Scomber japonicus (chub mackerel): 128382822
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Entry
128382822 CDS
T09718
Symbol
cacnb2a
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2a
KO
K04863
voltage-dependent calcium channel beta-2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04010
MAPK signaling pathway
sjo04260
Cardiac muscle contraction
sjo04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128382822 (cacnb2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
128382822 (cacnb2a)
04261 Adrenergic signaling in cardiomyocytes
128382822 (cacnb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sjo04040
]
128382822 (cacnb2a)
Ion channels [BR:
sjo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
128382822 (cacnb2a)
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GFIT
Motif
Pfam:
Guanylate_kin
SH3_1
Motif
Other DBs
NCBI-GeneID:
128382822
NCBI-ProteinID:
XP_053198798
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Position
21:complement(4055760..4092562)
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AA seq
724 aa
AA seq
DB search
MDDQLNAELLKLFELCLEQKPLGEPQRTQKPLGGPQRTQKPLGEPRRTQKRLCVRRKRGR
KERSKEEKRKETKPVAFAVRTNVNYSPSHDDDVPVPGMAISFEAKDFLHVKEKFNNDWWI
GRLVKEGCEIGFIPSPVKIENSRILQEQRAKQGKFHSSKLGANSSSSLGEVVPNSRKSTP
PSSAIDIDATGLDPEDNELPVNLRSPKASPNTVMSPLAKEKRMPFFKKTEHIPPYDVVPS
MRPVVLVGPSLKGYEVRQRSDICFILFYVLMFEGKISITRVTADISLAKRSVLNNPSKHA
IIERSNTRSNLAEVQSEIERIFELARTLQLVVLDADTINHPSQLGKTSLAPIIVYVKITS
PKVLQRLIKSRGKSQAKHLNVQMVAADKLAQCPPEMFDIILDENQLEDACEHMADYLEAY
WKSTHPTSCNPPNPLLTKLPTATLPSSPAPVSVVQSGGAEQKGDKALVERKGSREDHHHH
HHHHHQNQNQADAEAEGDANEEEEEERPLRTESSRRAQHIHHRSSSTRTEHHNHHHHHHH
HSGRGRGLSRQETLDSETPESRESRESRESRESKDSAYNEPRTQLHHQEEEEEEEEEEEE
VEDEEEEEEEEDEEDLGEGHPQQQQRYEPLPHRDHNHHHHHHHHHRGGADEAGHSTGHHR
SKEREQDHNERNKQRSHHHHRPTRDHHHHYYDRDRDRDREGEVAVAPKKRGDGGEWARDS
YIHQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagctcaatgcagaactgctcaaactgtttgaactgtgtttagagcagaag
cccctcggcgagccgcagcggacacagaagcccctcggtgggccgcagcggacacagaag
cccctcggcgagccgcggcggacacagaagcgactgtgtgtaaggaggaaaagaggaagg
aaggaaaggagtaaggaggaaaagaggaaggaaactaaaccagttgcatttgctgttcgc
acaaatgtcaactacagcccgagtcacgatgacgacgtccccgtgccgggaatggccatc
tcctttgaggctaaagacttcctccatgtcaaagagaaattcaacaatgactggtggata
ggacgcctggtgaaggaaggctgtgaaatcggtttcatcccgagtccggtgaagattgaa
aacagtcgaatcctccaggaacagagagccaaacagggcaagttccactccagtaaactg
ggagcaaactcatcgtctagtttaggtgaagtggttcctaactcacggaaatctactcct
ccttcgtctgccattgacatagacgccacaggcttagaccccgaggacaatgagcttcca
gtcaacctgcgctcccctaaagccagtccaaacactgtcatgtcacccctagcaaaagag
aaacgaatgcctttctttaagaagacggaacacattcctccgtatgacgttgtgccttct
atgcggcccgtggttctggttggaccgtcactgaagggctacgaggttcgtcaacgctct
gatatctgttttattttattttatgttttgatgtttgaaggaaaaatatcaatcactcga
gtcacggcggacatctctcttgccaaacgctccgtcctgaacaatcccagcaagcacgcc
atcatcgaacgctccaacacacgctcaaacttggcggaggtccagagtgagatcgagcgg
attttcgaactggctcggacgttacagctggttgttctggacgccgacaccatcaaccac
ccgtcgcagctgggaaagacttcgctcgcccccatcatcgtctacgtcaagatcacctct
cccaaggtgctgcagaggctcatcaaatccagaggaaagtctcaggccaaacacctcaac
gtacagatggtggcggcggacaaactggcccagtgccctcctgagatgtttgacatcatc
ctagatgagaaccagctggaggacgcgtgtgagcatatggccgattacctggaggcctac
tggaaaagcactcacccaaccagctgcaaccctcccaacccactgctaacaaagctgccc
acggccactttaccctccagcccggccccggtctccgtcgtgcagagcggcggagcagag
cagaaaggagacaaagcgttagtggagaggaagggctcccgagaggaccaccatcatcac
caccaccaccaccaccagaaccagaaccaggccgacgccgaggccgagggggacgccaac
gaggaggaggaggaggagcggccgctgaggacggagtcgtcaaggagagcccagcacatc
caccaccgttcgtcttccaccaggactgagcaccacaaccaccatcaccaccaccaccac
cacagcggccggggcaggggtctctcccggcaggagactttggactcggagacccccgag
agcagagagagccgagagagccgggagagccgggagagcaaggactcggcttataacgag
ccgcgcactcagctccaccaccaggaagaagaggaggaggaggaggaagaggaggaggaa
gtggaggacgaggaggaggaagaggaggaggaggatgaggaggatctaggggaggggcat
cctcaacagcagcagcgatacgagccgctgccccaccgggaccacaaccaccaccatcac
caccaccaccatcaccgagggggagcggatgaagccggacacagcacgggacaccaccgc
tccaaagagcgagagcaggaccataacgaacggaacaagcagcgctctcaccaccaccac
cggcccacgcgtgaccaccaccaccactactacgaccgggacagagacagggaccgagag
ggggaggtggcggtggctcccaaaaagaggggggatggaggggaatgggccagagactcc
tacatccaccagtga
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