Scomber japonicus (chub mackerel): 128382053
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Entry
128382053 CDS
T09718
Name
(RefSeq) cadherin-7-like isoform X1
KO
K06799
cadherin 7, type 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128382053
Cell adhesion molecules [BR:
sjo04515
]
Cadherins
Major cadherins
128382053
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
128382053
NCBI-ProteinID:
XP_053198006
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Position
21:complement(6483186..6589616)
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AA seq
800 aa
AA seq
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MMGWCCSGICRALALLALLLPLRERGCWGLNPSSGDLEKSPHSDPAPWEVLHRHKRSWVW
NQFFVLEEYTGIEPLYVGKLHSDVDKGDGKVKYVLSGEGATSIFTIDENTGDIHATKRLD
REAQAYYTLQAQAVDRLTNLPVEPRSEFVVKVQDINDNEPKFLDGPYLADVPEMSPLGTM
VVQVAATDADDPTYGNSARVVYSIIHGQPYFSVEPKTGVIRTALPNMDRETRDQYVLVIQ
AKDMVGQMGGLSGTTSVTVTLTDVNDNPPRFPHKNYQYTVLESLPVQSVVARIKATDVDI
GSSAEMDYRIMDGDGPGMFNITTDEDTQEGVIILLRPLDYETKSSFSLRIEATNRNIDSN
FLSLGPFSDTTSVKVTVEDVNEPPVFSTPLIKMVVSEDAKVGTSIGRVSAHDPDNTNSGI
RYSIDRNTDLERFFNVDALSGVISTAKPLDREANSVHNLTIFGIESQDPAQIGKGITLIT
VLDINDNAPVFAIDYETLLCENAMPGQVIQTISAVDKDEPLSGHRFYFSLAAPVAGNLNF
TLRDNKDNTASILTKRGGFRRREQPVYRLPVLIVDSGSPALSSTNTLSVRVCDCDSDGVA
LSCGAVAYTSTGLSTGALLAILGCIITLLVMVLLIVTMRRRRKEPLILEEERDIRENIVR
YDDEGGGEEDTEAFDMVTLRNLNVIRDPNVRRDVTPDTPTFFHYPSATRPSYKSLPDNVV
FREFIWERLKDADVDPSAPPYDSLQTYAFEGSGSIAESLSSLESLSTDSDQNYDYLSNWG
PRFKKLADLYGNSDGTSVFS
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgatggggtggtgttgctcaggcatatgcagagccctggctctcctggcactcctgctt
cccttgcgggagaggggctgctgggggctaaatcccagctctggggatctggagaagtcc
ccacactctgatccagccccctgggaggtcctgcacaggcacaaacgcagctgggtatgg
aaccagttcttcgtgttagaggagtacacgggaattgagcccctctatgttggcaagcta
cattcagatgtggacaaaggagatggcaaggtgaagtatgtattatcgggggaaggcgcc
acctccattttcaccattgatgagaacacgggagacatccacgccacaaagcgtctcgat
cgggaagcacaggcctactacacgcttcaagctcaagccgtagaccgactcaccaattta
cccgtggagcccaggtctgagtttgtggtcaaggttcaagacatcaatgataatgagccc
aagtttcttgatggaccatacttggcagatgtgccagagatgtcacccttaggaaccatg
gtggtgcaagtggcagccacagatgcagatgacccaacatatgggaacagcgccagagta
gtctacagcatcatccacggacagccttacttctcagtggagcccaaaactggtgtcatc
aggacagctctacctaacatggacagggagacgagggaccagtatgtgctcgtcatccag
gccaaagacatggtcggccagatgggcggtctctccggcaccacctccgtcactgtcaca
ctcaccgatgtcaacgacaacccacctcggttccctcacaaaaactatcagtacacagtc
ctggagtcgctgcctgtgcaatcagtggtggccagaatcaaagcgactgatgttgatata
ggctccagcgcggagatggactacaggatcatggatggcgatgggcctggcatgttcaac
atcacaacagatgaggacacacaagagggggtcatcattcttctgaggcctctagactat
gaaacaaagagcagcttttctctgagaatcgaagccacaaacaggaatattgactccaac
ttcttgagcttgggcccatttagcgacacgacatcagtcaaggtgacagtggaagatgtg
aacgagccacccgtcttttccacgccacttatcaagatggttgtttcggaggacgccaaa
gtgggcacctcaatcgggagagtgtccgcacatgacccagataacaccaacagcggcatc
aggtattccattgacagaaacacagacttggagcgcttttttaacgtggatgctctaagt
ggggtcatcagcacagccaagcctctggaccgggaggccaactcagtccataacctcacc
atctttggcatcgagagccaggatccagcccaaattggaaaaggcatcactctcatcacg
gtgctggacataaatgataatgccccagtctttgccatagactatgagactctcctctgt
gaaaatgccatgccaggacaggtgatccagaccatcagcgccgtggacaaggacgaacct
ctgagcggtcatcgcttctatttttccctggctgcacctgttgccggcaatctcaacttc
actctacgagataacaaggacaacacagcgtccatactgacaaaaagggggggcttccgg
agacgggaacagcccgtgtatcggctgcctgtgttgatcgtggacagtggaagtcctgcc
cttagcagcacaaacacactctcagtgcgtgtgtgtgactgtgactctgacggtgtggcc
ttgtcgtgtggagctgtggcatacacttcgactggcctgagcactggtgccctcctcgct
attttaggctgcatcatcacacttctggtgatggtactgttaattgtgacgatgcgtcgg
aggaggaaggagcctctgattctcgaggaggagagagacatcagagaaaacattgtccgt
tacgacgacgagggcggaggagaggaagacacggaggctttcgatatggttaccctacgc
aatttgaacgtcatcagagatcccaacgtgaggcgagatgtcacaccggatacgcctacc
ttctttcattacccgtcagctactcgcccttcctataaatccctgccggacaatgtggtg
tttcgagagtttatttgggagcgacttaaggatgctgatgtggatccgtcagctccaccc
tatgactctctgcagacatatgcttttgaaggcagtggctccatagcagagtcgctaagc
tcactggaatcactaagtacagactcagatcagaactatgactatctcagcaactgggga
ccacgcttcaaaaagctagctgacctctacggcaacagcgacggcaccagtgtcttctca
tag
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