KEGG   Scomber japonicus (chub mackerel): 128382491
Entry
128382491         CDS       T09718                                 
Symbol
myripb
Name
(RefSeq) rab effector MyRIP isoform X1
  KO
K22237  Rab effector MyRIP
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sjo04131]
    128382491 (myripb)
Membrane trafficking [BR:sjo04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    128382491 (myripb)
SSDB
Motif
Pfam: Rab_eff_C FYVE_2 DUF155
Other DBs
NCBI-GeneID: 128382491
NCBI-ProteinID: XP_053198456
LinkDB
Position
21:14937446..15032177
AA seq 1047 aa
MGRKLDLSGLTDDEAEHVLKVVQRDMKLRKKEEERLSEMKQELAEEGSRCSILSKQHRFN
EHCCIRCCAPFTFLLNPKRQCLDCQYNVCKTCCTYNKRDKAWLCSACQKGRVLRTQSLEW
YYNNVKSRFKRFGSAKVLKTLYRKHIIERGALSDLPESSVHEGSTGNDNDGSICGSDSAF
YKQSEGHSMAETLTVALRVAEEAIEEAIAKAEEFSDSLEKQNEARYLRDHKEELIEELAT
TIVQKIIQRRKRSEMQTEYDFVWPQPQSLIQSSELPSPSQPQSSSQGPQDPHKTSYSLWR
SRSAFSLTSDDSPEKGPEDEGAGAGGGLHEYASLKREGKATSLPSWKSVDRLDNSSASSV
LQSPDGNWIALHSSQLSRPSLLTKRKSLVFSVLEKESGVVSAYDEMGSNSEEDDEGGWGA
ALRQFRRKLSDETYYTDSQHDPEWTYTQHLPVTSPSSGQYTNTETLNSDSEASSVLSACP
RKPPHNLLRKKGPPDTHLHPHHQPPYHQHQNFSPYPHLSETLDVNFNPKVMGDSSEAEER
QNDPVRRSRRRRKSKRESSSEQSRPAGPQNPPQSLYPLVQENSGFLLNALLKRGLSEEHP
VPDTLPMAPAALDTFKVEAMTPEPEDLETVAPNSAAPSPPQPYPLAPGPQHSLSSSGPGS
GSGDPLEEELRCRLRELVSRANSKDSSSSEEDCAKWPADKQMDKECDGQREKTKLKDAER
QRESDRLRGSSKEREKGSETGEQVNGQEMSRRERLIKSPSMKIGEEGRVRERRLQKVDSL
KEKVDDQEQKRGDRREGNRQSKRQHKRDMEKEAGQKGGGWRSGSSASTPAVTPSSQEGVL
SDNQEQQNDLEQQQRLQLLSSLLQQQKYSAASLCSITTEVLKVLNATEELIGEAGGDSYT
PSESISVSPISSSSETRRLDQRLTKMEENVYLAAGAVYGLEGALGDLEQCARSISSDTTD
TELAFLEDQVATAAAQVQQSELQISNIEARISALKTAGLNVTVCNHFCKSKPKPQTLDSS
RHQRRKLPAPPLKDKLEAEQQVKVFRP
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgggccggaagctggacctgtctggcctgacagatgatgaggccgagcacgtcttgaaa
gtggtccagcgggacatgaagctgagaaagaaggaggaggagaggctgagtgagatgaag
caggagctggcggaggaaggcagcagatgctccatcctctccaagcaacaccgcttcaac
gaacactgctgcatccgctgctgcgcgcccttcaccttcctgctcaaccccaagcgccag
tgcctggactgccagtacaacgtctgcaagacctgctgcacctacaacaagagggacaaa
gcctggctgtgctccgcatgccagaagggcagggttttgaggacacagtcccttgaatgg
tattataacaatgtgaagagtcgcttcaagaggttcggcagtgccaaggttttgaagaca
ttgtacaggaagcacattattgagagaggagcgctctctgatctcccagaaagcagtgtt
cacgagggaagcactggcaacgacaatgatggcagcatctgtggcagcgactctgccttc
tacaaacagagtgaaggacacagtatggcagagacgctcacagtcgccctgcgtgttgct
gaggaggctatagaggaagccatcgctaaggcagaggagttcagtgacagcttggagaag
cagaatgaggctcggtatctgagggaccacaaagaggagctcatagaggaacttgcaaca
accattgtacaaaaaatcatccagaggaggaagcgttcagagatgcagacagagtatgac
tttgtctggcctcagcctcagtccttgatccagtccagtgagctgccctccccttcacag
cctcaatcttcttcacaaggaccacaggatcctcacaagacctcctactccctctggcgg
tcacgctcagctttctccctcaccagtgacgactccccagagaaaggtccagaggacgag
ggtgccggggccggcggtggcttgcacgagtacgcctctctgaagagggagggcaaggcc
acatctctacccagctggaagagtgtggatcgcctggacaactctagtgcatcctcagtt
ctccagagtccagacggtaactggattgctctgcacagctctcagctgtctcggcccagt
ctgctaactaagaggaaaagcctggtgttcagtgtgttggaaaaggaatccggcgttgtc
tcagcttacgacgagatgggatccaattctgaagaggacgatgagggtggctggggagca
gcattgagacagttcagacgcaaactgtctgacgagacttactacacagactcacagcac
gacccagagtggacatacacccagcacctccccgtcacctcaccatcctctggtcagtac
accaacacagagactctcaactcggactctgaggcctcatccgtgctgtctgcatgtcct
cgcaaaccgcctcacaacctgctgagaaagaaaggacctccagacacacacctgcaccct
caccaccaaccgccctaccaccaacaccagaacttctctccatacccacacctttccgag
acactggatgtgaactttaacccgaaggtaatgggagacagcagcgaggcagaggagagg
cagaatgaccccgtcagaagatcgcggcgacgcagaaaaagcaagagagagtcgtcatca
gaacagagcagacctgcaggcccccaaaaccccccacagtccctctaccccttggtgcag
gagaacagtggttttctactcaacgccctgctgaagaggggtttaagtgaggaacatcca
gtacctgacactttgccaatggccccagctgcactagacaccttcaaagtagaagccatg
acacctgagccagaagatttggaaacagtggccccgaattcagctgctcctagccctcct
cagccctaccctctagctcctggaccccagcactctctcagcagctcggggcctggatct
ggctctggagaccctctggaggaggaactgcgatgcagactcagagagctggtcagccgc
gccaacagcaaagacagcagctcatctgaagaagactgtgcaaagtggcctgcagataaa
cagatggataaagaatgtgacggacaaagagaaaagacaaagttgaaagatgcagaaagg
cagagggaaagtgatagattaagaggcagcagtaaggaaagagagaaaggaagtgaaaca
ggggaacaagtgaatggacaagagatgtcaagacgtgagaggctaataaagagtccatcg
atgaagatcggtgaagaaggaagagttagggagaggaggttacagaaagtagatagtttg
aaagagaaagtagatgaccaggagcaaaagagaggagacagaagagaggggaatagacaa
agtaagaggcaacataaaagagatatggagaaggaagcaggacagaaagggggtggatgg
aggagcggatccagtgcaagcacgcctgctgttacaccatcttcccaggagggagtgctg
tctgacaaccaggagcaacagaatgacttggagcaacaacagaggcttcagttgctctcc
tctctcttacagcagcagaagtactcggctgcctctctgtgcagcatcaccaccgaggtg
ctgaaggttttgaatgccacagaggagctgattggtgaggcgggaggtgatagctacacc
ccgtctgagtccatcagtgtttcccccatctccagcagctctgagacccgcaggctggac
caaaggcttactaagatggaggagaatgtgtacctggctgctggtgctgtgtatggcctt
gagggggcactgggggatttggagcagtgtgcccgcagtattagcagtgataccacagac
acagagctcgctttcctggaagaccaggtggccactgcagctgctcaggtccagcagtct
gaactacagatatcaaacattgaggccaggatatcagctctgaaaacagctgggttgaat
gtgactgtctgcaatcacttctgcaagtccaagccaaagcctcaaaccctggactcatca
cgccatcagaggaggaagctgccagcccctccactgaaagataagttggaggcagagcag
caggtgaaagtgtttcggccgtag

DBGET integrated database retrieval system