Scomber japonicus (chub mackerel): 128382227
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Entry
128382227 CDS
T09718
Symbol
zcchc2
Name
(RefSeq) zinc finger CCHC domain-containing protein 2
KO
K22700
Zinc finger CCHC domain-containing protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
128382227 (zcchc2)
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Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
128382227
NCBI-ProteinID:
XP_053198187
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All DBs
Position
21:complement(22431622..22462579)
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AA seq
1147 aa
AA seq
DB search
MLKMKLPMKTGEEGGDETAEDESLDRSEHQQHIPGAVSHLSSVSDGLEDSPRPHVHPPQL
DKETVFEWFGLHLNPAKRVEFMCGLLHMCQPLELRFLGSYLEDLARKDYHVLRDFEFRAN
SPSDLGLLTDVIDPVVRSKLLVCLSLLGSDRRECAGILYRILSRVDPASFYRNYSLPPFR
DHPVHPPCQGGSVTGRTEQPCGVSSNDAAVGALEQLALLFTMASLHPAFHFHQREVVRGQ
LDKIELAVEEERRQSQLGVNAQTTELMGQKVDYLPSSALGMGDCTDSHPPCQSRRSSRWA
TQREAVHIEGIVLRGISRTRIDKEYNFEVKWSDSSSSSVTKTHLELENFLLKLPKDQCTE
SFEKGILRLLNQGDQYESREVEKNLRERFLSAPPVFRQTRKVCSFFNCDSSYSTKPTCCR
CNCQLGKAYQGDCSDASSQEEDLESYVQGHKKKHGTKSPCPGLSSAKGPQGDIRRGGHAA
ELNGPAERRKKGCTLRSSQEAEQHQDSEKRGHPVTKTKSRVLPTDRDKGKVKAAYVTNGG
LVAALPPQRKDGGSGPDTFGETSSESYSSPSSPQHRGPESLDSEDDNNKDTDSHSDDSSK
GPGPDMFFTHQTAPAVMGEVSSVHPLSPNNHQAHMEYSCPETSKDFPPLSFMPSLPYVLN
GAADPPLPIVPDGKPSSGPLMMQMPLVPPPVIGPGMVGDPEKRDMLSTFGIAAIGLHPSG
SPAVQPLVQRFKTVLSHSQGGPDGVSGSGSTPAAPQAPHQAPIRAISILSPGPTSFSSAP
QPSLPCQDPASVSSGLASSLPLGEPSHAKHPGLTLPSGLPSPYNMPPIPTSVMPTVGAPT
VTGIAPNPGHLQAAVPPAVPTHTPGPAPSPSPALTHSTAHSDCISYSNSSASCGNAPVAP
GNPITLQQTQQQQVAPQQPTPPPPQPQPQQPIGCGTCGCHNNCGGRGGSSNSVSGCQAPL
FFPTHQMAAAPRQVFSVQQPLFQLTSLCSSSYLTPAQPPHQANGAATLPPFFPTAPPPGH
PPPYGPLHTHPHSHGDVPSHMLGTQAAAVVAAAAANYNLQQQMAPAATFCQRVYQHVYPN
PLGMLPSATLGGGGVNKKNGNVSCYNCGVSGHYAQDCNQPSIDSTQQGGFRLKYAASHIS
EALDNAD
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagatgaagctaccgatgaaaacgggcgaggaaggaggcgacgagacggccgag
gacgagtcactggatcggtcggagcaccagcagcatatccccggggcggtctcccacctc
tcctctgtgtccgacgggctggaggattcgcccagacctcatgtgcacccaccccagctg
gacaaggagacagttttcgagtggttcggcctacatctaaaccccgctaagcgtgtcgag
ttcatgtgcgggctgctacatatgtgccagcctctggagctccgctttttgggatcttac
ttagaggatctggctagaaaagactatcatgttttacgggatttcgagtttcgggctaat
agcccgagcgatttggggttgttaacggacgtgatcgacccggtggttagatccaagctc
ttggtctgcctgtccctcctcgggtctgacaggagggagtgtgccgggatactctatcgg
atactgagccgtgtagatccggcctcgttctacagaaactactcccttcctccgttcagg
gatcacccggttcacccaccgtgtcagggcgggagtgtgaccggacggacagagcagccg
tgcggcgtctcctctaacgacgccgcggtaggagctctggagcagttggcgctgctgttc
actatggcctccctacacccagctttccatttccaccagcgggaggtggtccgagggcag
ctcgacaaaatagagctcgccgtagaagaggagagacgtcaaagtcagcttggagtaaac
gcccagacgacggaactgatgggccagaaggtggactacctgccctcctcagctcttggt
atgggggattgtacggactcccaccctccttgccagagccgacgctcaagccgctgggca
acgcaaagagaagcggtgcatatagagggaattgttctcaggggcatctctcggaccagg
atagacaaggaatacaactttgaggtgaagtggtcagactcttcttctagcagtgtgacc
aaaactcatctagaactggagaacttcctgcttaagcttcctaaggatcagtgcactgag
tctttcgaaaagggcatcctgagacttctgaaccaaggggaccagtatgagagcagagag
gtggagaagaacctcagggaaaggttcctgtcggcccctccagtattcagacagaccaga
aaggtctgcagcttcttcaattgtgactccagttactccaccaaacccacctgctgcaga
tgcaactgccagctgggaaaggcctaccaaggagactgctctgatgcctccagtcaggag
gaagatttagagtcgtatgttcagggacacaagaagaagcatgggaccaagagtccatgt
ccaggtctctctagtgccaaaggcccccagggggacatccggagggggggccatgctgcc
gagctcaacggtccggcggagaggaggaagaagggctgcacgctgaggagcagccaggag
gccgaacagcaccaggacagtgagaagagaggacacccagtcactaaaaccaagagcagg
gtgctgcccacagacagagataaggggaaggtgaaggcagcctatgtgactaatggtggt
ttggtagctgctctgccccctcagaggaaagatggaggttctggccctgatacgtttggt
gaaacatcgtcagagagctacagttctccatccagcccccaacacagaggaccagagagc
ctggacagcgaagacgacaacaacaaagatactgacagccattctgatgactccagcaaa
ggcccgggccccgacatgttcttcacccaccagactgctccagctgtgatgggggaggtc
tcctctgtccatcctctgtctcccaacaaccaccaggcccacatggagtactcctgccca
gagaccagcaaggacttcccccctctctccttcatgccttctctgccctatgtgctcaac
ggggccgccgaccctccgcttcctatcgtccctgatgggaagccttcttctgggccactg
atgatgcagatgcccctagtgcctccacccgtgattggccccggaatggtgggagacccc
gagaaaagggacatgctctcgacttttggcattgcagctatcgggcttcacccctcaggg
agccccgctgtccagcctctggttcagaggttcaaaacagttttatctcacagccaaggc
ggccccgatggagtatcaggaagtggttcgactcccgccgccccgcaggctcctcaccaa
gcccctataagagccatcagcatcttgtctcctggccccacatccttctcctctgctcct
cagccgtctctgccctgccaagacccagccagcgtcagctcaggcctggcttcctctctg
ccgctgggggagccttcacacgccaagcacccgggtttaacgttaccttctggcctgcct
tctccctacaacatgccccccatccccacctctgtcatgcccactgtaggagcacctaca
gtcactggaatagctccaaaccccgggcacttacaagcagctgttcctccagctgtgccc
acacacacccctggacctgcccccagccccagcccagcgcttactcacagcacggcacat
agcgactgtatatcctacagcaacagcagcgcttcctgtggaaatgctcctgtcgccccc
ggcaaccccattactcttcagcaaacccagcagcaacaggtggctccccagcagccgaca
ccgccgccaccacaaccgcagccgcaacaaccgattggctgcgggacctgcggctgtcac
aacaactgcggcggtcgaggcggcagcagcaacagcgtcagcggttgccaggcgcccctg
ttcttccctacccaccagatggcagcagcgccgcgccaggtgttcagtgttcagcagccc
ctcttccagctcacgagcctgtgcagcagcagctacctcaccccggcccaacctcctcat
caggccaacggcgccgccaccctcccacccttcttccccaccgccccgcctcccggccac
ccgcccccttacggccccctccacactcaccctcacagccacggagacgtgccgtcacac
atgctgggcacccaggcggcagcggtggtggccgcggcggcagcaaactacaacctccag
cagcagatggcaccggcggcgacattctgccagcgcgtctaccagcacgtgtacccgaat
cctctggggatgctgccctccgccacgctggggggcggcggagtcaataagaagaacggg
aacgtgtcctgttataactgcggagtgagcggacactacgctcaggactgcaaccaaccc
tccatagactccacacagcaaggtggcttccggttaaagtacgcagcctcccacatttca
gaagcacttgataacgctgactga
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