Scomber japonicus (chub mackerel): 128382647
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Entry
128382647 CDS
T09718
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb isoform X1
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sjo01001
]
128382647 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sjo03041
]
128382647 (prpf4bb)
Enzymes [BR:
sjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
128382647 (prpf4bb)
Protein kinases [BR:
sjo01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
128382647 (prpf4bb)
Spliceosome [BR:
sjo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
128382647 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
128382647
NCBI-ProteinID:
XP_053198617
LinkDB
All DBs
Position
21:complement(6131037..6142566)
Genome browser
AA seq
1021 aa
AA seq
DB search
MADVEMDIASRRMNNGNEHVKQDLESHERSGNEDSGEMSEEEEEEEEVGEAETNGEKTQE
GSKHHSSSSGGKHKRKKHKHRSKHKKHKHGSEEDKDRKRKHRHKHRKHKRKEGSSPSAAV
IFGSSGHKKVESSPSSGNPSLDDRALLEDLEKQRAMIKAELDSQLMEGKVQSGMGLILQG
YNSGSEEDGESRVRNGEQRQRVSSGKPISPRGGKGGKSRRDSTEGSKTSSKRRSRSKSAE
RPAKESKQDKVAKSMKDTGVKERGRGRSRSKDRKRSDSADRSKERARKSNSPSSWRGDQK
GSRTEKRSSPQRDERPNQERAGRRSRSPGRERPTRLDADRDKRPTKSPSKDASSGKENRS
PHRRGLHSPVRKRSPSPRHRDAHHPPAGASDRASKQSHSPSRTRSPPRRGRSRSPDVRRR
DVDRQDSPMRKRPRPDIGSARDRSRENSPRMAARRRMSRSPLRRRSPSLRRRSRSSPRRR
SRSPLGHRSGERDRYGRLRQYRRSMSRDRDRRRRRSRDEDKFKGSLSEGMKVDQESSEGE
VLEDFDGEEVDEEALIEQRRQQRLAIVQKYKLVNDDNMVSEPSSPQSSTRSRSLSPDDIL
ERVAADVKEYERENLNTFEASIKAKHNLITQEKDGANPKKPSAPDMFTESDDMFAADFDS
ARMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNVIRARD
TARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLV
FEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNES
KTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLHELYTGK
ILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVM
STINPTKDLLTDMIGCQRLPEDQRKKVMQLKDLIDGTLMLDPAKRISINQALQHPFIQEK
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatggatatcgcgtccagaagaatgaataatggcaacgaacacgtg
aagcaggatctggagagccatgagaggagcggcaatgaagacagcggagagatgtctgaa
gaagaagaggaggaggaagaggtaggggaggcggaaactaacggtgagaagacacaagag
gggtccaaacatcacagcagcagcagcggcgggaaacacaagaggaaaaaacataagcat
cgcagtaagcacaaaaaacacaagcatggctccgaggaggacaaggaccgtaaacgcaag
caccgtcacaaacatagaaaacacaaacgcaaagagggctcctctccctccgctgctgtc
atcttcggctcctccggccacaaaaaagtcgagtcctctccgtcctccggaaatccgagt
ctggacgacagggccttgctggaggatttggagaaacagagggccatgattaaagctgag
ctggacagccagttgatggagggcaaggttcagtcgggtatgggtttgatccttcagggt
tacaactctggatcggaagaagacggagagtcgagggtgaggaatggagaacaacgtcaa
agggtcagctcaggtaaacccatatctccgaggggggggaaaggtggtaaatctagacgg
gactcaacagagggcagtaaaaccagctccaagcgtcgcagtcggagcaagtccgcagaa
aggcctgccaaagagtctaagcaggacaaggtggcaaaaagtatgaaggacacaggtgtt
aaagaaagagggcgcggcaggagcaggtcgaaagacaggaagcgctccgacagcgctgac
aggtccaaagagagagccaggaagtctaactccccctccagctggagaggagaccagaaa
ggtagccgcactgagaaacgttcctcacctcagcgggacgagcgaccaaaccaggagaga
gcgggccggaggtccaggtcgcccggacgagagcggccgactcgcttggacgccgaccgc
gacaaacggccgaccaagtccccgtcgaaggacgcgtcgtcagggaaagagaaccgctcc
ccacacagacgagggcttcacagccccgtgaggaaacgcagcccctcccctcgccacaga
gacgcccaccaccccccggccggcgcctcagacagggcgtccaaacagagtcattctccc
tccagaacaaggtctcccccgaggagaggccgcagccgctcgccagacgtcaggaggagg
gacgttgacaggcaagactcaccaatgaggaagcgcccgcggccagatatcgggtcagcc
agagatcgatcacgagagaacagtcccagaatggccgctcgccgcagaatgagtcgctca
cctctaagacggcggtctccgtctctacgacgacgctctcgctcctctccccgcaggcgg
agcaggtctcctctgggacacaggtctggtgagagagaccggtacggcagactcaggcag
tacagacgctcgatgtcccgcgacagagacaggagaagacgacgcagccgagatgaagac
aagttcaaaggcagcctatcagagggcatgaaggtcgaccaagaatcctcagaaggagaa
gtgttggaggactttgatggggaggaagtagatgaagaagccctcattgaacagcgcagg
cagcaacgcttggctattgtacagaaatacaagctggtgaacgatgacaacatggtgtcg
gagcccagcagcccgcagagcagcacccgcagccgctcgctctcgccagacgacatcctg
gagcgagtggcggcggacgtcaaggagtacgaacgcgagaacctcaacaccttcgaggcc
agcatcaaagccaagcacaacctcatcacccaggagaaagacggagccaacccaaagaag
ccctcagcccctgacatgtttacagagtcggatgatatgtttgctgctgactttgatagt
gccaggatgagagcagcaggtgtaggaaaggacttcaaagaaaaccccaacctcagggac
aactggactgatgctgagggttactaccgggtgaatatcggcgagacactggacaaacgt
tacgacgtgtacggctacactggccagggtgtgttcagtaatgtcatcagagccagagac
actgccagagccggccaggaggtggcagtcaagatcatccgaaacaacgagctcatgcag
aagaccggtttgaaagagttagagttcctcaagaagctgaacgacgccgatcccgatgac
aagtttcactgcctacgcctcttcaggcacttctaccacaagcagcatctgtgtctggta
ttcgagcctctcagtatgaatttgagagaggtgctgaagaaatacggtaaagacgtcggc
ctccacatcaaagcggtgcgctcttacagtcagcagctcttcttggccctaaagctgctc
aaacgatgcaacatcctccatgcagacatcaagccagacaacatcctggtgaacgagtca
aagaccattttgaagctatgcgactttggctctgcgtcgcacgttgccgataacgacatc
accccatacctggtcagcagattctacagagctccggaaatcatcataggaaaaccatac
gactacgggattgacatgtggtccgtcggctgcacgttacacgagctgtacaccggcaaa
atcctgtttcccggatcttccaacaaccacatgatcaaactggcgatggacctcaagggc
aagatgccgaacaagatgatccgcaaaggcttgttcaaagaccagcacttcgatcagaat
ttgaacttcctgtacattgaagtagacaaagtaacagaaagggagaaggtgacggtgatg
agcaccatcaaccccaccaaagacctgctgacagacatgataggatgccagcgactgccc
gaggaccagaggaagaaggtgatgcagctgaaggacctgatcgatggcaccctgatgttg
gacccagccaaacgcatcagcatcaaccaggctctgcagcacccctttatccaggagaag
atctga
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integrated database retrieval system
