Scomber japonicus (chub mackerel): 128382695
Help
Entry
128382695 CDS
T09718
Symbol
scrib
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
128382695 (scrib)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_8
PDZ_6
LRR_14
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
128382695
NCBI-ProteinID:
XP_053198676
LinkDB
All DBs
Position
21:5755257..5849505
Genome browser
AA seq
1770 aa
AA seq
DB search
MLKCIPLWRCNRHVESVDKRHCNLQTVPDEIFRYSRSLEELLLDANQLKELPKPFFRLLN
LRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCRALEIADFSGNPLSRL
PDGFTQLRALAHLALNDVSLQILPNDIGNLANLVTLELRENLLKSLPTSLSFLVKLEQLD
LGSNELEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRRLVCLDVSENRLEELPSELN
GLLALTDLLLTQNLLEVVPDSIGCLKQLSILKVDQNRLTHLTDSIGECENLTELILTENL
LQSLPRSLGKLKKLTNLNVDRNRLGSVPKELGGCASLNVLSLRDNRLGKLPPELADATEL
HVLDVAGNRLQNLPFALTNLNLKAMWLAENQSQPMLKFQTEDDERTGEKVLTCYLLPQQP
SPSLENLLQNSVDDTWTDSNLNRVSVIQFQEETKAEDEDDEAAAERRGLQRRATPHPSEL
KVMKKVIEERRNEAYSSRPDGDEESSDPQDKRLSDLSNQSHDSQVSNSTLSAHSHEERRE
ATVSFQREDLVDSHSPHDEEELDEMEVEYIEPTVHFAEEPIIRGMEDDDVEDGEDGERSE
EEDERPAFPAEKQRLIRKDTPHYKKHFKITKLPKPEAVAALLQGFNPDSLNSPTQVAQNE
QDEEEDEEDGEQGIGTPQRHHRLEPPELDDTRQANSSQVKHTLNIMRQTGGLGISIAGGK
GSTPYKGDDEGIFISRVSEEGPAARAGVKVGDKLLEVNGVDLHEAEHHTAVEALRSSGAT
VSMTVLRERMVEPENAITTTPLRPEDDYFPRERRSSGLAFNLETPPSGPQQRLSTCLIRN
DKGLGFSIAGGKGSTPYRTGDTGIYISRIAEGGAAHRDSTLRVGDRVISINGVDMTEARH
DQAVALLTGTSPTIALLVERDLNAPGGSPGQSRARAHSPPPPEPSYSPDQEEEGLSPHGN
HLSRMEDEYPIEEVTLMKSGGPLGLSIVGGSDHASHPFGINEPGVFISKVIPLGLACQSG
LRVGDRILEVNAIDLRHATHQEAVRALLANKQEIRMLVRRDPSPPGMQEIVIQKQPGEKL
GISIRGGAKGHAGNPFDPTDEGIFISKVSSTGAAARDSRLQVGMRILEVNNHSLLGMTHT
EAVRVLRAIGDSLVMLVCDGFDPQNLATVEASPGTIANPFAAGIVRKNSMESISSIDRDL
SPEEIDIMQKESEMARETSQWEREEMEKVNMGTGPLKLDYKTLAALPTTSLQRVNRAPSS
DFTRTESPIREAPYSPTIQPANIHYTSTPTGKDNTPSSTRPGAIQPVGRVRPSTSPATPD
GHSPNPFQHGPSPFNSQTSDLYGVRNNFLPKQPSPEPELNNEVFDDDVEGQEGAGTGLPS
LSPDRREYMSLAAVPRLSRPSVELKTPSPGGKDSPEQRSFRDRQKYFEIDVKQQTPEKPK
PRVSLVGEDDLKKMREEEERKFEQRAREYLLDEEDEDDEDDMAKQVAQMKATGKVVLDGV
EYKVEPATTPSRLCPTPPSYNVTPPSYCGSSGPSSVDGKGDSQRNSLEDSFRLEQRPNSM
TGLIPVYPGESTAPIRTAKAERRHQEKLRMQSPELSVAPDKDLSPAEKRALEAEKRAMWR
AARMKSLEQDALKAQMVIAKSRDGKKRGTLDQLAESPSPAPTPSPTPMEELSPRGLTSPG
RLSLSSKKFDYRQFAAIPSSKPVYDIQSPDTVDDMQFIDDGSSNPGPGANPEVEVPSPLA
ATSALEEMALYSNKRKLRQGRRSLETAVPT
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagtgtatccccctgtggcgctgcaatcgccacgtcgagtcggtggacaagaga
cattgcaacttgcagacagtccccgatgagatatttcgctacagccgcagcctggaggag
cttctcctcgatgccaaccagctgaaagaactacccaagcctttcttcagactactgaac
ctaaggaagctcggcttgagcgacaatgagatccagagactccctcccgaggtggccaac
ttcatgcagctggtggaactggacatatccagaaacgacattcctgagatccccgagagc
attaagttttgcagggccttggagatcgcagacttcagtggaaaccccctctccagattg
ccggatggtttcactcaactccgagcgctggctcacttggcactcaacgatgtgtcattg
cagattttacccaacgacattggaaatctggccaatctcgtgacgttggagctcagggag
aacctgctgaaatctctgcccacctcgctctctttcctggtgaaactggaacagctggac
ctgggcagcaatgaactggaagttttgccggacaccctcggcgctttgcccaatctgagg
gagctgtggcttgaccgtaaccaattgtcctcattaccaccagagctggggaacctcagg
agactggtgtgtctggatgtgtcggagaatcgtctggaggagcttccctcagagctaaac
ggccttctggctctcaccgacctgctgctcacacagaacctgctggaggtcgtccctgac
agcataggctgtctgaaacagctgtcaatcctgaaggtggaccagaatcgactgacccac
ctgactgattcaataggagagtgtgaaaacctcacagagctcatcctgacagagaaccta
ttacagtcacttcctcgctcgctgggcaagctgaagaagttgaccaacttgaatgtagat
cgcaaccgtttgggcagcgtgcccaaagagctcggcggctgtgccagtctcaacgtgctc
tcattaagagacaaccgtctgggcaaactgcctcctgagctggcagatgccaccgagctg
cacgtgctggacgtggctggaaacagattacaaaacctgcctttcgccctgacaaacctc
aatctgaaggccatgtggctcgccgagaaccagtcgcagcccatgctcaagttccagaca
gaggatgacgagcgtacaggagagaaggtgttgacctgttatctactgccccagcagcct
tccccgagtctagagaatttgctacagaacagtgtggacgacacttggacggacagcaat
ctgaaccgagtgtcagtcattcagttccaggaagagaccaaagccgaggacgaggatgac
gaagctgcagcagagcgcaggggccttcagcgcagagccacaccacatccgagtgagctg
aaggtgatgaagaaggtgatcgaggagaggaggaacgaagcctactcatccagacctgat
ggagatgaagagtcctctgatccacaggataaacggctcagcgacctctccaatcagagc
cacgactcccaggtgtccaacagcacactgtcagcccactcccacgaagagagacgggag
gcgacggtctcctttcagagagaggacctcgtggacagccactcgcctcacgatgaggag
gaactggatgagatggaggtggagtacatcgagcccaccgtgcactttgcagaggagccc
atcatccgcggcatggaggacgacgacgtggaggacggcgaggacggagaaaggagcgag
gaggaggacgagaggccggcttttcccgccgagaagcagcgcctgatcagaaaggacaca
ccacactacaagaagcacttcaagatcaccaagctgcccaagcccgaagccgtggccgcc
ctgctacagggattcaaccccgacagcctcaactctccgacgcaggttgcccaaaacgag
caggacgaggaggaggacgaggaggacggagagcagggtatcggcacgcctcaacggcat
cacagactggagccgccggagctggacgacacccggcaggctaactccagccaagtaaag
cacacgttaaacatcatgaggcaaacgggcggcctgggtatcagcatcgccggagggaaa
gggtccacgccgtacaagggagatgatgagggaatctttatctcgagggtatctgaggag
ggtcctgcagccagagcgggggttaaagtgggagacaaactcctagaggtgaacggagta
gaccttcacgaagcagagcaccacacagcggtcgaagctctccgcagctctggcgcaacg
gtttccatgacggtgctccgcgagcgcatggtggagccagagaacgccatcactacaacg
ccactgaggcccgaggacgactacttccctcgggagagacgcagcagcggcctcgccttc
aacctggagacgccccccagcgggcctcagcagcggctctccacatgtctgatacgcaac
gacaagggactcggcttcagcatcgccggggggaaaggatccacgccgtaccgcacagga
gacacggggatctacatctctcgtatcgcagagggcggagcggcacacagagacagcacg
ctgcgtgtaggcgacagggtgatatctatcaatggtgtagacatgacagaggccaggcat
gaccaggcagtagcgctccttaccggcacctcccccaccatcgccctcctggtagagcga
gacctaaacgcaccagggggctctccgggtcaatcgcgggcacgagcccactcccctcca
cccccagaaccctcatattctccagaccaggaggaggaaggcctttcccctcatgggaac
cacctgagccgaatggaagatgaatatcccatcgaggaggtgactctgatgaagtcaggt
ggtcctctgggcctgagcatcgtgggaggaagtgaccacgccagtcacccgttcggcatc
aatgaacccggagtgtttatctcaaaggtgatccctctcggtctggcgtgtcaaagcggg
ttgcgtgtcggtgacagaatattagaggtgaacgccatcgacctgcgtcacgccacgcac
caggaagctgtacgagccctgctggccaacaagcaggagatccggatgttagtgcggagg
gatccttcaccgcccgggatgcaggaaattgtgatccagaagcagccgggtgagaagctc
ggtatcagtattcgtggaggagccaaaggtcacgcaggaaacccctttgaccccacagat
gagggcattttcatctctaaggtgagttcgaccggtgcagcagcgagagacagccggctg
caggtcggcatgcgcatcctggaggtgaacaaccacagcctgctggggatgacgcacacg
gaggcggtgcgagtgctccgggccatcggagactcgctggtcatgctggtttgtgacggc
ttcgacccacaaaacctggccacagtggaggcgtctcccggcaccatcgccaacccgttc
gcagccggcatcgtccgtaagaacagtatggagagcatctcttctatagacagagacctg
agccccgaagagatcgatatcatgcagaaggagtctgagatggcgagagagacgtcgcag
tgggagcgagaagagatggagaaagtgaacatgggcactggacctctaaaacttgactac
aaaacgctggctgcgctgcccaccaccagcctgcagagggtcaacagggcaccttcctct
gatttcacccggaccgagagcccaatcagagaagcaccttactctcccaccatccaaccg
gcaaacattcattacacctccactcccactggcaaggacaacacaccatcatctacgcga
ccaggagccatccagccagtcgggcgcgtgaggccgagcacctcgccggccactccggac
ggccacagccccaaccccttccagcatggcccctcccccttcaactcccagacctctgac
ctgtacggtgttaggaacaatttcctccctaagcaaccgtctccagagcctgagttgaac
aacgaggtgtttgatgatgacgttgagggtcaggagggagctggcacgggtttgccctcc
ctctcgcctgaccgtcgggagtatatgagcctggcggcggttcctcgcctctccaggccg
tccgtggaactgaagactccttcacctggtggtaaggacagtccagagcagagatccttc
agggacagacagaaatactttgagattgacgtaaagcagcagacgccagaaaaacccaaa
cctcgagtctcccttgtcggagaggatgacctcaagaaaatgagggaggaggaagagagg
aagtttgagcagcgagcgcgggaatacctgctggacgaggaagatgaggatgacgaggat
gatatggctaagcaggtggcgcagatgaaggccacgggtaaggtggtgctggacggagtg
gagtacaaagtggagccggcgaccactccgtcccggctctgccccacaccaccgagctac
aacgtcacaccgcccagctactgtggcagctcggggccttcatcagtcgatggtaaggga
gactctcagaggaattcattagaggacagtttcaggctggagcagcggccaaactccatg
actggtttgatcccggtgtaccccggcgagtcgacggctcccatccgcacagccaaagca
gagcgcagacaccaggagaagctccgcatgcagagccccgaactgtctgtggcccccgac
aaggacctgtcccccgccgagaaacgagctctggaggcagagaagagagccatgtggaga
gcggcacgaatgaagtctctggagcaggatgcactgaaagctcagatggtcatcgccaag
tctcgggatggaaagaagcgaggaacgttggaccagctggcggagtcgccatcacctgca
ccgacaccctctcccaccccgatggaagagctcagtcctcgaggattaacctcaccaggc
aggctgtccctgtcgtcaaagaagtttgactaccgacagttcgctgccattccttcttcc
aaacccgtatacgacatccagtcccctgacacagtcgacgacatgcagttcattgacgat
ggttccagcaatccagggcccggtgcaaaccctgaggtcgaggttccctccccgctggcc
gccacctcagccctggaggagatggctctgtacagcaacaagcgcaaactgaggcagggt
cgccgcagcctggaaaccgccgtgcccacgtaa
DBGET
integrated database retrieval system
