KEGG   Scomber japonicus (chub mackerel): 128382157
Entry
128382157         CDS       T09718                                 
Symbol
chmp5b
Name
(RefSeq) charged multivesicular body protein 5
  KO
K12198  charged multivesicular body protein 5
Organism
sjo  Scomber japonicus (chub mackerel)
Pathway
sjo04144  Endocytosis
sjo04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    128382157 (chmp5b)
  09143 Cell growth and death
   04217 Necroptosis
    128382157 (chmp5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128382157 (chmp5b)
Membrane trafficking [BR:sjo04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    128382157 (chmp5b)
SSDB
Motif
Pfam: Snf7 NPV_P10 Histone_HNS_N DUF948 SpoIISA_toxin DUF4041 FliJ
Other DBs
NCBI-GeneID: 128382157
NCBI-ProteinID: XP_053198129
LinkDB
Position
21:4570963..4578038
AA seq 219 aa
MNRIFGRGKPKGPPPNLSDCIGSVDSRAESVDKKIARLDVELAKYKDQMKKMRDGPSKNM
VKQKAMRVLKQKRMYESQRDNLMQQSFNMEQQNYTIQTLKDTKTTVDAMKVGLKDMKKAY
KHVKIDQIEDIQDQLEDMMEDANEIQEAMGRSYGTPDIDEDDLEAELDALGDELLLDEDS
SYLDEASSAPSIPQGLPGESSNRDGVLVDEFGLPQIPAT
NT seq 660 nt   +upstreamnt  +downstreamnt
atgaatcgtatatttggcagagggaaacctaagggtccaccacccaacttgtcggactgt
ataggaagtgttgattctcgagcagagtccgtcgacaagaagatcgctcgtctagatgtt
gaactggcgaagtacaaagatcagatgaagaagatgagagacggaccttcgaagaacatg
gtgaagcagaaggcgatgagagttttgaagcagaagagaatgtacgagagtcagagagat
aacctcatgcagcagtcgttcaacatggaacaacagaactacacaatccaaacgctcaaa
gacactaaaactacagttgacgccatgaaagtcggcctcaaagacatgaagaaagcctac
aagcacgtgaagattgatcagattgaggatattcaagatcagctcgaggacatgatggaa
gacgccaacgagatccaggaggcgatggggcggagctacgggacgcccgacatcgacgag
gacgacttggaagcagagttggacgctctgggagacgagctcctgctggatgaggacagc
tcctacctggatgaagcctcctccgctccctcgatccctcagggtctgcctggagagtcc
agcaacagggacggtgttctggtggacgagttcggccttcctcagattcccgccacataa

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