Scomber japonicus (chub mackerel): 128382248
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Entry
128382248 CDS
T09718
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128382248 (zeb1b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
128382248 (zeb1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
zf-H2C2_5
Homeodomain
zf-met
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
128382248
NCBI-ProteinID:
XP_053198213
LinkDB
All DBs
Position
21:21630119..21679251
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AA seq
1120 aa
AA seq
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MADGPRCKRRKQANPRRNNVTNYNNVVEAGSESDDEDKLHIVEEEGSLADGADCDSTLPD
EEHPRERCWDRVKEDCASDGEDDSTDALVEEMLQQGDTAVIYPEAPEDEPQRHGTPDASI
HDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEECFSCPECSYTFAHRSQLE
RHMTAHKPGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISLISVNGKPRLANSKTQTQGPTPILPTSPSVLRTQIREKLEHS
KPLQEQLPLNQIKSEPVDFEYKPTVMTSPTVAGMNGGVFNGGAAAPLHGTVQAVVLPTVG
LVSPISINLADLQNALKVAVDGNVIRQVLESNAKGQGQMNSGLTTGTLHPTQQQLISAIS
LPIVGQDGNAKIIINYSLDPNQGQLTAQNLKKEPEPISAAQLTETYKSQKLPEDLTIKGT
RPTETKEEEMTTKTCLLCDNCPGGLEALHALKHCKKDGLKLNGAGLDKSESAVAALLSEG
GLCNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLGAPT
PPSEEEDTCDANSVVSLVPGKDMATMGPSVTQDSPTEATPAEVNGSHSSPASPSPLNLTA
DGPVPAQPPQSTEGPLDLSLPKPDREETERALTKACVYPSPSSGSTNQDEPLNLTCTKKE
ASPLSAMSSRHIAMYASQPSANPLNIVTTQLPTLVTIGEQGHMQCLRALTTNNKQTILIP
QLAYTYTTTANSPAGTETHETIHLNGIKEEKLDTGSEGVSTLEEHNDSDSGPARKKMKKT
DSGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKKETQSQGEGSESPEVDGEARAELEALSQTLPL
RLAPSQLDSDERGSSTREDEESEEYEEEEEEGAIDMDDIQVVQIGDEGGDEEEEEERNEE
EMETVAAEKTEIEEEEEADTRQEAEEEEQVVHGGDKEEEGEEEEVKVEGEEAMATEEGLT
EEGRAEEEEEEVTEESGGETNRNTVSEDEKQTQQEKGDTD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
accaactacaacaatgtggtggaggccggctcggagtcagatgacgaggacaagctgcac
atcgtggaggaggaaggcagcctggcggacggggccgactgcgacagcaccctgccagac
gaggagcaccccagggagcgctgctgggaccgagtgaaggaggactgtgcgtcagacggc
gaggatgacagcacagacgccttggtggaggagatgctccagcaaggagacacggcagtc
atctacccagaagccccggaggacgagccccaacgccacggcaccccagacgccagcatc
catgacgagaacggaactccagactccttctctcagctgctcacctgtccgtactgcgcg
cgcggctacaagcgttacagctccctgaaggaacacatcaaatatcggcacgagaagacc
gaggaatgcttcagctgccccgagtgcagctacacctttgcacaccgctctcaactggag
agacacatgacggcccacaaacccggacgggatcagagacacatcacacagtcgggaggc
aatcgcaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctgaag
gagcacctacgcatccacagcggagagaaaccctacgagtgttccaactgcaagaagcgg
ttctcccactcgggctcgtacagctcccacatcagcagtaagaagtgcatcagcctcatc
tcagtcaacggcaaaccacgcttggccaacagcaaaacccagacccagggtccaacacca
atcctccccacgtcaccctctgtcctccgcacccagatcagggagaagctggagcacagc
aagcccctacaggagcagctgcccctcaaccagatcaagagcgagcctgtggacttcgag
tacaagccgacggtgatgacgtctccgactgtggctggcatgaacggcggggttttcaac
ggaggcgccgcagctcccctgcatggcacagtgcaggccgtggtcctgcccactgtgggt
ctggtgtcgccaatcagcatcaacctagcagacctgcagaacgctctcaaagtggctgtg
gacggtaacgtcattcgccaggtgctggaaagcaacgccaaaggccaggggcagatgaac
tctgggttaaccactggaacgctccacccaacgcagcagcaactcatctcagccatcagt
ctgcctattgtgggtcaggatggaaatgcaaaaatcattataaactacagcttggacccc
aaccagggccagctcacagcccaaaacctgaagaaagagcctgagccgatatcagcagct
cagctcactgagacctacaagtcccagaaactcccagaagatcttaccatcaagggcacc
aggcccactgagactaaagaagaggaaatgaccactaaaacttgtctcctgtgtgataac
tgtcccggggggctggaagcactgcatgccctcaagcactgcaagaaggatggtctcaag
ctgaacggagcaggcctggataagtctgagtctgctgttgctgctctgctgtcagaggga
ggactttgcaaccagcccaagaacctcttgtccctgctcaaggcttactttgccttgaac
gctgagcccaccaaggatgagctggccaagatctcagactctgtcagcctgccaatccat
gtggtcaagaagtggtttgacaaaatgcaggaaggtcagatatcactaggtgccccaacc
cctccttcagaggaagaggatacctgtgatgctaacagtgtggtgtctctggtcccaggg
aaggacatggccactatgggtccttctgtgacccaggacagccctacagaagcaacccca
gccgaggttaacggctcccacagctcccccgcctccccctcgccactaaacctgacagct
gacggtcccgtcccagcccagcccccccagagcactgagggacccctagacttgtcgctg
ccaaagcccgacagagaagaaacagagagagcgttgactaaagcctgtgtttacccctcc
ccttcctctggctctaccaatcaggatgaacctctcaatctaacttgcacaaagaaagag
gcatcgccactctcagccatgagcagccgccatattgcaatgtacgccagccagccaagt
gccaaccccctcaacatagtgaccactcagctccccactctggtgactatcggcgaacag
ggccacatgcaatgcctaagggccctaaccaccaacaacaaacagactatcctgatccct
cagctggcttacacttataccactacagctaacagccctgctgggacagagacacacgaa
accatccacctcaacggcatcaaggaggagaagcttgacacaggctcagaaggtgtgtcc
actttagaggagcacaacgactccgactcgggccccgcaaggaagaagatgaagaagacg
gacagcggcatgtacgcctgcgacctgtgcgacaagatcttccagaagagcagctcgctg
ctcagacacaaatacgaacacacagggaagagacctcacgagtgcggcatctgcaccaag
gccttcaaacacaaacaccacttgatcgaacacatgcgactccactcgggggagaagccg
taccagtgcgacaagtgcggcaagcgcttctcccattcgggctcctactcccagcacatg
aaccaccgctactcctactgcaagaaggagacgcagagccaaggagagggcagcgagagc
cccgaggtggacggcgaggcccgggccgagctggaggccttgagccagacgctgcctctg
cgcctggctccgtcccagctggactcggacgagcgagggagcagcaccagagaggatgag
gagagcgaggagtacgaggaggaggaggaagagggcgcaattgacatggatgacatccag
gtggtgcagataggagatgaaggaggggatgaggaggaggaggaagagaggaatgaggaa
gagatggagactgtagcggcggagaagacagagatagaggaggaagaggaggctgacaca
aggcaggaggcggaggaggaggagcaggtggtgcacgggggtgataaagaggaggagggg
gaggaggaggaagtcaaggtggaaggtgaagaggcgatggctacagaagaagggttgaca
gaagagggaagagcagaggaggaggaggaggaggtcacggaggagagcggaggcgaaaca
aacaggaacacggtctctgaagacgagaagcagacgcagcaggagaaaggagatactgac
taa
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