Scomber japonicus (chub mackerel): 128382143
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Entry
128382143 CDS
T09718
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X1
KO
K13249
translocon-associated protein subunit alpha
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128382143 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128382143 (ssr1)
Membrane trafficking [BR:
sjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
128382143 (ssr1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
128382143
NCBI-ProteinID:
XP_053198112
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Position
21:complement(2436532..2449187)
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AA seq
298 aa
AA seq
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MMKFLPKLLLLLLLAFPATFLIKGPAVSAQDLTEDEEAEAVDEDVVDDVTAEDEDDEAEV
EDDENTELTEEKEDEEEEALVGEVKASPNADTTILFVKGDDFPANNIVKFLLGFTNKGAE
NFVVESLDASFRYPQDYQFFIQNFTALQLGIVVPPSKQATFEYSFIPAEPMGGRPFGLVI
NLNYKDGNGNVFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLVVVGLHQLLESRK
RRRPAPKVEMGTSSHNDVDLSWIPQETLNQIMQSRRDKASPRRSPRKRSQKRSAGSDE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaattcttacctaaactactgctgctattgctgctagccttcccggcgactttc
ctcatcaaagggccggcggtgagcgctcaggatctgactgaggatgaggaggccgaagcc
gtggatgaagacgtggtggacgacgtgacggccgaggatgaggacgatgaagccgaggtg
gaagacgacgaaaacacggaactgacggaagaaaaagaagatgaagaagaagaagcgttg
gtaggagaggtgaaggcttctcccaacgctgacaccaccatcctgttcgttaaaggagac
gacttcccggccaacaacattgtgaagttcctgctcggcttcaccaacaaaggagcggag
aacttcgtggtggaatctctggacgcttctttccgttaccctcaggattatcagttcttc
atccagaacttcacggctctgcagctcggcatcgttgttcctccgagcaaacaggccacc
ttcgagtactccttcatccccgctgagccgatgggaggccgacccttcggactcgtcatc
aacctcaactacaaggacggaaacggaaacgttttccaggatgcagttttcaaccagacg
gtgacgatcacagagcgagaggacggactggacggagaaacgatcttcatgtacgtcttc
ctctcaggtctgggtctgctggtcgtcgttggtcttcaccagctgctggagtccagaaag
aggaggcgtccggctcctaaagtagaaatgggaacttcgagccacaacgatgtcgacctg
agctggatccctcaggagacgctgaaccagatcatgcagagtcgtagagacaaagcatct
cccagaagatctcctcgcaaaaggagccagaaacgttcggccggctccgacgagtga
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