Scomber japonicus (chub mackerel): 128383293
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Entry
128383293 CDS
T09718
Symbol
dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sjo04131
]
128383293 (dennd4c)
Membrane trafficking [BR:
sjo04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
128383293 (dennd4c)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
DUF2464
PPR_2
PPR_long
PPR
PPR_3
Motif
Other DBs
NCBI-GeneID:
128383293
NCBI-ProteinID:
XP_053198879
LinkDB
All DBs
Position
22:10982769..11018153
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AA seq
1919 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKSPITDLAVINRSAGETVPEGFT
CIDSTYSGQPANLNHGSLKSPELFLCYRRARGKAPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTNKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSISYKAGLIFRYPEEDYESFPLSESVPLFCLPMGAKIEC
WAPNTRDPLPVFSTFVLTISSGEKVYGSAIQFYEPYQVDLLSEKQKIQLGLLTTVEKKMI
PNRPVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHSVSFPSPQ
RPRILVQLSAHDTLILSQPVCTPLPLSGADYSTLLMNLGSENCATVLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPCPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLINSLSNLHHQLATVSVRQTTQEESAV
DMTPIEADFTWHKKKTALEMEIQEAFLRFMASILKGYRSYLKPITQAPSEKATAADSLYD
LQGFLKSRDRAHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCVEKLFPSDKITD
KGTKVEGETSEDTRLLELDESQKSEHTVFVMPPEPPVESGSEPSARYTYKSFPRLQIELF
DRPRELRPAISSRAAGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPQLWSRCLFSHCY
SLWFICLPAAVRLAKSKSRAMHQAYNVLLKMRTTEVEVLDEVCYRVVMQLCGVWGLPVMA
VRVLVEMKKAGVHPNAITYGYYNKAVLESPWPSRNRSGLFMWTKLRNVLRGVGQFKQALD
RTSSKKEPANSTTAASIGGSSVTDADRLSHGSADSSSEVNGEEHNLFAHNHNMGDSTDNH
CSTGRQYDQGYGSKDELHQELAEPSHVLSTDNTNTVKAQRNGGDISSSVDSAVAVAEPPS
PVDVPSSVPSIVKLSTGSFDAGRETGAGKLFRRQSNNEDVSLPDDDASVASVDVANKPQQ
QRQKAFAERSCSFSAETRAGMLLEKGVDHMASQMGADARILTAALSGGQSPTPNVVPKAL
FKDLEEEPEDDQGLTLGKLSEEAPEEGKGLDKEANEVKIEKRERKQTETQDDESGARGVP
LERADVEAGADPLSILVSETEESASVNSQEPPRSVPAVVSRNLAEEIEMYMSLRNPMGAK
SSSMELQQAQGDSIDAPQPKPTIERRASLPVPPVKTPIGSPGDTPKRSPSTVTRSKTFAV
KTKTSGSTTASPGPRSSSLTALVKSSQGGSLGSVINSISGIKMDTLLSGPKIDVLKSSMK
QAANVASKMWGAVASAYAYSDDEDEQGQGGCGFPAHLDEHMLAAHDIDDSPDRGAIPGLV
ANGLNQSCTSLGSSSGSSDTGRGTHQTHPTPGRAGRGPDSEQGSSLHASSSSIYQNCALE
VLMSSCSQCRSCEALVYDEEIMAGWTADDSNLNTNCPFCRTAFLPLLHIEFHDLRTMTGF
YMNPSASGDSIHSTSAQPTPSSSADIKVPDLISFPEEDSRETTDNNAGAQKSLIPEPVQS
DPLGLLEHQAAGKQQKCSGTSLTRSNSVGGPLQSLDSSQRPGHGVSTTSLPCSLQEVSDG
MGTKRPNPKPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVLYFRRL
DLPTHLPGLILNSEHCNNGVQLPLTSLSQDSKQVYVQLLWDNINLHKEPEEPLYLLWRTF
MEKKGTLAPTDHQEIRTLLNTIVRNIQTNDVYGPINLLIREIKRRPEGVKRQRSIYREIL
FLSLVALGRENIDVEAFDREYRQAYDELSAEQLKSLHRMDRPPSPSMQWCLKCFGPPVI
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggtcaccgtgtgactgactactttgtggtggccgggctgacagac
aagtccacgccattggagcaggacctgtcagagaccaagtccagcgggcccaaatcgccc
atcactgaccttgccgtcattaacaggtcggctggggaaacggtgcctgagggcttcacc
tgcattgacagcacctacagcggccagccagccaaccttaatcatggcagtctgaagagc
cccgagctctttctgtgctacagaagagctcgagggaaggctcctctcattgacattggt
gtgctgtacgagggcaaggagcgtctgatccagggctgcgaggtcatccaggccacgcca
tacggccgctgcgccaatgtcaacaacagctctgccacctcacagcgcatcttcatcacc
ttccgccgcgcaccacccgtccagcctcagaattccctggcggtgacggacatctgtgtc
atcgttaccaacaaaggcgagacgccaccacataccttttgcaaggtggacaagaacctc
aactgtggcatgtggggttccagcgtgtttctgtgttataagaagtcagtatctgcgtcc
aattctatcagttacaaagccggtctcatctttcgttacccagaggaggactatgagtct
tttccattgtcagagtctgtgcctctgttttgtctgcccatgggcgccaagattgaatgt
tgggcaccaaacacacgtgaccctctgcctgtcttctccacgttcgtcttaaccatctct
tctggtgaaaaggtgtatggatcagccatccagttctatgaaccgtatcaagtggatctt
ttgagtgagaagcagaagatccagctgggcctactcaccacagtggagaaaaagatgatc
ccaaaccggcctgtaaacaccaataaatgcatctgtctcctctcccgctggcccttcttt
gagtccttccgcaagttcttaatgtttctctacaagctgtccgtctcaggcccgcaccca
ctgcctattgaaaagcacatctcgcacttcatgcacagtgtgtcatttccttctcctcaa
aggcctagaatcttggtccagctctcagcacatgatacgttgatcctctcccagcctgtg
tgtacacctttacccctcagtggggcggactacagcactctgctgatgaatctgggctca
gagaactgcgccacggtgttgcacttcgtcctgctggagagcaagatcctgttgcactcg
ctgcggcccgctgtgctcactggagtggccgaggctgtggtggctatgatcttccccttc
cagtggcagtgtccatacatccccctgtgcccgctctctctagcaggcgtcctcaacgcc
ccatgtccgtttatagttggtgtggactcccgctacttcgacctttacgaccccccacca
gatgttgtctgtgtggatctggacaccaacactatctacctgtctgatgagaagagacac
agcaactggaaaaacctcccaaagaaaccctgcaagagcctcattaactcactaagcaac
ttgcaccaccagctggccacagtttcagtgcgtcaaaccacacaggaagaatcagcagtg
gacatgacccccatcgaggcagacttcacatggcacaagaagaagacagccctggagatg
gaaatccaggaagcgttccttcgcttcatggcatccatcctgaagggctaccgctcctac
ctcaaacccatcacccaggcaccatctgagaaggccacggcagcagactctctttatgat
ctgcaagggtttctaaaaagcagagaccgtgcacaccagaaattctactcccagctcacc
aagacccagatcttcatccgcttcatcgaggagtgcacttttgtcagtgacaaggacacg
ggtttggccttttttgacgactgcgtcgagaagctttttccctctgataaaatcaccgac
aagggcaccaaggttgaaggagaaacatctgaggatacgaggctgttggagctggacgag
tcccagaagagtgagcacaccgtttttgtcatgcctcctgaacctccagttgaaagcgga
tctgaaccctctgccagatacacctataaaagtttccccaggctgcagatagagctattt
gaccgtcccagggagttacggccagcaattagcagcagagcagctggggccagtctgtcc
agcagccctgcactactggctaagaggacaaagcaggaaatcaagctagcgtacaaaatg
gcgaagcgtttctactccaaccctcagctgtggtcccgttgtctgttcagtcactgctac
agcctgtggttcatctgcctgccagcagctgtaagactggccaagtccaaaagcagagcc
atgcatcaggcatacaacgtcctcttaaagatgaggaccactgaggtggaggtgctggat
gaggtgtgttacagagtggtgatgcagctctgtggtgtttggggtcttcctgtcatggct
gtgcgagtcctggttgagatgaagaaagctggagttcatcccaatgccatcacatatgga
tactacaacaaggcggtcttagagagcccgtggcccagccgaaaccgcagcggcctattt
atgtggacgaagcttcgtaatgtgctgcgtggagtgggccagttcaagcaagctctagac
cgtacatcttccaagaaggaaccagctaattctaccacagctgcatcaataggtgggtca
tcagtcactgacgctgaccgtttgagtcatggaagtgcagacagctcaagtgaagtcaac
ggtgaggaacataacctatttgcccacaaccacaacatgggagactcaacagacaaccac
tgtagtacaggcagacagtatgatcaaggctacggctccaaggatgagttacatcaggag
ctggctgagccttcacacgtcctttccactgacaacacaaacactgtcaaagctcaacgt
aatggaggtgacatttccagctcagtggacagtgcggtagctgtagcagagcccccaagt
cctgttgatgtgccctcgtctgttcctagtattgtgaagctgtccacagggagctttgat
gctggcagggaaacaggtgcaggaaagctgttcaggaggcagagcaacaatgaagatgtg
tctctacctgatgatgatgcttcagtggcttctgtggatgtagctaacaagcctcaacag
caacggcagaaagcctttgctgaacgcagctgtagcttcagcgctgaaacccgagctgga
atgcttttggagaaaggcgtggaccacatggccagccagatgggcgctgatgcccgtatt
ctgactgcagcgctctctggaggtcaaagtccaacacctaacgttgtgcccaaagcactt
tttaaagacctggaagaagaaccagaagacgatcagggcttgacactggggaagctgtca
gaggaagcaccagaagaaggaaagggacttgataaagaggcgaatgaagtgaaaatagag
aaacgagagaggaaacagactgaaacacaggacgatgagtctggagcgcggggagttccc
ctcgagagggcggacgtggaggcgggtgccgacccactctctatcctggtttcagagact
gaagagtctgcctcagttaacagccaggagcctccacgctccgtgcctgctgtggtgtcc
cgcaacctggccgaggaaattgaaatgtacatgagtcttcgaaaccccatgggtgctaag
tcctccagcatggagctccagcaggcccagggagactccattgacgccccacagcccaaa
ccgaccatagagcggcgggccagcctccctgtgcctcctgttaaaactccaattggctcc
ccaggagacacacccaaacgcagccccagcactgtcactcgctccaagacattcgctgta
aagacaaagacatcaggcagcacaacggctagcccaggtcctagatcgtcctcactgacg
gcgctggtcaagtcctcccagggagggtcgctgggctccgtcattaactccatttcaggc
atcaagatggacaccctgttgtctgggcctaaaattgatgtgcttaagtcaagcatgaag
caggcagcaaatgtcgctagcaaaatgtggggggcagttgcttcagcatacgcctattca
gatgatgaggatgaacaaggtcagggtggctgtgggttcccagcccatctggatgaacac
atgctggcagcacatgacatcgacgacagtcctgatagaggagccatcccagggttggtg
gccaacggtctgaaccagagctgcaccagcctgggcagcagcagtggcagtagcgacaca
ggccgaggcacacaccagacacatccaactcctgggagagcaggcaggggtcctgactct
gagcaaggctcctcacttcacgcctcctcctccagcatctaccagaactgtgcactggag
gtgctgatgtccagttgctctcagtgccgctcctgtgaagcgctggtgtatgatgaggag
atcatggcaggttggacagccgacgactccaatctcaataccaactgtcctttctgtcgc
acagccttccttcccttgttgcacattgagtttcatgacttgcggacgatgaccgggttc
tatatgaatcctagtgcctcaggagacagtatccacagcaccagtgcccagcccacccct
agcagttcagctgacattaaggtgccagaccttatcagtttccctgaagaggattcgagg
gagactacagataataatgctggagcacaaaagagtctgattccagagccagtgcagtcg
gaccccctgggtctactggagcaccaggctgcagggaagcagcagaaatgcagtgggacg
tcactgacacgcagcaacagtgttggaggcccactgcagagcctggactcctcccagaga
cctggtcatggtgtctcaactaccagcctgccctgcagcctgcaggaagtgtcggatgga
atgggaaccaaacgaccaaaccccaagcctgtgtccgtaccgtacctcagccccttagtg
ctgcgcaaggagctggagaccctactggagaatgagggagatcaggtgatctacacccac
aaattcctcagccagcaccccatcatcttctggaacctggtgttgtatttccgccgcctt
gacctgccgactcacctgcctgggctcatcctcaactctgaacactgcaacaacggagta
cagctgcccctgacgtcattgtcccaggacagtaagcaggtgtacgtccagctcctgtgg
gacaacatcaacctgcacaaggaaccggaagaacccctctacctactctggaggaccttt
atggaaaagaaggggacattggctccaacagaccatcaggagattcgtacgcttctcaac
acaattgttcgcaacatccagaccaacgacgtctacgggccaatcaacctgctgatccga
gagatcaaacggcgtcctgagggggtcaaacgtcagaggagtatttatagggaaatatta
ttcctctcactggtggccttgggacgggagaacatcgacgtagaggcttttgacagggag
taccgccaggcctacgatgaacttagcgcagagcagctcaagtcgctgcaccgcatggat
cgcccacccagccccagcatgcagtggtgccttaaatgcttcggaccgccagttatctga
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integrated database retrieval system
