Scomber japonicus (chub mackerel): 128382267
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Entry
128382267 CDS
T09718
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128382267 (ptbp2a)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128382267 (ptbp2a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
128382267
NCBI-ProteinID:
XP_053198238
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All DBs
Position
21:24515466..24532817
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AA seq
518 aa
AA seq
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MDGISDVAVGVKRGSDELSMYNSPNSGMSSISDGASNGSDSKKQKVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYTTVTPHIRNVPV
FIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDSTVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDFAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVTEDDLRLLFSNAGGTVKAFKFFQDRKM
SLIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggagtgaagagaggatcagatgagctgagtatg
tacaacagtcccaactctggcatgagcagtatcagtgacggggcttccaatggcagtgac
agtaaaaagcagaaggtggaggaggccccaccttctcgcgtgctccacatcagaaagcta
cccaacgaggcctcagagacagaagtcatcgccctcggcttaccttttggcaaagtcacc
aacatcctcacacttaaggggaagaaccaggcattcttagagatgggcacagaggaggca
gccatcaccatggtgaactactacaccacagtaactcctcacatccgcaacgttcccgtc
tttatccagtactccaatcacaaagaactcaaaaccgacgctggcaatcagcggacccag
gcggtgttacaggcggtgtcagctgtccagtccggcggctcacctagctcagacgtacag
gaggctctggctgcagcctccagtcctgtgctgaggatcatcatcgacaacatgttctac
cccgtaacactggacgtactgcaacagattttctccaagtttggcacagtcatgaagata
atcacatttaccaagaacaatcagttccaggctcttctgcagttcagtgatcctgtcaat
gcacagcaggccaagctggctctggacggtcagaacatctacaactcatgctgcacgctg
cgtatcgacttctccaagctggtcaacctaaacgtcaaatacaacaacgacaagagtcgc
gactacacgcgacccgagctgccagctggagacggccagcccagccttgactccacagtg
gctgcagccttcagcaaagactccaactccctcctcggtaagatcccaggagccctgaac
cctctgagcgcggcggcggcagccgctgctgctgcagggagggtggccctcgctggacag
gcaggatctagcggggtgcttctggtcagcaacctcaacgaggagatggttacgccccaa
agtctgtttaccctcttcggagtctacggtgatgtccagagggtgaaaatcctttacaat
aagaaggacagcgctctcattcagatgtcagacgccaaccaggctcagctagcaatgagc
cacctgaacggccagaagatgtacgggaagatcatccgtgtgacgctgtccaagcaccag
acggtggcgctgcctcgcgatggcctggacgaccagggcctgaccaaggacttcgccaac
tccccgctccaccgcttcaagaaacccggatccaaaaactttcagaacatcttcccaccg
tctgccacactccacctctccaacatcccacaagatgtgacggaggatgacctgcggctg
ctgttctccaatgctggaggcactgtgaaagcattcaagtttttccaggatcgtaaaatg
tctttgatccagatgtcgacagtggaggaggcgattcaggccttgatcgacctccacaac
tacaacatgggcggcaaccagcacctgagagtctccttctccaagtccaccatttaa
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