Scomber japonicus (chub mackerel): 128382451
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Entry
128382451 CDS
T09718
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03030
DNA replication
sjo03410
Base excision repair
sjo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128382451 (fen1)
03410 Base excision repair
128382451 (fen1)
03450 Non-homologous end-joining
128382451 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjo03032
]
128382451 (fen1)
03400 DNA repair and recombination proteins [BR:
sjo03400
]
128382451 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjo04147
]
128382451 (fen1)
DNA replication proteins [BR:
sjo03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
128382451 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
128382451 (fen1)
DNA repair and recombination proteins [BR:
sjo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
128382451 (fen1)
Exosome [BR:
sjo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128382451 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
128382451
NCBI-ProteinID:
XP_053198416
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All DBs
Position
21:17464696..17470822
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AA seq
380 aa
AA seq
DB search
MGIHGLAKLIADQAPGAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQMKSGELEKRVERRAEAEKLLAQAQELGEQ
ENIDKFSKRLVKVTRQHNDECKKLLTLMGVPYIEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPIQEFHLSRVMQEIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIRQHGCIEEILENIDSNKHPAPEDWLYKEARGLFLTPEVVDCSTVELKWNE
PDDEGLIQFMCTEKQFSEDRIRNGCKKILKSRQGSTQGRLDSFFTVTGSLSSKRKEPEIK
GSAKKKQKTGATPGKFRKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacacggacttgccaagctgattgctgaccaggcgcctggtgctataaaagaa
caagacatcaagaactacttcggaaggaaaattgctatagatgcctctatgtgcatctac
cagttcctgattgcagtgcgacaggatggcaacgtgctgcagaatgaggatggagagacg
acaagccacctgatgggaatgttctaccggacaatccgcatgctggagcacggcatcaaa
cctgtgtatgtgtttgatggcaaacccccacagatgaagtcaggagagctggagaagaga
gtggagagacgggcggaagctgagaagttgcttgcacaagcccaggaactgggtgaacaa
gagaacattgacaaattctccaagcgtctggtaaaagtcactaggcagcataatgatgag
tgcaagaagctgctgaccttgatgggagtcccttacatcgaggctccatgtgaggctgag
gccagctgtgccgctctagtgaaagcaggcaaggtctttgccacagcaacagaggatatg
gacgggttgacctttgggacgaacgtcctgctcagacacctcactgccagcgaagcaaag
aaacttcctattcaagaattccaccttagtcgcgtcatgcaggaaattggcctgacaaat
gaacagttcatagacctgtgtatcctgctgggctgtgactactgtggcaccatcaaggga
atcggccccaagagagccattgacctgatcagacagcacggctgcatcgaggaaatccta
gaaaacattgactctaataagcaccctgctccagaggactggttgtacaaggaggccagg
ggcttgtttttgactcccgaggtggtggattgttccacagtggagctgaagtggaatgaa
ccggatgatgagggactgatccagttcatgtgcactgagaaacaattcagtgaggacaga
atccgtaatggttgtaagaagatcttaaagagccggcagggcagcacacagggacgactg
gactctttcttcactgtcacaggatctctttcctccaaacggaaggagcctgaaattaaa
ggatcagctaagaagaagcagaagactggagctacgcctggcaaatttagaaagggcaaa
tag
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