Scomber japonicus (chub mackerel): 128382453
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Entry
128382453 CDS
T09718
Symbol
dync2i1
Name
(RefSeq) LOW QUALITY PROTEIN: cytoplasmic dynein 2 intermediate chain 1
KO
K22869
WD repeat-containing protein 60
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sjo03037
]
128382453 (dync2i1)
Cilium and associated proteins [BR:
sjo03037
]
Primary cilia and associated proteins
Dynein and associated proteins
128382453 (dync2i1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_RFWD3
WD40
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
128382453
NCBI-ProteinID:
XP_053198418
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All DBs
Position
21:complement(10412975..10419979)
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AA seq
1034 aa
AA seq
DB search
MDSDKKITKEDTWKPADLRRHLREEGHGDDYARRRDETGRKHRGGESTERHRRDPERESR
RERDEHGERESTRDRRGEEEKDRYVDRRKEGSRDRRGDKERDRREDREKRRERERLEDAD
KYRNDSRENRDRRRDKEEKLERERDKERDRDKEKNRDRNGQRHSEEYRNKRRENGDKERR
REERDREHRTERERRRHEESGEGERHRVEKHDREHRDQHRERDRYKDEYEVTRNDKERRE
RHEERKHSELKEERASKEEHRKHKEDRERRHRERGYHDEKRKHDSDSRGHQALKGLDEEV
RHRERRHRQDEDPERKHRDRTSSNKSSSDKSHETKTMKTHEVDMLSEHWTASAIDVGDTE
EPVVNDENLADQEYEDDFEDYEDDFEEMDESTNEGEEQEEPDHPGVGEEIEELTPQRKEE
IKAIRRAMDEENERIGTAQSRESMSREEEDRAKWSRGAEKNQRRSSPRGKFIDFVAAKQR
EVSKKVASKQKKRSIELLRLIDLDFSMTVSLLDLPPVNEYDMYIRNFGTANTKQAYVQCN
EDNTDRDIQTEEIEVCEKWTQHPPEHNGACGGKKTPSAFCDQXCLYADFNNDVSHDFTDP
NLSYEARDKTVSEMNFDSQRLIAFLHSASQVMVVLLEEDEAERKSLRKPRTQTDTLSFSD
GSLQLNTKLPFLYGRQISLVHFSQVQGHTMMSVHKPTIKPSAVRLDSCTLICIWNIWEPS
RPQKILVYESEVQCCCFSPGKAILVFAGTSVGSVVLWDLREHARNHYRLKIGDEEWTFRQ
PTFSTDAVMAGSGHFSSVTSVEVVPSAIAGRLRPEVLLLASEEESSGLSFQLASLDESGV
LNFWVVVELPKTNEAGSQTDLGLRPGGKVKLLHSSSLLTAERVSPRDAVKTGPLQTLHLK
FLPTDSNHFFIGTNMGVVNHGTSHGLKAPPKFYSFQEVGARPADVSSIHFSPFSQNFFLV
GCGDGSIRLHAVSREQPVAEWKNGTAGEPVVSLQWAQTRPTVFCVLDATSNLYIWDLLKN
DTEPVVTERMITDR
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggatagtgataaaaaaataacaaaggaagacacatggaaaccagctgacctgagaaga
catcttagggaggaaggacatggtgatgactatgccaggaggcgagatgagactgggaga
aagcaccggggtggagaatccacagagagacaccgtagggacccggagagggagtccaga
agggagagggacgagcatggggaaagggagagtacaagagatagacgaggtgaagaggaa
aaagacagatatgtagaccgcaggaaagagggctcacgtgacaggagaggtgataaggaa
agggatagaagagaggatagagaaaaaagaagggaaagagagagattggaagatgcagac
aagtaccgtaatgactccagagagaacagagacaggcggcgggataaagaggaaaagctt
gagagggaaagagataaggaaagggacagggataaagagaagaatagggataggaatgga
cagagacacagcgaggagtacaggaataaaaggagagaaaatggagacaaggaaagaagg
agagaagaacgggacagagaacacaggactgagagggagagaaggagacatgaagagagt
ggagaaggtgaaagacatcgggtagaaaagcacgacagagagcacagagatcaacatcgg
gaaagagacagatataaagatgaatatgaagtgacgaggaatgacaaagaaagacgagag
agacatgaagaaagaaagcattcagagctgaaggaggaaagagcatccaaagaagagcat
agaaaacataaagaggatagagaaaggagacacagagagagaggatatcatgatgaaaaa
cggaagcatgacagtgactccagggggcatcaagccttgaaggggttagatgaagaggtc
aggcatcgagagagaaggcacagacaggatgaagacccagagagaaagcacagagacagg
accagctccaacaaatcatcctctgacaaaagtcatgaaacaaagacgatgaaaacacat
gaggtagacatgctatctgagcactggacagctagtgcgatagatgtaggagacacagaa
gagcccgttgtcaatgatgaaaatttggcagaccaggaatatgaagatgactttgaggat
tatgaggacgattttgaggagatggatgagagtacaaatgaaggtgaggagcaggaggag
ccagatcatccaggggtgggagaagagattgaggaacttacaccgcaaaggaaagaggag
atcaaagcaattcggagagccatggatgaagagaatgaacgaattggaacagctcagtcc
agagaaagtatgagcagagaggaggaagacagggcaaaatggtccagaggcgctgaaaag
aaccagagaagaagttccccgcgtgggaagtttattgactttgtggcagcaaaacagcgt
gaagtcagcaagaaagttgcctcaaaacaaaagaaacgcagcatagagctactccgctta
attgatctggatttctcaatgacagtctcccttttggatctcccacctgttaatgaatat
gacatgtatattagaaactttggcactgcaaacaccaaacaggcttatgttcagtgtaat
gaagataatacagaccgagacatccagacagaggagatagaagtgtgtgagaagtggacg
cagcatcctcctgagcacaatggagcctgtggcggtaagaaaacaccaagtgcattctgt
gaccaatagtgtctgtatgcagatttcaacaatgacgtatcccatgattttacagatcca
aacctgtcttatgaagcacgggacaaaaccgtcagtgaaatgaattttgattcacagcgc
ctgatcgcatttcttcactcagcctcacaggtcatggttgtacttttggaagaggatgaa
gctgagaggaaatccctgaggaagccgaggactcaaacggacacactgtctttcagtgat
ggaagcctacagctgaacactaagttgccttttctttatggtcgccaaatcagcctggtg
cacttctctcaggtccagggacacaccatgatgtcagtccacaagcctacaattaaaccc
agcgctgttcgtctcgacagttgtaccctcatctgcatctggaacatttgggagccgtcc
agacctcagaagatccttgtttatgaatctgaggtgcagtgttgctgtttcagccctgga
aaggccatattggtgtttgcaggcacttcagttggctctgtggtgctgtgggacctgagg
gagcatgctcgtaatcactaccgcctgaagataggggatgaggagtggaccttcagacag
cctacattctccactgatgcagtgatggccggctctggccatttctcatctgtgacgtct
gtcgaagttgtaccctccgcaatagcaggaaggctgaggccagaggtcctacttctggca
tctgaggaagagtcctcaggattgtcatttcagctggcttctctggatgaaagcggggtt
ttaaatttctgggtggtggtggagctcccaaaaaccaacgaagcaggttctcaaacagat
ctggggctcagacccggtggcaaagtaaagttgcttcacagctcctccctcctcactgct
gagagggtctccccacgagatgcagtgaaaacagggccattacagacacttcatttaaaa
ttcctcccaactgactccaatcatttctttattggcactaatatgggtgtggtcaatcat
ggaaccagtcacggtttgaaggctcctccgaagttctacagctttcaggaggttggagcc
cgacctgctgatgtcagctcaattcatttctctcccttcagccaaaactttttcttggtg
ggttgtggagatggcagcatcaggctacatgcggtcagccgcgagcagcctgtggccgag
tggaagaacggcaccgctggtgaaccggtggtctcactgcagtgggcccaaaccaggccg
acagtcttctgtgtgctggatgcgacttctaacctctacatatgggacctgctgaaaaat
gacaccgagcctgtggtcactgaaaggatgataaccgacaggtga
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integrated database retrieval system
