Scomber japonicus (chub mackerel): 128382472
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Entry
128382472 CDS
T09718
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
128382472 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128382472 (spata13)
Membrane trafficking [BR:
sjo04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
128382472 (spata13)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
SH3_9
PH
DUF1604
Motif
Other DBs
NCBI-GeneID:
128382472
NCBI-ProteinID:
XP_053198438
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All DBs
Position
21:complement(12782321..12797000)
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AA seq
1294 aa
AA seq
DB search
MSRAEQKDRVLSTSEDSLPCHHNSKADPVIRSRPLSDLFPFQSHAERSAVPYLLSGCSAQ
VQPMTPGSLADENRLNGINSSAWSNPVIAQAEGKPHSSRIMRLFSSSKKGAVPAQSPSTD
SPTLTHSNDSSSGPQSWSGLQGLGVMDSFKKLRSSVLQGIQSKGATNHDGEHGPTFNQEM
SNGTVVNNIDPQLDDPTNHLKIAEGVSVSNGNITGQKMAGMSQCGSDIEDYDDEENDDGD
GLQRNSRFSRSIRRAYGAGRISLLDMGNGRLAGRSTNETTDTQKADQNSKVNAQTEYTSE
NTNVKVLSRLSKSAENLHIFKAPFRRKAPSPGPPSQQAHPQRMSTSNGTTNIQRTASASS
VDLRGHADSRRKSPVKAKGQMLKLVGSMTDLTVRHRRSPSPSPTSPPSMSPLTRLHDDYS
RRVPCLTASERQRRPSPVRARVMSVEHNPLIHPEPEHDVSSQQHQVLVPVSLEPPERTEE
TFPNTGVLAHSESFTVAIRSGNKQTENTECSSSTLSQEELSQSQEQARFNSLSVKATSDH
QGQETLLQTEEVSPTTSSSTPPISPTCLSDSPTSPTSPTSPTDAAAASTETSSVKPRRRS
GRPRPRPISDYAQLISRKHSIPEEVAERHAGERTENASPHKDSSSNDKCGNGESPESCTM
NGNIQGRRQRPISVMGVEDMFSADVEEKDSLPSSLSRPPIPSHQVPPYRGVSARFRPSTL
SQSTPIGLDRVGRRKLHRVLSDGVSQCSATLDDSVSEEEEGSFDELTDVTPHLQPGVELA
VLNECISSGQTVYAEALWDHVTMEEQELAFKAGDVIRVVEAPDKDWWWGRGADKEGWFPS
SFVRVRVNQEDSSAESVESVADQEDPTPRDTHSAQHKEQMRTNVVQEIMSTERIYIKHLR
DICEGYIRQCNKHPDMFNELQLKTIFSNIEDIYKFQRQFLRDLEKKYNKEQPHLSEIGSC
FLLQGEGFSIYSDYCNTHPAACAELQRLMKSGRYKHFFEACRLLQQMIDISIAGFLLTPV
QKICKYPLQLGELLKYTPKDHSDYCGVSKAYEAMKNVASLINERKRRLETIDTIAHWQVA
ILHWEGPDVLERSSELIHSGELTRVVRQGKMQQRSFFLFDHQLVFCKKDVLRRDLLHYRG
RLDMDQTEVLDMPDGRDSDLGLTLKNALRLRHASTLELMCVLCCRKAEDKQRWLQAFAKE
RHRIKEDQEMGMEISEEQRKQAIVNARRAKHGKIKSIGYGGPIPPHQNLHPLHQRHITIP
TSVPQQQVFSLAEPPKRKPYHLLYNITRSAFFKK
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaaaaggacagagtcttgtccacaagcgaagactctctcccgtgc
caccacaactctaaagctgacccagtgattcggagtaggcctctcagtgatttattccct
ttccagagtcatgctgagagaagtgcagtcccatatctgctgtctgggtgcagcgcccaa
gtacaaccaatgactccaggctctcttgccgatgagaaccgattgaatggtatcaactcc
tctgcctggtccaaccctgttatagctcaagctgaaggaaagccccactcctcaagaata
atgcgtcttttttctagctcaaaaaagggagctgtccctgctcagagtccaagcactgat
agtcccactttaacccacagcaacgacagcagcagcggcccccagtcttggtctggactc
caaggactgggcgtcatggactccttcaaaaagctgcgctcctctgtgctccagggcatc
cagagtaaaggggcaaccaaccatgatggagagcatgggcctacattcaatcaggaaatg
tctaatggcacagttgtcaacaacattgaccctcagctagatgatccaacgaatcattta
aagattgcagaaggtgtctctgtgtctaatggaaatattactggccaaaagatggctgga
atgagtcagtgcggctcagacattgaggactacgacgatgaggaaaatgatgatggagat
ggcctccaaaggaattcgcgcttctcaaggagtatcaggagagcatatggggcaggacgc
atctctttacttgacatggggaatgggagactagcagggagaagcacaaatgaaactaca
gacactcaaaaagcagatcaaaactctaaggtcaatgcccaaacagagtacacgagtgag
aacacaaatgtgaaggtgctgagcagactgagcaaaagtgcagagaaccttcatatattt
aaggcacctttcagacgcaaagctccatctccaggccctccttcacaacaggcacacccc
cagaggatgagcacatcaaatgggacgacaaacatccagaggacagccagtgcctcctca
gtggacctccgaggccacgctgatagccgcagaaagagccctgtgaaggccaaggggcag
atgctgaagctagtaggcagcatgactgatctaactgtccgtcacagacgaagtccctcc
cccagccctacttctccaccttccatgtcacccctgacccgtctccatgatgactattcc
cgccgtgtgccttgtctaacagccagtgagcgacagcgccggccctcgcccgtcagagct
cgggttatgtctgttgaacacaacccactgattcacccagagccggaacatgacgtcagt
tcacagcagcaccaggtcctggtcccagtttctttggagcccccagagagaacagaagag
acttttcctaacactggtgtcttagctcattcagaatctttcactgttgcaataagaagt
ggtaataaacagacagagaatacagaatgcagttcatctacactcagccaagaagagctg
tcacaaagccaagaacaggcgaggttcaactcactatcagttaaggcgacatcagatcac
caaggacaagaaacacttctccaaacagaggaagtctcaccaacaaccagcagcagcacc
cctcccatctccccaacatgtctctccgactcacccacatcacccacatcgcccacatcg
cccacagatgcagctgcggcttccacagaaacatcctccgtcaagcccagacgaagaagt
gggcgcccaagacctcggccaatctcggattatgcacagctcatttccaggaagcactcc
attccagaggaagtggcagaacggcatgccggggaaaggacagaaaatgcatcaccgcat
aaagacagcagtagtaatgacaagtgcgggaatggggaaagtcctgagagctgtaccatg
aacggcaacattcagggcaggaggcagcggcccatctcagtgatgggagttgaggatatg
ttttctgctgatgtggaggagaaggacagccttccttcttccctgtcacggccacccatc
ccctcccaccaggtgcccccctatcgaggagtgtctgccaggttccggccctccaccctc
tcccagagcacccccatcggactggaccgcgttggacggcgcaaacttcacagagtgctc
agcgatggtgtgtctcagtgctcagcaacacttgatgacagcgtgagtgaggaggaggag
ggcagctttgatgagctgactgatgtcacaccccacctccagccaggggtggagctcgct
gtgctcaatgagtgcataagctctggccagacggtgtatgctgaggctctctgggaccat
gtgaccatggaggagcaggagctggccttcaaggctggagatgttatccgtgtagtggaa
gccccagacaaggattggtggtggggcaggggggctgacaaggagggctggttcccctcc
agttttgtgcgggtgcgcgtgaaccaggaggactcgagtgcagaaagtgtggagagtgta
gcagaccaggaagatccaactcccagggacacacacagtgcccagcacaaggagcagatg
aggaccaatgtggttcaggaaatcatgagcactgaacgtatctacatcaagcacctgcgg
gacatctgtgagggttacatccgtcagtgcaataaacacccggacatgttcaatgagctg
cagttgaagaccatattcagcaacatagaggacatctacaagtttcagaggcagttcctt
cgagacctggagaagaagtacaacaaagagcaacctcatctcagtgaaataggatcttgc
tttctcctgcagggggagggcttttctatctactcagactactgtaacactcacccagct
gcctgtgcagagctgcagcgcctcatgaagtcggggcgatataagcatttctttgaggcc
tgtcgactccttcagcagatgattgacatttccatagctggtttcttgctcacacccgtc
cagaagatttgtaaataccccctgcagctgggagaactgctcaagtacacccccaaagac
cacagtgactactgtggagtgagcaaagcatatgaagcaatgaagaatgtggccagtctg
atcaatgagaggaagagaaggctggagactattgacaccatcgctcactggcaggttgcc
attctacactgggagggacctgatgtgctagagcgcagctcagagctgatccactctggt
gagcttactcgagtagtccggcaaggtaaaatgcagcagcgcagcttcttcctttttgac
caccagctggtcttctgcaaaaaagatgtcctgcgtagagacctgctccactatcgtgga
cgactggatatggaccagaccgaggtgctggacatgcctgacgggcgggactcagacctg
ggtctgaccctaaagaatgcgctgcgcctgcgccacgcctccactctggagttaatgtgt
gtgctgtgctgcaggaaggctgaggacaagcagaggtggttacaggcctttgccaaggag
agacacagaatcaaggaggaccaagagatgggaatggagatcagtgaagagcaaagaaaa
caggccattgtcaatgccagaagagccaaacacgggaagatcaaatccataggttacggc
ggtcccatcccaccacaccaaaaccttcacccacttcaccagcgtcacatcaccattcca
accagtgtgcctcaacagcaggtcttttcactggcagagcccccaaaacgaaagccttat
cacctgttgtacaacatcacccgcagcgcctttttcaagaaatga
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