Scomber japonicus (chub mackerel): 128382663
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Entry
128382663 CDS
T09718
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128382663 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128382663 (stau2)
Protein phosphatases and associated proteins [BR:
sjo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128382663 (stau2)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
128382663 (stau2)
mRNA cycle factors
Stress granule specific factors
128382663 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
128382663
NCBI-ProteinID:
XP_053198637
LinkDB
All DBs
Position
21:complement(13887530..13972358)
Genome browser
AA seq
668 aa
AA seq
DB search
MAQVKVQTSAPLAGPGLSPGVSPTAMASPGSLGLQPSVNGTGPAPTPACPAPAVGYGDAP
VSASPPGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLTLGE
QVWEAEGTSIKKAQHSTAAKALDESVLPRPAPRSPKVDINSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGSHEFIGEGRTRQAAR
HNAALKALQALRNEPIPERPPQSPEEKEEPEEGTDASKSEISLVYEIALKRNLSVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFIPTVEKPKTHY
KKRTKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQVKVNN
EVATGTGPNKKVAKRNAAEAMLLQLGYKASTVPQNPTEMDNKGWNGQKASFTEATNNTQK
GLLHLSPDVYQEMEASRKQGGSAPGPGGNSGSVNYMTSKDMGPCSAPLPPGHPPYYSGSA
SSPSPTATMARELLLNGQSPTAEASLPMKGKNSALACGVSVQPAQQLDYLARIQGFQVQY
SDAQSGKDFVTYLTLSPVQMTFHGTGSTLQASHDQAALSALKQLSEQGLDPVDGPIKSTE
ACGREDGH
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtacagacctcagcacccctggctggtcctggcctctcccccgga
gtctccccgacggccatggccagcccaggatcactgggtctgcagccctccgtcaacggc
acaggcccggcccccacacccgcctgccctgctcctgcagtcggatatggggacgcccct
gtgtctgcttcaccgccaggcccgccccaggagaacatggcaaaccctaaagagaaaact
ccaatgtgtttggtgaatgagttagcccgtttcaataggatccaaccacagtataagctc
ctcaatgagcgaggccctgcacatgctaagatcttcacagtgcagctgactcttggggag
caggtgtgggaggcagagggaaccagcattaaaaaggcccagcactccacagccgccaaa
gcgctggatgagagtgtccttcccaggccagcaccccgctcccccaaagttgacatcaac
agcaacccaggcagtataacacccacagtggagctgaatggtctggccatgaagagaggg
gagccagccatctacaggcctttggatcccaaacccatgcccaactacagagctaactat
aacttcagagggatgttcaaccaaaggtaccattatcctgttcctaagatcttctatgtg
cagctgtctgtggggagtcatgagtttattggcgaggggcgcacccgccaagcagccaga
cacaacgctgctttgaaggccctgcaagcccttcgcaatgaaccaattcccgaacggcca
ccacagagtccagaggaaaaagaggagcctgaggaaggcactgatgccagcaaatcagag
atcagcctggtctatgaaattgccctcaagaggaacttgtctgttaactttgaggtgttg
aaagaaagcggccccccacacatgaaaagcttcctgactcgcgtcacggtaggcgagttc
tctgctgagggcgagggcaacagcaagaagctgtccaagaagcgtgctgctctctccatc
ctgcaggacctgaagaagctgccctttatccccactgtggagaaacccaagacacactac
aaaaaacgtaccaagaccatcctcaagacgggaccagactatggccagggcatgaaccct
atcagccgtctggcccagatccagcaggccaagaaggagaaggaaccagagtacttgttg
ctttcagagagggggatgccccgacgccgggagttcatcatgcaggtgaaggtgaataat
gaggttgccacgggaacaggccccaacaagaaggtggcgaagcggaacgcagctgaggcg
atgctgctgcagctgggatacaaggcctccacagtccctcagaatcccaccgagatggac
aacaaaggctggaacggacaaaaggcgtcttttactgaagcgacaaataacacccagaag
ggcctgctccacctcagccccgacgtctaccaggagatggaggccagcaggaagcagggg
ggcagcgctccgggccccggcggcaacagcggctctgtcaactacatgacatccaaagac
atggggccctgttctgccccactgcccccaggacaccctccatattacagtggctcagcc
tcctcacccagtccaaccgccaccatggccagggagctgctgctgaacggacagtcaccc
acagccgaagcctccctgcctatgaaggggaagaactctgccctcgcctgcggcgtctca
gtgcaacccgcacagcagctggactacttggctcgcatccagggcttccaggtgcagtac
agtgatgcacagagtggtaaggattttgtgacctatctgaccctctcccctgtgcaaatg
actttccacggcaccgggagcaccctccaagccagccatgaccaggctgctctaagtgcc
ttgaaacagctgtcggagcagggactggacccggtggatggccccatcaagagcaccgaa
gcatgtgggagggaggatggacattaa
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integrated database retrieval system
