Scomber japonicus (chub mackerel): 128382758
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Entry
128382758 CDS
T09718
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128382758
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128382758
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
PYRIN
NOD2_WH
LRR_6
PRY
SPRY
LRR_4
DED
Motif
Other DBs
NCBI-GeneID:
128382758
NCBI-ProteinID:
XP_053198745
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All DBs
Position
21:complement(994090..1007224)
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AA seq
1177 aa
AA seq
DB search
MASSSEEPNSSNIQVSASKMATLKKTLFKCLEDLKSEEFDKFKWNLTLEDSLPKCELEEA
NRNTTVDLMVQKYCKDAIKVTRNILKEINRNDLVERLSLLPEPEEVLAEAEESDRRGEME
KENTDSEGREDPPLTSGPSGPPETPAAKCRRKLKSNLQEKFQCLFEGIAKAGNPTLLNEI
YTPLYITQGGTAEVNDEHEVRQIETASRKQDRPETTIRQEDIFKASPGRDKPIRTLMTKG
VAGIGKTVLTQKFSLDWAEDKANQDIHFTFPFTFRELNVQKEKKYSLVELVHYFFTETKE
AGICRFEEFQVVFIFDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARL
WITTRPAAANQIPPECVGMVTEVRGFTDPQKEEYFRKRIRDEEQASTIISHIKTSRSLHI
MCHIPVFCWMTATVLEDVKSSKIGELPKTLTQMYLRFVLLQSKVKNIKYDGGAKKDLHWS
PESRDMIESLGKLAFEQLQKGNLIFYESDLTECGIDIREASVCSGVFTEIFKKEDCGLLQ
VFCFVHLSVQEFLAALHVHLTFIKSGVNLLAGNTIISCFTGMFRSKSTRFYQSAVDEALK
SPNGHLDLFLRFLLGLSLQTNQPLLRGLLTQTGSSSQANQKTVKYIKKNINEKLSAERSI
NLFHCLNELNDRSLVEEIQQSLRSGSLSTDKLSPAQWSALVFILLSSQKDLDVFDLKKYS
ASEEVLLRLLPVVKASNKALLTDCKLSERSCAALSSVLSSQSSSLRDLDLSDNNLQDSGV
KQLSAGLESPHCGLETLRLSGCKLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQ
LSAGLETSHCELKTLRLSVCNLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLS
AGLKSPHCELKTLSLSGCLITEEGCASLASALRDNPSHLRELDLSYNHPGDSGEKLLSAG
LEDPHWRLDTLSLQPAGVRWLTPGLRKYFCELTLDPNTMNRKLKLSDNNRKVTYVEEDQS
YPDHADRFDVWPQLLSRSDLTGRCYWEVERRGGVHISVSYRRISRKGNSAACWFGMNNQS
WILRCSDVGYSVCHNKRGSSISSSSSSSSSSSSSSSSVSDRVAVYVDCPAGTLSFYRVSS
DTLIHLHTFNTTFTEPLCAGFGFMDLYHGSSVSLCSL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcctcatccagcgaggagcccaacagctccaacatacaggtctcagcatcaaagatg
gcaacgcttaaaaagaccctctttaagtgtttagaggatttgaaatctgaggaatttgat
aaattcaagtggaacctgacgctggaggacagcctcccaaagtgtgaactggaagaagcc
aacagaaatacaacagtggatctgatggtccagaaatattgtaaagacgccattaaagtg
accagaaatattttgaaggaaatcaatcgtaatgatctagtggaacgtttgtcactcctc
ccagaacctgaagaggttcttgctgaggcagaggagagtgatagacggggtgagatggag
aaagaaaacacagactcggagggaagagaggatcccccactgacctctggcccaagtgga
cctccagaaactcctgctgcaaagtgtcgacgtaaactcaagtctaacctgcaggagaag
ttccagtgtctgtttgaggggatcgctaaagcaggaaacccaacccttctgaatgagatc
tacacaccgctctacatcacacagggagggactgcagaggtcaatgatgaacatgaggtc
agacagattgaaacagcatccaggaaacaagacagaccagaaacaacaatcagacaagaa
gacatctttaaagcctcacctggaagagataaaccaatcagaacattgatgacaaaggga
gtggctggcattggaaaaacagtcttaacacagaagttcagtctggactgggctgaagac
aaagccaaccaggacatacacttcacatttccattcactttcagagagctgaatgtgcag
aaagagaaaaagtacagcttggtggaacttgttcattacttctttactgaaaccaaagaa
gcaggaatctgcaggtttgaagagttccaggttgtgttcatctttgacggtctggatgag
tgtcgacttcctctggacttccacaacactgagatcctgactgatgttacagagtccacc
tcagtggatgtgctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctc
tggataaccacacgacctgcagcagccaatcagatccctcctgagtgtgtcggcatggtg
acagaggtcagagggttcactgacccacagaaggaggagtacttcaggaagagaatcaga
gatgaggagcaggccagcaccatcatctcccacatcaagacatcccgaagcctccacatc
atgtgccacatcccagtcttctgctggatgactgctacagttctggaggatgtgaagagc
agtaagattggagagctgcccaagaccctgactcagatgtacctccgcttcgtattgctt
caatccaaagtcaaaaacatcaagtatgatggaggagctaaaaaagatttacactggagt
ccagagagcagggatatgattgagtctctgggaaaactggcttttgagcagctgcagaaa
ggcaacctgatcttctatgaatcagacctgacagagtgtggcatcgatatcagagaagcc
tcagtgtgctcaggagtgttcacagagatctttaaaaaggaggactgtgggctattgcag
gtgttctgcttcgtccatctgagtgttcaggagtttctggctgctcttcatgtccatctg
acattcatcaaatctggagtcaatctgctggcaggaaacacaataatatcttgtttcact
ggaatgtttagaagcaaatcaacccgtttctaccagagtgctgtggacgaggccttaaag
agtccaaatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagacc
aatcagcctctcctacgaggtctgctgacacaaacaggaagtagctcacaggccaatcag
aaaacagtcaagtatatcaagaagaatatcaatgagaagctgtctgcagagagaagcatc
aatctgttccactgtctgaatgaactgaacgatcgttctctagtggaggagatccaacag
tccctgagatcaggaagtctgtccacagataaactgtctcctgctcagtggtcagctctg
gtcttcatcttactgtcatcacaaaaagatctggacgtgtttgacctgaagaaatactct
gcttcagaggaggttcttctgaggttgctgccagtggtcaaagcctccaacaaagctctg
ctgactgactgtaagctctcagagagaagctgtgcagctctgtcctcagttctcagctcc
cagtcctctagtctgagagatctggacctgagtgacaacaacctgcaggattcaggagtg
aagcagctttctgctggactggagagtccacactgtggactggaaactctcaggctgagt
ggctgtaagctctcagagagaagctgtgcagctctgtcctcagttctcagctcccagtcc
tctagtctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaagcag
ctttctgctggactggagacttcacactgtgaactgaagactctcaggctgagtgtctgt
aacctctcagagagaagctgtgcagctctgtcctcagttctcagttcccagtcctctagt
ctgagagatctggacctgagtaacaacaacctgcaggattcaggagtgaagcagctttct
gctggactgaagagtccacactgtgaactgaagactctcagcctgtcaggatgtctgatc
acagaggaaggctgtgcttctctggcctcagctctgcgggacaacccctcccatctgaga
gagctggacctgagctacaatcatccaggagactcaggagagaagctgctgtctgctgga
ctggaggatccacactggagactggacactctcagcctgcagcctgctggggtccgatgg
ttgacaccaggtctgaggaagtatttctgtgaactcacactggatccaaacacaatgaac
agaaaactcaaactgtctgataacaacaggaaggtgacatatgtggaggaggatcagtca
tatcctgatcatgcagacagatttgatgtctggcctcagctgctgagtagaagtgatctg
actggtcgctgttactgggaggtcgagaggagaggaggagttcatatatcagtgagttac
agaagaatcagcaggaaaggaaacagtgctgcctgttggtttggaatgaacaatcagtcc
tggattctgagatgctctgatgttggttactctgtctgtcacaataagagaggatcatcc
atctcctcctcctcctcctcctcctcctcctcatcctcctcctcttcctctgtctctgac
agagtagcagtgtatgtggactgtcctgctggcactctgtccttctacagagtctcctct
gacacactgatccacctccacaccttcaacaccacattcactgaacctctgtgtgctggg
tttgggtttatggacttgtatcatggttcatcagtgtctctgtgtagtttgtag
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integrated database retrieval system
