KEGG   Scomber japonicus (chub mackerel): 128383292
Entry
128383292         CDS       T09718                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
sjo  Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:sjo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjo03400]
    128383292 (per1b)
DNA repair and recombination proteins [BR:sjo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    128383292 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 128383292
NCBI-ProteinID: XP_053198877
LinkDB
Position
22:complement(14820647..14841826)
AA seq 1442 aa
MSYDSSNSVASSNARGRVARAGEKDNDQEAQFEGLNSPKSSSSGSQPGANVSTQEQGSRA
DGGSSPSGGSGSGGMSSDQRGPNSDDMDGLSSGNDSGERESEGGMERGGSSHGRQSIRSS
HSSSNGKDSGMMLETTESNKSSNSQSLSPPSGSLAYSLLMTSSEHDPPSTSGCSSDQSAR
VQTQKELMKAIKELKLRLPSERKSKGHSSTLNALKYALQCVRQVRANKEYYHQWSVEECH
GCSLDLSAFTIEELDNITSEYTLKNTDTFSMAVSFLSGKVVYVSPQGSSVLRCKPECLQG
TMFSELLAPQDVSTFYSGTAPCRLPLWASCIGSASPPVDCTQEKSMFCRISANRMQGSEM
RYNPFRLTPYQLTIRDSDTSEPQPCCLLIAEKVHSGYEAPRIPPDKRIFTTSHTPSCLFQ
EVDERAVPLLGYLPQDLVGTPTLLYIHPEDRPIMVAIHEKIFQFAGQPFEYAPLRMCARN
GEYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTSPLNEDVFTIPHGCEGRTTTPDVVQLSE
KIHRLLVQPVHSGSSQGYSSLGSSGSRGSRRSHQQHLSAASSSDSNGPVMDEAAVAIALH
KPMTFQQICKDVHTVKTNGQQVFIESRNRPLPRKNTNTGTAASLRAINSDPIKGLVADMT
KPPAALVPGPLVQKEHPTGYSYQQINCLDSIIRYLESCNIPNTVKRKCGSSSYTTSSTSD
DDKQQEASGNTKGGSVSLVGEPAPLPPLTMATKAESVASVTSQCSFSSTIVHVGDKKPPE
SDIIMEEVPITPTPAPPFTATPAARGLTPPANTAIAPPLPPPPPPPPVRDTWRSGSGGGG
GGSGGRRGLTKEVLSAHTQQEEQAFLHRFKDLSKLRVFDQTASSTVRCHTQAANPLSRGV
RCSRDYPAAGGSTGRRGRGGKRLRHQESSDQHSSMGLNGNHRDLRTATVPGPLNMTLGPQ
TSSSSWPSVCSQASIPAAPFAPGMLPIYPVYPPLAQPLPVPDPLRFPATQMVPPMMALVL
PNYMFPQMGAPISQPAANPGHFYNPNFTYPGTTPAAVSNPMPIPPVTVAPSRSSTPQSYN
QTPADREGAESPLFQSRCSSPLNLLQLEESPSNRLEVATALAASQQATPSVQGGAAPGSP
NQRSSDDTSKENENENGETNESNQDAMSTSSDLLDLLLQEDSRSGTGSAASGSGSSGTRS
SGSGSGSGSNGCSSSGTSGTSSSQGSHTSKYFGSIDSLENDHTRKQPTGGSSSTGGDGGE
EQFIKCVLQDPIWLLMANTDDKVMMTYQLPVRDLDTVLREDREALRNMQKQQPRFTEDQK
RELSQVHPWIRTGRLPRAVNISGCTGCKSPSSALPATPFDVEIHEMELCSVLKSQEEDAD
KAKKKQSETAMDETQPEDEDEEEEVEEKGTKTQDSNQDMTTEEQRETSESVAVKSNESDM
TH
NT seq 4329 nt   +upstreamnt  +downstreamnt
atgagttatgacagctctaactcagtggccagcagcaacgctcgggggcgagtggcaagg
gccggcgagaaagacaatgaccaggaagctcagtttgaagggttaaactcgccaaaaagc
agcagcagcggcagtcagcccggtgccaatgtcagcacccaggagcaaggaagcagagcc
gatggaggctcttctcccagcggagggtcaggatctggagggatgtccagcgaccagagg
ggccccaattccgacgacatggacggcctctccagtgggaacgactccggggagagggaa
agcgagggcggcatggaaagggggggcagctcacacgggcgtcagtccatacgcagctcc
cacagttcgtccaatggcaaagactctggcatgatgctggaaaccacagagagcaacaag
agctccaactcccagagtctctcaccacccagcggctccttggcctacagcttgctcatg
accagctcagagcacgaccctccctccacctctggctgcagcagcgaccagtcggcaagg
gtccagacccagaaagagctgatgaaggccatcaaggagctgaagctccgcctgccatct
gagcgcaaatccaagggtcactccagcactctaaatgcacttaaatatgccctccagtgt
gtcagacaagtccgagccaacaaggagtactatcatcagtggagtgtggaggagtgtcat
ggctgcagtctggacttgtctgccttcacaattgaggagcttgacaacatcacctcagaa
tacaccctcaaaaacactgacacattctcgatggctgtgtctttcttgtcagggaaagtt
gtgtacgtatcaccccagggctcgtccgtgctgcgctgtaagcccgagtgtctccagggg
accatgttttcagagcttttggcgcctcaggatgtcagcactttctacagcggcacagca
ccttgccgcctcccactctgggcgtcgtgcatcgggtctgcttctcctccagttgactgc
actcaggagaagtccatgttctgtcgaatcagcgccaaccggatgcagggcagcgagatg
cgctacaacccctttcgcctcacaccctaccagctcaccatcagagattcagacacctct
gagccacagccttgctgtctgctcattgctgagaaagtccactctggatacgaggctcct
cggattcctccagacaagaggattttcaccaccagtcacactcccagctgcctttttcag
gaagttgacgagagggctgtgccgttgttgggctacctgcctcaggacttggtgggaacc
cccactctgctctacatccaccctgaggacagacccatcatggtggctatacacgagaag
atctttcagtttgcagggcagccgtttgagtacgcgccgctaaggatgtgcgcccgcaat
ggtgaatacctgaccatcgacaccagctggtcttccttcgtcaacccctggagccggaag
gtggcatttattgttgggcgccacaaagtcagaacgagcccactgaacgaggacgttttc
acgataccgcatggctgcgagggtcgcaccacaactccagatgtcgtgcagctgagtgag
aagatccaccggctcctggtgcagcccgtgcacagcggcagctctcagggctacagctca
cttgggtccagcggctcccgaggctctcgccgctcacaccagcagcacctcagtgccgcc
tcctccagcgacagcaacggccccgtcatggacgaggctgccgtcgccatcgctttgcac
aagcctatgacgttccagcagatctgcaaagatgttcacacggtcaagactaacggacag
caagttttcatcgagtcccgtaaccggccactgcccagaaaaaacactaacacaggcaca
gcagccagcctcagagctatcaatagcgacccaatcaaaggtctggtagctgatatgacc
aagccccctgcagccctggtccccggcccgcttgtacagaaggagcaccctactggctac
tcctaccagcagatcaactgtctggacagcatcataaggtacttggagagctgtaacatt
cctaacacagttaaaaggaaatgtggctcgtcctcctacaccacttcctccacgtctgat
gatgacaaacagcaggaagccagcggaaacaccaaaggcggttcagttagcctggtaggg
gagcctgcccctctgccaccactgaccatggccaccaaggcagagagtgtagcctcagtc
acttcccagtgtagcttcagcagcaccattgtgcatgtgggagacaagaaacctcctgag
tcagacatcatcatggaggaagttcccatcactcccacgcctgctcctcctttcactgct
actcctgccgctagaggcctgacgcctcctgctaacacagccatcgcccctcctcttcct
cctcctcctcccccgcccccagtgagggacacctggagaagtggaagtggaggaggtggt
ggaggaagcggaggccgacggggacttacaaaggaggtactctccgcccacacccagcag
gaggagcaggcgttcctccaccgctttaaggacctcagcaagctgcgcgtgttcgatcag
acggcgtcttcgaccgtgcgctgccacacacaggctgccaaccctctctcacgaggagtg
cgctgttctcgcgactacccagccgcaggaggcagcaccggcagacgtggccgtgggggt
aaaaggctcaggcaccaggagtcatctgaccaacacagctccatgggcctgaatgggaac
cacagagacctcaggaccgccacagttcccgggcccctcaacatgactctcggaccccag
acaagctcctcctcctggccatctgtgtgctcccaagccagcattcccgcagcccctttc
gcccccggtatgcttccaatctaccccgtctacccaccgctcgcacagccattaccagtc
cccgatccattgcgtttcccggctacccagatggtgcctcccatgatggccctcgttctg
cccaactacatgttcccccagatgggagcgcccatttctcagccggccgccaaccccgga
cacttctacaatcctaactttacttaccctggcaccaccccagctgctgtttccaaccca
atgcccattccaccagtaacagttgccccgtctcgtagcagcaccccccagtcatacaat
cagacacctgctgaccgcgagggggcagagtcccccctcttccagtcccgatgctcttcc
cctctcaacttgttgcagcttgaggagtctcctagcaaccggttggaggtcgccacggcc
ctggctgcttcacagcaagctacaccttctgtgcagggaggtgcagcccccggctcacct
aaccagaggagctccgatgacacctccaaggagaacgagaatgagaatggtgaaactaat
gagtccaaccaggatgccatgtccacatccagtgacttgctggatttgttactacaggaa
gactcccgctcaggcactggctccgctgcttctggatcaggatcctcaggcacgaggtcc
tcgggttccggctccggctccggctccaacggctgcagctcctctggcaccagcggcacc
agcagcagccagggcagccacaccagcaaatactttggtagtatcgactccttggagaac
gaccacacccgcaaacagccaacagggggcagcagtagcaccggtggagacggaggcgag
gagcagtttatcaagtgcgtcctgcaggatcccatctggctgctgatggccaacactgac
gacaaggtcatgatgacatatcagctgcctgtcagggacttggatacggtactgcgtgag
gatcgtgaggccctcaggaatatgcagaaacagcagccacgtttcacagaggaccagaag
agagagctcagccaagtgcacccctggatccgcacaggacgtttaccaagagccgtcaat
atctctggatgtacaggctgcaagtctccctcctctgcacttcccgccaccccatttgac
gtggagatccacgagatggagctgtgcagtgttctcaagtctcaggaagaggatgcggat
aaggccaagaaaaaacagtctgagacagccatggacgaaacccagcccgaggacgaagac
gaggaagaagaggtcgaagagaaaggaaccaaaacacaagacagcaaccaagacatgacg
acagaggagcaaagagagacctcggagtctgtcgcagtaaagtctaacgagtctgacatg
actcactga

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