Scomber japonicus (chub mackerel): 128382759
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Entry
128382759 CDS
T09718
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sjo04054
]
128382759
Pattern recognition receptors [BR:
sjo04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
128382759
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
PRY
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
128382759
NCBI-ProteinID:
XP_053198746
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All DBs
Position
21:complement(1014364..1022996)
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AA seq
1023 aa
AA seq
DB search
TDSEGREEPPLTSGPSGPPGDSQRHQQTQQTDSEKKREDPPLTSGPSGPPETPAAKCRRK
LKSNLQEKFQCLFEGIAKAGNPTLLNQIYTPLYITEGGTAEVNDEHEIRQIETATRKQDR
PETTIRQEDIFKASPGRDKPIRTVMTKGVAGIGKTVLTQKFTLDWAEDKANQDIDFTFPF
TFRELNVQKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLPLDFHNTEI
LTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQILPECVSMVTEVRGFTDPQKE
EYFRKRFTDEEQASTIISHIKTSRSLHIMCHIPVFCWMTATVLQSTMKSREGGELPKTLT
QMYLRFVLLQSKVKNNKYDGGAKKYLHWSPENKKMIESLGKLAFEQLQKGNLIFYESDLT
ECGIDIKAASVCSGVFTEIFKEEDCGMFPVFCFIHLSVQEFLAALHVHLTFIKSGVNLLA
GNTIISWFTEMLRSKSTCFYQSAVDEALKSPNGHLDLFLRFLLGLSLQTNQTLLRGLMTQ
TGSSTYANQETVEYIKKKISENVSAERSINLFHCLNELNDRSLVEEIQQYLRSGSLSTDK
LSPAQWSALVFILLSSEEDLDVFDLKKYSASEEALLMLLPVIKASKKALLTDCNLSERSC
AALSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLENPHCTLETLRLTDCNLSERSCAA
LSSVLSSQSSSLRDLDLSNNNLQDSGVKQLSAGLESPHCTLKTLSLSGCLITEEGCASLA
SALRDNPSHLRELDLSCNHPGDSGERILSAALEDPHWRLDTLSLQPAGVRWLTPGPWRYF
CELELDPNTMNRKLKLSDNKRKVTLVEEVQSHPDHPDRFDYWPQLLCRNVLTGRCYWEVE
WSGKVDVSVSYRRISRKGNSDDCLFGMNDQSWRLICSDGGYSVCYSVWHNKTETRISASP
SSSSSVSNRVAVYVDCPAGTVSFYRVSSDTLIHLHTFNTTFTEPLYAGFGVYWSDSSLSL
CGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
acagactcggagggaagagaggagcccccactgacctctggcccaagtggacctccaggt
gattcccaaagacatcaacaaacccaacagacagactcagagaagaagagagaggatccc
ccactgacctctggtccaagtggacctccagaaactcctgctgcaaagtgtcgacgtaaa
ctcaagtctaacctgcaggagaagttccagtgtctgtttgaggggatcgctaaagcagga
aacccaacccttctgaatcagatctacacaccgctctacatcacagagggagggactgca
gaggtcaatgatgaacatgagatcagacagattgaaacagcaaccaggaaacaagacaga
ccagaaacaacaatcagacaagaagacatctttaaagcctcacctggaagagataaacca
atcagaacagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaag
ttcactctggactgggctgaagacaaagccaaccaggacatagacttcacatttccattc
actttcagagagctgaatgtgcagaaagagaaaaagtacagcttggtggaacttgttcat
cacttctttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtg
ttcatctttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatc
ctgactgatgttacagagtccacctcagtggatgtgctgctgacaaacctcatcaggggg
aaactgcttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatc
cttcctgagtgtgtcagcatggtgactgaggtcagagggttcactgacccacagaaggag
gagtacttcaggaagagattcacagatgaggagcaggccagcaccatcatctcccacatc
aagacatcacgaagccttcacatcatgtgccacatcccagtcttctgctggatgactgct
acagttctgcagtccaccatgaaaagcagagagggaggagagctgcctaagaccctgact
cagatgtacctccgcttcgtgttgcttcaatccaaagtcaaaaacaacaagtatgatgga
ggagctaaaaaatatttacactggagtccagagaacaagaagatgattgagtctctggga
aaactggcttttgagcagctgcagaaaggcaacctgatcttctatgaatcagacctgaca
gagtgtggcatcgatatcaaagcagcctcagtgtgctcaggagtgttcacagagatcttt
aaagaggaggactgtgggatgtttccggtgttctgcttcatccatctgagtgttcaggag
tttctggctgctcttcatgtccatctgacattcatcaagtctggagtcaatctgctggca
ggaaacacaatcatatcctggttcactgaaatgcttaggagcaaatcaacatgtttctac
cagagtgctgtggacgaggccttaaagagtccaaatggacacctggacttgttcctccgc
ttcctcctgggtctttcactgcagaccaatcagactctcctacgaggtctgatgacacag
acaggaagtagcacatacgccaatcaggaaacagtcgagtacatcaagaagaagatcagt
gagaatgtgtctgcagagagaagcatcaatctgttccactgtctgaatgaactgaatgat
cgttctctagtggaggagatccaacagtacctgagatcaggaagtctctccacagataaa
ctgtctcctgctcagtggtcagctctggtcttcatcttactgtcatcagaagaagatctg
gacgtgtttgacctgaagaaatactctgcttcagaggaggctcttctgatgctgctgcca
gtgatcaaagcctccaaaaaagctctgctgactgactgtaacctctcagagagaagctgt
gcagctctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagt
aacaacaacctgcaggattcaggagtgaagcagctttctgctggactggagaatccacac
tgtacactggaaactctcaggctgactgactgtaacctctcagagagaagctgtgcagct
ctgtcctcagttctcagctcccagtcctctagtctgagagatctggacctgagtaacaac
aacctgcaggattcaggagtgaagcagctttctgctggactggagagtccacactgtaca
ctgaagactctcagcctgtcaggatgtctgatcacagaggaaggctgtgcttctctggcc
tcagctctgcgggacaacccctcccatctgagagagctggacctgagctgcaatcatcca
ggagactcaggagagaggatcctgtctgctgcactggaggatccacactggagactggac
actctcagcctgcagcctgctggagtccgatggttgacaccaggtccttggaggtatttc
tgtgaactggaactggatccaaacacaatgaacagaaaactcaaactgtctgataacaaa
aggaaggtgacacttgtggaggaggttcagtcacatcctgatcatccagacagatttgat
tactggcctcagctgctgtgtagaaatgttctgactggtcgctgttactgggaggtcgag
tggagcggaaaggttgatgtatcagtgagttacagaagaatcagcaggaaaggaaacagt
gatgactgtttgtttggaatgaacgatcagtcctggagactgatctgctctgatggtggt
tactctgtctgttactctgtctggcacaataagacagaaacacgcatctccgcctccccc
tcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggcact
gtttccttctacagagtctcctctgacacactgatccacctccacaccttcaacaccaca
ttcactgaacctctgtatgctgggtttggggtctactggtctgattcctcgttgtctctg
tgtggtttgtag
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integrated database retrieval system
