Scomber japonicus (chub mackerel): 128382100
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Entry
128382100 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128382100
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128382100
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
128382100
NCBI-ProteinID:
XP_053198060
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All DBs
Position
21:complement(1032729..1042785)
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AA seq
1017 aa
AA seq
DB search
KLKSNLQEKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEVRQIETATRKQD
RPETTIRQEDIFKAPPGRDKPIRRVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIDFTFP
FTFRELNVQKEKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEI
LTDVTESTSVDVLLTNLFRGKLLPSARLWITTRPAAANQIPPWCVDMVTEVRGFTDPQKE
EYFRKRFRDEEQARTIISHIKTSRSLHIMCHIPVFCWITATVLECSMKSRERGELPKTLT
QMYLRLMLLQSEVKNIKYDGGAKKDLRWSPESRKMIESLGKLAFEQLQKGNLIFYESDLT
ECGIDIREASVCSGVFTEIFKKEDCGLLQVFCFVHLSVQEFLAALHVHLTFIKSGVNLLA
GNTIISRFTEMFRSKSARFYYSAVDEALKSPNGHLDLFLRFLLGLSLQTNQPLLRGLLTQ
IGSSSQANQETVKYIKKRLSENVSAERSINLFHCLNELNDRSLVEEIQQYLRSGSLSTDK
LSPAQWSALGFILLSSEKDLDVFDLKKYSASEKVLLRLLPVVKASKKALLTDCNLSERSC
AALSSVLSFQSSSLRDLDLSNNNLQDSGVEQLSAGLESPHCGLETLRLNGCKLSERSCEA
LSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCELKTLRLTDCKLSERSCAALS
SVLSFQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCGLKTLSLSGCLITEEGCASLASA
LRANPSHLRELDLSYNHPGDSGEKLLSAGLKDPHWRLDTLSLQPAGVRWLTPGLRKYFCE
LELDPNTMHRRLILSDNNRKVTRVKKYQSYPDHPDRFDVWQLLCRNDLTGRCYWEVEWRG
DVHISVSYRRISRKGASDDCLFGMNDQSWSLWCSDDGYFVWHNKRITYISSSSSSSSSSS
SVSNRVAVYVDCPAGTLSFYRVSSDTLIHLHTFNTTFTEPLCAGFWLGSGSVSLCGL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
aaactcaagtctaacctgcaggagaagttccagtgtctgtttgaggggattgctaaagca
ggaaacccaacccttctgaatcagatctacacaccgctctacatcacagagggagggact
gcagaggtcaatgatgaacatgaggtcagacagattgaaacagcaaccaggaaacaagac
agaccagaaacaacaatcagacaagaagacatctttaaagccccacctggaagagataaa
ccaatcagaagagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacag
aagttcactctggactgggctgaagacaaagccaaccaggacatagacttcacatttcca
ttcactttcagagagctgaatgtgcagaaagagaagtacagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtg
ttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatc
ctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcttcaggggg
aaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatc
cctccttggtgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggag
gagtacttcaggaagagattcagagatgaggagcaggccagaaccatcatctcccacatc
aagacatcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgct
acagttctggagtgcagcatgaaaagcagagagagaggagagctgcccaagaccctgact
cagatgtacctccgcctcatgttgcttcaatccgaagtcaaaaacatcaagtatgatgga
ggagctaaaaaagatttacgctggagtccagagagcaggaagatgattgagtctctggga
aaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcagagaagcctcagtgtgctcaggagtgttcacagagatcttt
aaaaaggaggactgtgggctattgcaggtgttctgcttcgtccatctgagtgttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggca
ggaaacacaataatatccaggttcactgaaatgtttagaagcaaatcagcacgtttctac
tacagtgctgtggacgaggccttaaagagtccaaatggacacctggacttgtttctccgc
ttcctcctgggtctttcactgcagaccaatcagcctctcctacgaggtctgctgacacaa
ataggaagtagctcacaggccaatcaggaaacagtcaagtacatcaagaagaggctcagt
gagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctgggcttcatcttactgtcatcagaaaaagatctg
gacgtgtttgacctgaagaaatactctgcttcagagaaggttcttctgaggctgctgcca
gtggtcaaagcctccaaaaaagctctgctgactgactgtaacctctcagagagaagctgt
gcagctctgtcctcagttctcagcttccagtcctctagtctgagagatctggacctgagt
aacaacaacctgcaggattcaggagtggagcagctttctgctggactggagagtccacac
tgtggactggaaactctcaggctgaatggctgtaagctctcagagagaagctgtgaagct
ctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaac
aacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtgaa
ctgaagactctcaggttgactgactgtaagctctcagagagaagctgtgcagctctgtcc
tcagttctcagcttccagtcttctagtctgagagatctggacctgagtaacaacaacctg
caggattcaggagtgaagcagctttctgctggactggagagtccacactgtggactgaag
actctcagcctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcctcagct
ctgcgtgccaacccctcccatctgagagagctggacctgagctacaatcatccaggagac
tcaggagagaagctgctgtctgctggactgaaggatccacactggagactggacactctc
agcctgcagcctgctggagtccgatggttgacaccaggtctgaggaagtatttctgtgaa
ctggaactggatccaaacacaatgcacagaagactcatactgtctgataacaacaggaag
gtgacacgtgtgaagaagtatcagtcatatcctgatcatccagacagatttgatgtctgg
cagctgctgtgtagaaatgatctgactggtcgctgttactgggaggtcgagtggagagga
gacgttcatatatcagtgagttacagaagaatcagcaggaaaggagccagtgatgactgt
ttgtttggaatgaacgatcagtcctggagtctgtggtgctctgatgatggttactttgtc
tggcacaataagagaataacatacatctcctcctcctcctcctcctcctcctcctcctcc
tctgtctctaacagagtagcagtgtatgtggactgtcctgctggcactctgtccttctac
agagtctcctctgacacactgatccacctccacaccttcaacaccacattcactgaacct
ctgtgtgctgggttctggttgggttctggttcagtgtctttgtgtggtttgtag
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