Scomber japonicus (chub mackerel): 128382095
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Entry
128382095 CDS
T09718
Symbol
si:ch211-230g15.5
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11458
polyhomeotic-like protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128382095 (si:ch211-230g15.5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sjo03036
]
128382095 (si:ch211-230g15.5)
Chromosome and associated proteins [BR:
sjo03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
128382095 (si:ch211-230g15.5)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
zf-FCS_1
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
128382095
NCBI-ProteinID:
XP_053198052
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Position
21:2800355..2840013
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AA seq
1148 aa
AA seq
DB search
MDRELVRQSQPEHGESTNGTSPQTPSAGPDSSSSAPVTPTPPRLTPNPMLLDSPAPTLTP
TTSSPPPPLTPAPSITATHGPKVAATVAGSPSPHILVPTPPKLTSTGTPPLRTYSRHILP
SSKTSSISQTSSSSSSSSSPTVATTTSPIFSSSSSTHSNTLSTKTSTTLTNGNTRPVSTP
TSTPITPFHTPASPPGRQVSQTHPVGTPGLVRANQSPAPVRQRVSQQTLLLGKGLKGSGQ
DQVLLRAQMLQSLTLRPPPPGAFTIPPSLRLKPPSSAPPPLSHPRNPLFPPLRPRPQSST
TATESLTTPSRHLSVPPPTLYSPVRAVPLRPRLHSPRAVSPRQSSTHQPIAAAPAAQASP
ISRPSAGPKSVLGPGQSQHGSLPVTSPVPAASHFEPPPSAARQLQIIALSSGRQLQPGTY
SHAPVQPVAASSELSGQSKRTLSSDDVLPLPLNPSLPKTTSPLPSPPSLLSPASPPSQAG
PQTQTLVQKGGGGEAKESEEQREKGRGVRQGVGDEGSVGQDLRKERDDQREKGKEERPRL
AAEKDGSLASPKEKEAEAGREEEKMEVTEEGQSERERGEEKCERESKEEEKKMEEEEEEE
GETAMDQSENTSSPLLNQHNVDLNQKDFNKEPKPILGLISAPVPVPVQNPAPVPVPVSVP
APVPAPVQVPVQVQVPVQVPVPLLEPSVQSQRLPELPRDLQPANQEDFCENMSTQSDNQS
ALSSLSSQSPPSSPFIVPSADNPPPLLLPPAQPDRPADLSLPQPPPQNPEKTTTDGESEQ
QQQETQSAEAEVQTEVQTEAELIGKSEEESESFSQPLSVPWEPKAWPEGRQVLTHLVEGF
VIQEGLQPFPVRTHSQTRGCTLKNVNRSSLLVPEQVTKPQEVNGTNGKAALPATPSEITK
QAEPSTDSEEEGGDTDDPERGSGHRDRAVLHCQFCGKRGHAHNFMRSKRFCSTSCARGFN
VRLTKRLRALSAGSRSERPRPALNRAESVPGKPLLLRLPRDLWSAGRREKKGKEKVTAAE
EEDEEEDMEGGGEEEDDDGGEEDPAVAMTARMDRRAARRARRASAPAVTTSTPTTTFKPA
PSQWSVEEVTAFIHTLPGCSDVAEAFRLQEIDGQALLLLTEDHLMTSMNIKLGPALKICA
HINALKNQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggacagggagctggttcgacagagccagccagaacacggagagtccaccaatggcacc
agccctcagactccctccgccggcccggactcctcctcctccgccccggtgaccccgacc
cctcctcggctcacccccaacccgatgctcctggactccccggcgcccacgctaacgccc
accacctcctcccctccccctcctctcaccccggcgccctccatcacagcgacacacggc
cccaaggtggcggccacggtcgccggctctccctccccccacatactggtccccactccc
cctaaactcacctctactgggactcctcccctccgcacgtactctcgccatatccttccc
tcctccaaaacgtcatctatatcacagacctcctcctcctcctcctcctcttcctcccct
actgtagccaccaccacttcgcccatcttctcttcttcgtcttcaacgcacagcaacacc
ttgtcaaccaagacttccaccaccttaaccaatgggaacacaaggcccgtttccacgccg
acctccacaccaatcacgccctttcatactccagccagtccgcctggcagacaggtatca
cagactcatcctgtgggcacacctggtctagtgcgagccaatcagagccccgcccccgtc
aggcagcgggtatcccagcagacattgctcctagggaaaggtctcaaagggtcgggccaa
gaccaggtgctgcttcgagctcagatgctccagagtctcaccttgaggcctcctcccccc
ggagctttcaccatccccccttccctccgtctcaagcccccctcctcagccccgcctccc
ctgtctcaccctcgcaatcccctcttcccacctctcaggccacgaccgcagtccagcacc
acggcaacggagagcctgacaacgccgagtcgccacctctctgtcccgcctccaactctc
tactctccagtccgagccgtccctctgagacccagacttcactctccgcgagctgtgtct
ccaaggcaatcctcgacccaccagccaatcgcagccgctcccgccgctcaggcttctcct
atcagccggccgtcagcgggaccgaagagcgtgctcgggcccggccaatcgcagcacggc
tcgctacccgtcaccagccccgtgccggctgcttctcatttcgagccgccgccgtccgca
gcgaggcagctgcagatcatcgctctctcctcgggccgccagctgcagcctggaacctac
agccacgcgccggtgcagccggtcgcagcctcgtccgagctctccggccaatcgaagcga
actttgagcagcgacgacgtgcttcctcttccgttaaatccatcgttgccaaaaacgacg
tctcctctgccctcgccgccttctctcttgagcccggcttcaccgccgagtcaggccgga
cctcaaactcaaactctggtccagaaaggaggaggaggagaggcgaaggagagcgaggag
cagcgagagaaggggagaggggtgagacaaggagtcggggatgaagggagcgtcggacaa
gacctgcggaaggagagagacgaccaaagagagaaaggaaaggaggagaggccgaggctg
gcggccgagaaggacggaagcctcgctagtccaaaagagaaagaagccgaagctggaaga
gaagaagaaaagatggaggtgacggaggaaggacagagtgaaagagagagaggagaggag
aagtgtgaaagggagagtaaagaggaggagaagaagatggaggaagaggaggaggaggaa
ggagagacagccatggatcagtccgagaacacgagcagtccgcttctcaaccagcacaac
gtagacctgaaccagaaagacttcaacaaagaaccaaaacccatcctgggtctcatttca
gctccggttccagttcctgtccaaaacccagctcctgtcccggtgccggtctcagtaccc
gctccggttccggccccagtccaggtcccggtccaagtccaggtcccggtccaggtcccg
gtcccattactggagccatctgtccagagtcagcggctgccggagcttcctcgagacctg
cagccggccaatcaggaggacttctgtgagaacatgtcgacccagtccgacaaccagtca
gccctgtccagcctctcctctcagtctccgccctcctcgcctttcatcgtcccctcagca
gacaacccgccccccctcctcctccccccggctcagcccgaccgtccggccgacctcagc
ctgccgcagcccccaccccaaaaccccgagaagacgacgacggacggcgagtcagagcag
cagcagcaggagacgcagtcggctgaagcggaggtgcagacggaggtgcagacggaggcg
gagcttatcggcaaatcggaagaggagtcggagagcttcagccaaccgctgagcgtcccc
tgggagccgaaggcgtggccggaggggcgacaggtcctgactcacctggtggagggcttc
gtcatccaggaggggctccaaccgtttcctgtacgcacacactcacaaacacgaggctgc
actctgaaaaatgtgaaccgctcgtccctgctggttccagaacaggtgaccaaaccgcag
gaagtgaacgggaccaatgggaaagcagcgctgccggcaacaccaagcgaaatcaccaaa
caagccgaaccttcgacggactcagaggaggaaggaggagacacagacgacccagagaga
gggtcgggccacagggaccgagcggtgctgcactgtcagttctgtgggaaacgaggccac
gcacacaacttcatgcggtccaaacgcttctgctccacttcctgtgcacgagggtttaac
gttcgtctgacgaagcgtctgcgagccctgagcgcaggcagccggtccgagcggccccgc
ccggcgctgaacagggcggagtcggtccctgggaagcctctgttactgcggctgcctcgt
gatctctggagcgccggtcgccgcgagaagaaaggaaaagagaaggtaacggcagcagag
gaagaggatgaggaggaggacatggagggaggtggggaggaggaagatgacgacggagga
gaggaagatcccgcggtcgccatgacggccaggatggaccgtcgggcggcacggagagcg
aggagagcgtccgcgcccgccgtcaccacctctacgcccacaaccacgttcaaacccgcc
ccctcgcagtggagcgtggaggaagttaccgccttcatacacacactgccaggctgcagc
gacgtggccgaggccttcaggctgcaggagatcgacggccaggctctgctgctgctgacc
gaggaccatctgatgaccagcatgaacatcaaactggggccggctctcaagatctgcgct
cacatcaacgcgctgaaaaaccaatga
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