Scomber japonicus (chub mackerel): 128382353
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Entry
128382353 CDS
T09718
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128382353
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128382353
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
DUF3807
DUF7517
Cytomega_UL84
Radial_spoke_3
TMEM214
Zip
T6SS_Tle1-like_C
PEX11
DDHD
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
128382353
NCBI-ProteinID:
XP_053198325
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Position
21:18128626..18137577
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AA seq
760 aa
AA seq
DB search
MFSRLKGLLSGPQVPDASKTTTAAPGPAPEPAPKPAPPPGPEKEEKPADKENEAKKEDKP
QGKSSAAVPLLESTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPTAAPANPDQAGPEGQ
EDPPPPPPPIVINKYSDEQLRFIVQRMRERLLIYEEKVNDQYASSPEITPPVTPLLGKDH
YAQVIEERKRQAEEDRIKKEEADKKKKEEQEKKKKEAEEKKKEEEEKKKAEGKEMKEEKK
ARLIATAWSCVDVVLNPIEDMMDSVLGSTIDPFTDRRYIAWMSLVTLAFNYNTWFITARL
CFPYHTETAIPYWFAADLLADFIYLIDSIFFQPRKQFVKGGDIIKDRQMTKMNYRQSERF
LTEMLCLVPFDLLYLQFGFKSIFRANRLLKAESFFEFSDRLESIMAKAYIWRVIRTIGYL
LFMLHLNACFYYVASEYQGIGGTKWVYSGLGSAYLRCYYYAVRSLINIGGLNEPHTVFEI
TFQMTNFFTGVFVFSSLIGQMRDVIGAATAGQTYFRSSMDNTVDYMVTNHIPSVVQNRVR
TWYTYTWDAQGMLDEGELLDKMPLVMRTAIAVDINLSTFQKIELFKGCDQQMLVDMLLRL
KSIIYLPGDFVVKKGDIGKEMYIIKSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSSK
DGGNRRTANVKAYGFANLFVLEKKDLFDILVHYPESQKVLARKGKKLMKAKGPAAAKAEE
EKKKGLALFGPKPPTPKLLRAFGGNINQKMIEKLKSASSG
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaggttaaagggtctccttagtggcccacaggtgccagatgcttctaaaacc
accacagcagctcctggtccggctccagaaccagctccgaaacctgctccacctccagga
ccagaaaaggaggagaagccagccgataaggagaatgaggccaagaaagaggacaaacca
cagggtaagtcatctgctgctgtacctctcttagaatcaactccggccccagcccctgcc
ccggctcctgccccagctcctgccccagctcctgccccagctcctgccccagctcccgct
ccagctccagcccctacagcagccccagctaaccctgatcaagctggacctgagggacag
gaggacccccctcctccacctccacccatagtcatcaacaagtactcagatgagcagctc
agatttatagtccaacggatgagagaaagactgttgatctacgaggagaaagtgaatgat
cagtacgcttcatccccagaaatcacccctcctgtcacaccattgctgggcaaagaccac
tacgcacaagtcatcgaggagaggaaaagacaagcagaggaggatcgaataaagaaggag
gaggctgataagaagaagaaagaggagcaggagaagaaaaagaaggaggcagaggagaag
aagaaggaggaggaggagaaaaagaaagcagaaggtaaagaaatgaaggaggaaaagaag
gccaggcttattgccactgcctggtcttgtgtagacgttgtgctgaacccaatagaggac
atgatggactctgtgctgggtagcaccatcgaccctttcacagaccgccgctacatcgcc
tggatgagccttgtgactcttgccttcaactacaacacctggttcatcacagcccgcctg
tgtttcccataccacactgagaccgccatcccctactggttcgcagcagacttgctggcc
gacttcatctatctaatagacagcatcttcttccagccccgcaaacagtttgtcaaagga
ggagacatcataaaagatagacagatgaccaagatgaactacagacaatcagagagattt
ctgacagagatgttgtgccttgtacctttcgacttgctgtatttacagtttggattcaaa
tccattttcagagccaatcgtctgctgaaggcagagtcgtttttcgagttcagcgaccgt
ctagaaagcatcatggccaaggcttacatctggagagtgattcgcaccatcggctatctt
ctcttcatgctccacctcaacgcctgcttttactacgtggcttcagaataccagggcatc
ggcgggactaaatgggtttactctggcctgggcagcgcgtacctgcgatgttactactat
gctgtccgcagtctgatcaacatcgggggtcttaacgaaccccacaccgtctttgagatt
acctttcagatgactaactttttcacgggcgtctttgtgttctccagtttgattggacag
atgagagatgtcattggtgcagccacagcagggcagacctacttccgatcctccatggac
aacactgtagactacatggtgaccaaccacatcccctcagtggtgcagaacagagtccga
acttggtacacctacacctgggacgctcagggcatgctggacgagggtgaacttctggat
aagatgcctttggtgatgagaactgcaatcgctgtggacatcaacctgtcaacttttcag
aagatcgaacttttcaagggctgtgaccagcagatgttggttgatatgttactgaggctt
aagtctatcatctatctaccaggagattttgtcgtaaagaaaggtgacattggtaaagag
atgtacatcatcaagagtggagcggtgcaggtggttggaggtcctgacaacagtattgtc
tttgtcaccctgaaggctggctgtgtgtttggagaaatcagtctgttgcaatcatccaaa
gatggaggaaacaggcgtacagctaacgtcaaagcttacggcttcgctaacctctttgtc
ctggagaagaaagacctctttgatattctcgtccactacccagagtctcagaaagtgctg
gccaggaagggaaagaaactaatgaaggccaagggaccagcagcagctaaagctgaggag
gaaaagaagaaaggacttgcactgtttggacccaaaccaccaacacccaaattgctccgt
gcttttggtggaaatattaaccaaaaaatgatagaaaaattgaagagtgcttcttctggc
tag
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