Scomber japonicus (chub mackerel): 128382686
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Entry
128382686 CDS
T09718
Symbol
ctdspla
Name
(RefSeq) CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like a isoform X1
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sjo01009
]
128382686 (ctdspla)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjo03021
]
128382686 (ctdspla)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
128382686 (ctdspla)
Protein phosphatases and associated proteins [BR:
sjo01009
]
HAD phosphatases
Fcp/Scp phosphatases
128382686 (ctdspla)
Transcription machinery [BR:
sjo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
128382686 (ctdspla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
Motif
Other DBs
NCBI-GeneID:
128382686
NCBI-ProteinID:
XP_053198660
LinkDB
All DBs
Position
21:complement(12093323..12125350)
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AA seq
279 aa
AA seq
DB search
MDNTSIITQVANPKEEESISSNQDKVSQSNSSLKKHRSRSIFSPFFCCFRNYNDYHVEPP
PANNKTLSLPPPPEENGSPPKCDQVQVIPIPSPPAKFLLPEVSIADYGKNCVVIDLDETL
VHSSFKPISNADFIVPVEIDGTVHQVYVLKRPYVDEFLQKMGELFECVLFTASLAKYADP
VADLLDQWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIIDNSPASYIFHPENAVP
VQSWFDDMTDTELLDLIPLFEGLSKEEDVYSLLQSLRNR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggacaacacgtccataataacacaggttgcaaatccgaaagaggaggagagcatttct
tcaaaccaagataaagtctcccagtccaacagcagcctaaagaagcaccggagccggagc
attttcagtcccttcttctgctgcttccgcaactacaatgactaccacgtggagccacca
cctgccaacaacaagacactttctctgcccccgccaccagaggagaatggcagtcctcct
aagtgtgaccaggtccaggtcatccccatccccagtcctccagccaagttcctcctgcca
gaggtcagtatagcagactatggcaagaactgtgtggtgatcgacctggacgaaaccctc
gtacacagctccttcaagcccattagcaatgcagacttcatcgttccagtggagattgat
gggactgttcatcaggtgtatgtgctgaagaggccctatgtggatgagttcctccagaag
atgggggagctctttgagtgtgtcctcttcacagcaagcttagccaagtatgctgaccct
gtggcagatctgctggaccagtggggggtgtttcgtgcccggctcttcagggaatcctgt
gttttccacagaggaaactacgtcaaagacctcagtcggctgggccgagagctcagcaaa
gtcatcatcatagacaactcacctgcctcctacatcttccacccggagaatgcagtcccc
gtgcagtcctggtttgacgacatgacagacacagagctacttgacctgattcctctgttt
gagggcctcagtaaggaggaggacgtttacagcctgttacagagcctgaggaacaggtag
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