Scomber japonicus (chub mackerel): 128382173
Help
Entry
128382173 CDS
T09718
Symbol
pld1b
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipase D1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo00564
Glycerophospholipid metabolism
sjo00565
Ether lipid metabolism
sjo01100
Metabolic pathways
sjo04144
Endocytosis
sjo04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
128382173 (pld1b)
00565 Ether lipid metabolism
128382173 (pld1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128382173 (pld1b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
128382173 (pld1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128382173 (pld1b)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
128382173 (pld1b)
Membrane trafficking [BR:
sjo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
128382173 (pld1b)
Endosome - Golgi transport
Others
Others
128382173 (pld1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
DUF3785
DUF2961
Motif
Other DBs
NCBI-GeneID:
128382173
NCBI-ProteinID:
XP_053198145
LinkDB
All DBs
Position
21:complement(2976246..3023577)
Genome browser
AA seq
1035 aa
AA seq
DB search
MLHQSDPTSSTLQLVANDMTGIMETLDTRELDLEDGEYNTTDSGVPAQRLSFMAIYNTVG
FKEPEAKVFLSAPITAKILEVERFTSAQDRFNVTTQRSVNKSLPAVFKIELKHGEFTWLV
KRKEKHFMDLHRELRTYKTFMRLPLPTRSHTVKRQTATRTEARQMPNLPRGGGDELGREE
QVSSRRKQLEDYLNNLLKMPMYRNYHATMEFIDVSQLSFIHDLGPKGLEGMVLKRSGGHR
IPGINCCGRSKMCYRWSKRWLVVKDSFLLYMKPDSGAISFVMPFDKEFCIKMDSKETETK
HGVRIDSLSRSLVLKCTSYRHARWWGQAIEGFVQKHGSAFLTDHRFGSFAREEENIPAKW
YVNGKTYMEDVANALEEAREEIFITDWWLSPEIFLKRPVVEGNRWRLDCILKRKAQQGVR
IFVMLYKEVELALGINSGYSKRTLLHLHPNIKVMRHPDHVSSAVYLWAHHEKIIVIDQSV
AFVGGIDLAYGRWDDKEHRLTDVGSVTLSQAETSPANMTAPANGSGAVSQGNGKKIFTVT
DSVDQPKLKGQGRMKRTRFSIKKHLQKHGLAHPDSDSDAEPEERSGSVRSLHTGVGELFG
NTRFWHGKDYCNFVHKDWIQLDKPFDDFIDRHTTPRMPWHDISSVVHGKAARDVARHFIQ
RWNFTKLVKPKYRSLSYPYLLPKSHTTAGEQRYQVPDCTPAKVQILRSASDWSAGIKYHE
ESIHNAYVETIKNSQYFIYIENQFFISCADNRHVFNKIGDTIAERIIKAYREGKKYRVYV
VTPLLPGFEGDINTGGGSAIQAVMHFNYRTMNRGDQSIISQLRREMGDQWMNYISIAGLR
THADLEGKLVTELIYVHSKMLIADDNTVIIGSANINDRSMLGKRDSEVAVIVEDSETVTS
VMDGQEYQAGKYALKLRLECFKMILGANTDPSIDVSDPISDQFYKEVWMATCAINATIYQ
RVFRSLPSSDVRNILELEGYLAKLGLDKEDPARAHEELKKIRGFLVQFPLQFLSEQNLLP
PIGSKEAMVPMEVWT
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgctgcatcagtctgacccaacgtccagcacccttcagctggttgccaacgatatgacc
ggcatcatggagacgctagacacccgagagctcgacctggaagatggcgagtacaacacg
acagactctggcgtcccagcacagcgtttgtctttcatggccatctacaacacggtgggt
ttcaaggagcccgaggccaaagtcttcctttctgcaccgatcaccgccaagatcctggag
gtggagcggttcacctcggctcaggatcgcttcaacgtcaccacgcagaggagcgtcaac
aagtcgttgccggcggtgtttaagatcgagttgaaacacggagagtttacgtggctggtg
aagaggaaggagaaacacttcatggatctccaccgagagctgagaacgtacaagacgttc
atgaggctgccgctgccgacacgcagccacacggtgaagcggcagacagcaacgaggacc
gaggcgaggcagatgccgaaccttcccagaggaggaggagacgagctgggcagagaggag
caagtttccagccgcaggaaacaactggaagattacttgaataatctgttaaagatgccg
atgtacaggaactaccacgcaacaatggagttcattgatgtcagtcagttatccttcatc
catgacctgggaccaaaaggcttggaagggatggtgctgaagcgctccggcggccatcgg
atccccgggataaactgctgcggtcgcagtaagatgtgctaccgctggtccaaacgctgg
ctcgtggtgaaggactcgttcctgctgtacatgaagccggactcgggcgctatctccttt
gtgatgccgttcgacaaagagttctgcatcaagatggactccaaagagactgagaccaaa
cacggcgtccgcatcgacagtctctccaggtcgttagtgctgaagtgcaccagctacaga
cacgcccgctggtggggtcaggccatcgagggcttcgtacagaagcacggctcggcgttc
ctcaccgaccaccgcttcggatccttcgccagagaggaggagaacatccctgccaagtgg
tatgtgaatggtaaaacatacatggaggatgttgccaatgctcttgaagaagccagagag
gagatattcatcacagactggtggttgagtccagagatcttcctgaagaggcccgtcgtc
gagggcaaccgctggcgtctggactgcatcctgaaacgcaaagcgcaacaaggagtgcgt
atctttgtgatgctgtataaggaggtggagttagctctgggcatcaactcaggatacagc
aagaggacgctgctccaccttcaccccaacatcaaggtgatgcgtcacccggaccacgtc
tcctccgccgtctacctgtgggcgcatcacgagaagatcatcgtcatcgaccaatcggtg
gccttcgtgggcgggatcgacctggcgtacggtcgctgggacgacaaagagcaccggctg
acggatgttgggagtgtgacgctctcacaggctgaaacttcccctgccaacatgaccgcc
ccggctaatggcagcggtgccgtctcccagggcaacgggaagaagattttcacggtgacg
gactcggtagaccagccgaagctgaaaggtcagggcaggatgaagaggacgaggttcagc
atcaagaaacacctgcagaaacacggcctggcgcaccccgacagcgacagcgacgccgag
cccgaagagaggagtggttcagtgaggagtctgcacaccggcgtcggagagctgtttgga
aacacgcggttctggcacgggaaggactactgcaacttcgtccacaaagactggatccaa
ctggacaaacccttcgatgactttatagacaggcacacgactcctcggatgccttggcac
gacatttcttcggtggttcacggaaaggccgctcgggacgtggcgagacacttcatccag
cggtggaacttcacaaagctcgtgaagccaaagtatcgctctctgtcgtacccgtatctt
ctgcccaagtctcacaccacggccggagagcagcgataccaagtccccgactgcaccccc
gccaaagtccagatccttcgttcagcttctgattggtctgctggcatcaaataccacgag
gagtccatccacaacgcctacgtggaaaccatcaaaaacagccagtacttcatctacata
gagaatcagttcttcatcagctgtgcagacaacaggcacgtattcaacaagataggagac
actattgccgagcgcatcatcaaagcatatagggagggtaaaaagtaccgtgtgtacgtg
gtgacgcctctgttgcctggcttcgagggcgacatcaacactggagggggcagcgccatc
caggctgtcatgcactttaactacaggaccatgaacagaggagaccaatccatcatctca
cagctcaggagagagatgggagatcagtggatgaactacatctccatcgctggtctgagg
actcacgctgacctggaggggaagctggtcaccgagctcatctacgtccacagcaagatg
ctcatcgccgacgacaacaccgtcatcatcggttctgctaacatcaacgaccgcagcatg
ctgggaaagagggacagcgaggtggcggtgatcgtggaggactcggagacggtgacgtcg
gtgatggacggacaggaataccaagctggaaaatacgctctgaagctccgactcgaatgt
ttcaagatgattctgggtgcaaacactgatccctccatcgacgtgtccgaccccatcagt
gaccagttctacaaggaggtctggatggccacctgcgctattaacgccaccatctaccag
agagttttccgctctctgccatcgagcgacgtccgtaacatcctggagctggagggctac
ctggccaagctgggtctggacaaggaggacccggcccgcgctcacgaggagctgaagaag
atccgcggcttcctcgtacagtttcctctgcagttcctgagcgagcagaacctgcttcct
cccatcggctccaaggaggccatggtgcccatggaggtctggacctga
DBGET
integrated database retrieval system
