Scomber japonicus (chub mackerel): 128382423
Help
Entry
128382423 CDS
T09718
Symbol
pola1
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128382423 (pola1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128382423 (pola1)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
128382423 (pola1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
128382423 (pola1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
128382423
NCBI-ProteinID:
XP_053198384
LinkDB
All DBs
Position
21:14812635..14865635
Genome browser
AA seq
1470 aa
AA seq
DB search
MAPISNPDKDMDGDDGGDVCSLAKSRSRREKREKVGRKSALEQLKKAKKGEKIKYEVEEF
AGVYEEVDEEQYSKMVRDRQEDDWIIDDDGTGYVEDGREIFDDELHDDVVEKNKGKVGAK
REDSKKNVKKTAVAKPNSIKSLFMNSNVKKQAEKDVDLSKDDLLGDILQDLHSEKPSLLT
PPPVVTLKKKKSLGSPMNPFSIKPQMPKESPSATGLKAKVIRPPPPDLTPRPSARRPPST
PVLTVEKERTEAEEVDEEKGNDALAFDEVDFDEPMEVELEEEKPEVREEAKTAASAAAVK
VEPKVELQDPVLISSRIGSSWGQEEESEVSEAPAEVQVDSSKLPLAEGPDGEQVFRFYWL
DAFEDQYNQPGVVYLFGKVWIESALSHVSCCVSVKNIERTMYFLPREYKVNPKTGEVSDT
PVGLMDVYQEFNELSEKFKIMKFKSKKVDRNYAFEIPDVPTQCEYLEVRYSAEFPALPSD
LKGATFSHIFGTNTSSLEHFLLSRKIKGPCWLDIKTPQLMNQPVSWCKVEAMALRSDLVT
VVKDLSPPPITVMSISLKTVQNPKTHQNEIVSLAALVHYQFPMDKAPPQPPYQSHFCVIS
KPADCIFPYDFKDAVKKKNGKVEIAATERTLLGFFLAKMHKIDPDVLVGHDIFGFDLEVL
LQRINVCKVPHWSKIGRLRRSNMPKLGGRGSFAEKSATCGRLVCDVEISAKELIRCKSYH
LTELVAQLLKKERVTVPQEDIKNLYSDSPHLLYLLELTWTDAKLILQIMCELNVLPLALQ
ITNIAGNVMSRTLMGGRAERNEFLLLHAFHDKNYIVPDKPSFKKTQLETVEGEEDVNAGK
GKRKKKAAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQREAYNAQKKN
EEDESEEIPEIPDSSLDMGILPKEIRKLVERRRQVKQLMKAQDINPDLYLQYDIRQKALK
LTANSMYGCLGFSYSRFYAKPLAALVTHKGREILMHTKDMVQKMNLEVIYGDTDSIMINT
NSKSLDEVFKLGNKVKAEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEQQGEGRFTV
KQELKGLDIVRRDWCDLAKECGNYVIGQILSDQTRDVIVENIQKHLVEMGEKVASGTIPL
NLYEINKALTKDPQDYPDKKSLPHVHVALWINSQGGRRVKAGDTVSYIICKDGSTLAASQ
RAYSIEQLQKQEGLSLDTQYYLAQQVHPVVSRICDPIEGIDSVLIATWLGLDPGQFRTQQ
QYQREEEADGMLGAPVQLTDEERYKDCERFTFTCPQCGTDNIYDNVFEGAGVKVEPSLMR
CCHIPCSSRPIDYVVNISNKLLHDIRRHIKKYYSGWLVCEDQACQNRTRRLPIAFSRHGP
ICPACTRATLRPEYSEKALYNQLCFYRFIFDWDHAVAKVLQGDEKKSVSRMNKEKDVYRK
LKEVLDKALATSGYSEINLAKLFQAFSSLK
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atggctccgatatcaaacccagacaaagacatggacggcgatgatggaggagatgtctgt
agtttggccaagtcacgctccagacgggagaagagagagaaggtggggaggaagtctgct
ctggagcagctcaagaaagccaagaagggagaaaagatcaaatatgaggtggaggagttt
gccggcgtgtatgaggaggtggatgaggagcagtactcgaagatggtccgtgacagacaa
gaggatgactggattatcgatgatgatggaaccggatatgtggaggatggaagagaaatc
tttgatgacgaattgcatgatgatgtagtagaaaaaaacaaaggaaaagtgggagccaag
agagaagactcgaagaaaaatgtgaaaaaaactgccgtagcaaagcccaacagcattaag
agcctattcatgaacagtaatgtcaagaagcaagctgagaaagacgtggacctgtccaaa
gatgacctattaggagatatcttacaggacctgcactctgagaaaccgagtcttctcact
cctccaccagtcgtcactctgaagaaaaagaagtctcttggatcacccatgaatccattc
tccatcaaacctcagatgccaaaggagtcaccctcagctacagggttaaaggctaaagtg
atccgtccaccacctcctgacctaacccccaggccatcagcccgccgtcctccttctaca
cctgttcttactgtggagaaggaaagaacagaagcagaggaggtagacgaagagaaaggg
aatgatgctctagcatttgatgaggtggactttgatgagcccatggaggttgagcttgag
gaggaaaagcctgaagttagagaagaagctaaaacggcagcatcagcagctgcagttaaa
gtggagcccaaagtggagctgcaggaccctgtcctcatatccagcaggattggaagttct
tggggacaagaggaggagagcgaagtcagtgaggctccagcagaggtacaggtggactcc
agcaaactcccgctggcggaagggcctgacggagagcaggttttcagattctattggttg
gatgcgtttgaagaccaatataaccaaccaggtgtggtgtacctgtttggaaaggtgtgg
atcgagtcagccttgtctcacgtcagctgctgcgtgtccgtcaagaacattgagcggacc
atgtacttcctgcctcgtgaatataaagtgaaccccaagactggagaggtgtcggacaca
cctgtgggactgatggatgtttaccaggagttcaatgagctctctgagaagttcaagatc
atgaagttcaagtccaagaaagtagatcggaactatgcctttgaaatacctgatgtgcct
actcagtgcgagtacctggaagtcagatattctgctgagttccctgcgctgccttctgac
cttaagggggcgaccttttcccacatttttggaaccaacacctccagtctggagcacttt
ctcctcagcaggaagattaaagggccgtgctggctggacatcaagacaccacagctgatg
aaccagccagtcagctggtgtaaggtggaggctatggcactgaggagtgacctggtcact
gtggtcaaagacttgtcaccaccacccattaccgtcatgtccatcagcctcaagaccgtc
cagaaccccaaaacacatcaaaacgagattgtttccctggcggcacttgttcactatcag
tttcccatggataaagctccacctcagcctccctaccagtcacatttctgtgtgatcagt
aaacctgctgactgtatcttcccgtacgacttcaaagacgctgtgaagaagaaaaatgga
aaagtggagatagctgctacggagcggactctgctcggcttctttctagccaagatgcac
aaaattgatcctgatgtgcttgtgggtcacgacatcttcggttttgacctggaagtgctt
ctccagcgcatcaatgtgtgcaaagttccccactggtctaagatcggacgcctcaggagg
tccaacatgcccaaattagggggtcgtggctcctttgcagagaagagcgccacctgcggc
cgtctggtgtgtgatgtcgagatctcagctaaagagctgattcgctgcaaaagttaccat
ctgaccgaactggtcgcacagttgctcaagaaggagagagttactgtccctcaagaagat
atcaagaatctatacagtgactctcctcacctgctctacctgctggagttgacatggaca
gacgccaagctaatcctccagatcatgtgtgagctcaacgtgctgccactggccctgcag
atcaccaacatcgccggcaacgtcatgtctcgtactctgatgggtggccgcgctgagagg
aatgagttcctgttgcttcacgccttccatgataagaactacattgtccctgacaaaccc
tccttcaaaaagacccaactggagacggttgagggagaggaagatgtgaatgcagggaaa
ggcaagcgtaagaagaaggcagcctatgctggaggtctggtgctggatcctaaagttggt
ttctatgacaagtttgtgttgctgctcgacttcaacagcctgtatccgtctatcatccag
gagttcaacatctgcttcaccactgtgcagagagaggcgtacaatgcacagaagaagaat
gaggaggatgagtctgaagagattcctgagatcccagattccagcctggatatgggaatc
ctgcccaaggaaatcaggaagctggtggagagacgtagacaagtgaagcagctgatgaaa
gcacaagacatcaacccggacctctacctgcagtatgatatccgtcagaaggctctgaag
ctgactgctaacagtatgtatggctgcctgggattcagctacagccgcttctacgccaag
ccgctggctgccctggtcacacacaagggtagagagattctgatgcacacaaaagacatg
gttcagaagatgaatctggaagtcatttacggagatactgactccatcatgatcaacacc
aacagcaagtccctggatgaagtctttaagctgggcaataaggtgaaggccgaagtaaac
aagctgtacaaactactggagatcgacattgacggcgtgtttaagtcacttttattgctg
aagaagaagaaatatgcagccctggtggtggagcagcaaggcgaaggccgcttcaccgtc
aagcaggagctaaaagggttggacattgtccgcagagattggtgtgacctggccaaggag
tgcggcaactacgtgattggtcagatcttgtcagaccagactcgtgatgtcattgtggag
aacatccaaaaacacctggtggagatgggagagaaggtagcaagcggaaccataccactc
aacctgtatgagataaacaaggcactgactaaagatcctcaggactatccagataagaag
agcctccctcatgtgcatgtggctctgtggattaactcccagggtggacgccgagtcaaa
gctggagatacagtctcttacatcatctgcaaggacggctccacgctagcagccagtcag
agagcctacagtatagagcagctccagaagcaggagggtctcagtctggacactcagtac
tacctggcccagcaagtccaccctgtggtgtcccgtatctgcgaccccattgagggtatc
gatagcgtgctcatagccacatggctgggtctggaccccggtcagttccggactcagcag
cagtaccagagagaggaagaggcggatggcatgctgggagctccagtccagctgactgat
gaggagcgctacaaagactgtgagaggtttactttcacctgtcctcagtgtggcactgac
aacatctacgacaacgtcttcgaaggagctggagtaaaggtggagcccagcttgatgcgc
tgctgtcacatcccctgcagtagccgccccatcgactacgtcgtcaacatcagcaacaaa
ctgcttcatgacatccgccggcacatcaaaaaatactactctggctggttggtgtgtgag
gaccaggcttgtcagaacaggaccagacgtttacccattgccttctcccgccacggaccc
atctgccctgcctgcaccagagccaccctgagacccgagtactcagagaaggccctctac
aaccagctgtgcttctacaggttcatctttgactgggaccacgctgttgccaaagtacta
cagggtgatgagaaaaaatctgtttcccggatgaacaaagaaaaggacgtgtatcggaag
ctgaaggaagtactagacaaagcgctcgccaccagcgggtactcagagattaacctggcc
aaactcttccaggccttctcctccctcaagtaa
DBGET
integrated database retrieval system
