtgctgactggaacagaggggatgaacttcaa
aaccagattctggaggcccagcacccacggaggaggaaaagaaaggctgagagggagtac
tgcagacggacctcgctcagagtaaactttaaggatatcggctgggacagctggatcgtg
gcacctccagaatatgatgcatttcaatgtcgaggattgtgttaccacccactgacggat
gaaacaaccccgtccaagcatgccctcatccagacgctgatcaacatcaggaaccccaag
aaggccaacatggcatgttgtgtccccatcaaactggaccccatcactgtcatgtatcag
gagaatggacgcctcactatcagatacctgtatgaggagatgaaggtggcagagtgtggg
tgcaggtag
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