Scomber japonicus (chub mackerel): 128382354
Help
Entry
128382354 CDS
T09718
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128382354
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128382354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
CAF1A_acidic
AP-5_subunit_s1
Motif
Other DBs
NCBI-GeneID:
128382354
NCBI-ProteinID:
XP_053198326
LinkDB
All DBs
Position
21:18138854..18148966
Genome browser
AA seq
700 aa
AA seq
DB search
MFSRLKNLVGAPVPPPAQAATPPSTPAPPPKLLHLLPLLPLLLQLQQQVMLLPIQRGLKD
VVFPTGLYKSYDQEEPPPSPPIVYSRYTDEMVRHVTKTLRERTEMLIEKVTDPYATSPEI
TPPVTPILKKEDYIKLKEEERIAKEEADKKKAEDAAKKAEEKKKKDEEKKLEAEKKAEED
RLAEEARKKAKLLPDFNCACFDALFLPLEEKMDTFLGNTIDPFTDRRYICWLALVAVAYN
YNAWFCTARLAFPYHNATSNPIWIFFDVLSDVVNVIDILLWQPRLQFVKGGDIIKERTMT
KVHYRNSDQFKVDLVSIIPFDLLSVYFGFSSFYRLNRFIRVGSFFEFSDRLESIMAKAYI
WRVARTTGYLLYVLHLNACVYYVASVYVGLGTSLWVYNGVGSAYLRSYYFAVRSLINIGG
LPEPTTVFEISFQMINFFTGVFVFSSLIGQMRDVIGAATAGQTYFRASMDGCVDYMNTYT
IPRQVQNRVRMWYNYTWAAQGMLDEGELLDKMPLVMKTAIAVDINLATFQKIALFQGCDQ
QMLVDMLLRLKSIVYLPGDFVVKKGDIGKEMYIIKSGAVQVVGGPDNSIVFVTLKAGAVF
GEISLLQSAKDGGNRRTANVKAHGFANLFVLEKKDLFDILVHYPQSQKVLARKGKKLVKA
KAPAGGNEDKPKANTLFGPKPPTPKLLRLFGNLRKAKVKF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaggttgaaaaacttggtaggggcgcccgtgcctccccctgcccaagctgct
accccaccttccaccccagctccaccaccaaagctcctgcacctgctgcccctgctcccc
ctgctgctccagctgcagcagcaggtgatgctcctgccaatccagagggggctgaaggat
gttgtatttcctactggtctctacaaatcatacgatcaagaagaacctcctccgtctcct
cctattgtctactctcgttacacagatgaaatggtcagacatgtgaccaagacattaaga
gagcgcacggagatgctcatagagaaagtcaccgacccgtatgccacttctccagagatc
accccacctgtcacgcccattctgaagaaggaggactacatcaaattgaaggaggaagag
cgcatcgccaaagaggaagcggacaagaagaaggcagaggatgcggctaaaaaggcagag
gagaagaagaaaaaggatgaggagaagaagctggaggcggagaagaaagctgaggaggac
aggctcgcggaggaggccaggaaaaaagccaagctcctcccagacttcaactgcgcctgc
ttcgatgccctctttcttccattagaggagaagatggatacattcctgggaaacaccata
gaccctttcacagatcgtcgatatatttgctggctggctttagtagcagtggcatacaac
tacaacgcttggttttgcactgctcgactggccttcccttaccacaatgctacttctaac
cccatttggatattttttgacgttcttagtgacgtagtgaatgtcattgacattttgctg
tggcaaccccgtcttcagtttgtcaaaggtggagacattattaaagaaagaaccatgact
aaggtacattatcgtaattcggaccaatttaaggttgatttggtcagcatcatccccttt
gacctcctctccgtgtattttggattctcttccttttaccgactcaaccgcttcatcagg
gtgggttctttctttgagttcagcgatcggctggagagtatcatggcaaaggcctacata
tggagagttgctcgcaccacaggctacctgctctacgtcctgcatctcaatgcctgtgtg
tactacgttgcctcagtgtacgtgggtctaggaacatccttatgggtgtataatggagtt
ggatcagcgtacctgcgtagttactactttgctgtccgcagtctgatcaacatcgggggt
cttccagagcctacaaccgtctttgagattagctttcagatgattaacttcttcactggt
gtctttgtgttttccagtttgattggacagatgagagatgtcataggagctgcaacagca
ggtcagacatatttccgggcatcaatggacggctgtgttgattacatgaacacatatacg
atccccagacaagtccagaacagagtcaggatgtggtacaactacacttgggctgctcag
ggcatgttggatgagggtgagctgctggataagatgcctctggtgatgaaaacggccatc
gctgtggacatcaacctggccactttccagaagatcgcactgtttcagggttgtgaccag
cagatgttggtggacatgttgctgagactcaagtctattgtttatctaccaggagatttt
gttgtgaaaaaaggtgacattggtaaagagatgtacatcatcaagagtggagcggtgcag
gtggtgggtggacctgacaacagtattgtgtttgtcaccctgaaggctggcgctgtgttt
ggagaaatcagtttactacagtctgctaaagatggaggaaacaggcgcacagctaacgta
aaagcacatggcttcgctaacctctttgtcctggaaaagaaggacttgtttgatattctc
gtccactacccacagtctcagaaagtgctggccaggaagggaaagaaactggtcaaagct
aaagcccctgcaggaggaaatgaggataagccaaaagccaacactctcttcggaccgaaa
ccaccaacaccgaagctgctcagactcttcggcaatttacgtaaagccaaggtaaagttt
taa
DBGET
integrated database retrieval system
