Scomber japonicus (chub mackerel): 128383302
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Entry
128383302 CDS
T09718
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 4
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128383302
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128383302
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
SALM family
128383302
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
128383302
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
ig
Ig_2
fn3
LRR_5
LRR_9
LRRCT
Motif
Other DBs
NCBI-GeneID:
128383302
NCBI-ProteinID:
XP_053198890
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Position
22:complement(10529458..10547836)
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AA seq
1056 aa
AA seq
DB search
MPVPPPLNPRRQKHLPHTHIHPEQRAKHSTFPSFFPPSILSFSLLPPLLVSSLPSSSHLI
HCACSRATKRTLPDSVPFPAFHWLTLVTCCLLPSLIGAGETWGVVSACPFHCVCRNLSES
LSTLCADKGLLFVPPHVDRRTVELRLADNFITEVGGIDFVNMTGLVDLTLSRNTIHLIRP
MAFADLESLRSLHLDGNRLTIVGPRDLAGLVNLQHLIINNNQLVKVSVQAFDDFLLTLED
LDMSYNNLRRVPWESIQNMASLHTLNLDHNLIDHIAEGVFGELYKLARLDMTSNRLRTLP
PDPLFARSQTGAISPTPYNAVISLNFGGNPLHCNCELLWLRRLIRGDDMETCATPAHLAG
RYFWSIPEEEFTCEPPLITRHTHKLWVLEGQRATLKCRSIGDPEPVVHWVSPDDRIIANS
SRTSSFSNGTLDILVTVARDDGAYTCIAINAAGEATATVDLKIIPLPHRGGAGGNTGNNN
VNTKNNRNVTSGILRTDPGSSDISTGKNGGINNGVGRGGEVEDGRREGGEDNEGDSGRVS
EVERADGGSMEDDEGDNEEGRMVGVQGVTSTSAQVRWDLGRLSAAYVVWMYQIQYNCTAD
ETLIYRILPSTSDRFLLKNLVSGVDYNLCVLAIFDDTITSLAATKVLGCTTFSTKDVYPA
CRSLQAHFLGGTLTILVGGVVVVTLLVFTVALMVRHRVCNHGDHMICHNSNTEAGGGACC
QGGGVGAGDKGGNSSGCYQSNGSGDMMMVVLPNGLPTKRGGEKDKDKDKDKDKEKEKKKE
AADSASSLPPKLPPKPRPKPKVNLEQFLSAGGVVSTMAGTGGEMALVVRQRKLEKAPPYT
PESDRTPLYYSPSPPSTLPRQSRSRERPRPRLERELTNRASFSLAAPLRDSDLLDWRIAP
RGRDKWNSSQAYQSPVSPLNPSCGTVSKRRHSLDMGSSVALATDAAATVAKRYGAVSYAK
RLSVIWTRRSQSLHGMLVQCASTTSTTSSTTSDETENGGGYGAHCELQRGYIHAYNTTNS
NSNTGITTGKGSSVKDRGREKGKDGRSAEELEESVV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtccccccacccctcaatccccgcagacaaaaacacctgccccacacacacatc
caccccgaacaaagggcaaaacattccaccttcccctctttctttcctccatccatcctc
tctttctctcttctcccccctctccttgtctcatctttgccctcctcatcccatctcatc
cactgtgcctgctccagagctacaaaacgaacccttcccgactctgtcccttttccggct
ttccactggcttactctggtcacatgctgcctgctgccttctctgattggagcaggggag
acgtggggcgtggtctcagcctgtcccttccactgcgtatgtcgaaacctttcagagtcg
ctcagcacactctgtgccgacaagggcctcctgttcgtccccccgcacgttgaccggcgc
accgttgagctgcgactagcggacaacttcatcacggaagtgggaggaattgactttgtc
aacatgactggattggttgatttgactctgtccagaaacaccatccacctgattcgaccg
atggcctttgctgacctggagagtctgcggtccttgcatctggatggtaatcgcttgaca
atagttggacccagggaccttgcaggtttggtgaatctgcagcacctgatcatcaacaac
aaccagctggtcaaagtctctgtccaggcctttgatgactttttgctcacattagaagac
cttgacatgtcatacaataacctcagaagggtaccatgggagtccattcagaacatggcc
agtctgcacactctgaacctggaccataacctgatagaccacattgcagaaggagtcttt
ggagagttgtataagcttgcaaggctggatatgacctccaacaggcttcgaactctgcct
cctgatcccctcttcgcaaggtcccagacaggtgcaataagccccaccccctacaatgct
gtcataagcctaaattttgggggtaacccactgcactgcaattgtgaactgctatggttg
cgacggcttatccgtggagacgacatggagacgtgtgccacacctgctcacctggccgga
aggtatttctggtcaattcctgaggaggagtttacttgtgagccacctctcatcacccgt
cacacccacaagctgtgggtcctagaaggccagcgagctacactgaagtgccgttccatc
ggcgaccccgagccagtagtacactgggtttcaccagatgaccgcatcattgcaaactca
tcccggaccagctccttcagcaacgggaccttggatatcttagtaacagttgcccgggat
gacggggcatacacatgtattgcaataaatgcagcgggcgaagcaactgccactgtggac
ctcaaaataatccccctgcctcaccggggaggagcaggtggaaacacagggaataacaat
gtaaacaccaagaacaataggaatgtgaccagtgggattttacggaccgatccgggctcc
tcggatatcagcacagggaaaaacggaggaattaataatggtgtaggacgtggaggagag
gtggaggatgggagaagagaaggaggggaggacaatgagggtgacagtggcagagtatct
gaagtggagagggctgatggagggagcatggaggacgacgagggggacaatgaggaaggg
aggatggttggagtacaaggggttacgtcaacctcggctcaggtccgatgggatctgggg
cgtttgtctgcagcttacgttgtctggatgtatcagatacaatacaactgcaccgctgac
gaaaccctcatctacagaatcctaccatccaccagcgaccgtttcctgttgaagaacctg
gtttcgggagtggactataacttgtgcgtgctggccatttttgatgacacaattacatca
ttagcagcaacaaaagtcctgggctgtaccacattctccaccaaggatgtctacccagcg
tgccgctctctccaagcccacttcctgggagggacactcactattttggttggcggcgtt
gttgtggtcaccctactcgtgtttactgtggcgctaatggttcgccaccgagtgtgcaac
catggcgaccacatgatatgtcacaacagcaacactgaggcaggaggcggggcgtgctgt
caaggaggaggtgtaggggctggggacaaaggggggaacagtagtggatgctaccaatca
aatggttcaggggacatgatgatggtggtcttacccaatggtctgcctaccaagagaggt
ggggagaaggacaaggacaaggacaaggacaaggacaaggaaaaggaaaagaagaaggaa
gcagccgattctgcttcctctctgcctccgaaactccctccaaagcccaggcccaaacct
aaagtcaacctggagcagtttctttcagctggaggagtggtttctacaatggcagggaca
ggaggggagatggctttggtggtgagacagagaaagctggagaaggcgccgccatacacc
ccagaaagtgacagaactcccctctactactccccatcccctccatctaccctgccccgt
cagtctcgctccagggaacgcccaagaccccgtctggagcgagaactgaccaatcgtgcc
agtttctctctggctgcacccctgagagactcagatctcttggactggagaatcgctccc
agaggcagagacaaatggaactcttctcaggcttatcagagccctgtatcccctctaaat
cctagctgtgggacggttagtaaacggcgccactcactggatatgggctcctctgtcgcc
ttagcgactgatgcagcagcgactgttgccaagcgctatggtgctgtcagttacgccaag
cggctgagcgtgatctggacgaggcggagccagtcacttcatggaatgctggtgcagtgc
gcatccacgacaagcacaacttcctcgacaaccagtgacgagaccgaaaacggcggtgga
tatggagcccattgtgagttacaacggggatacatccacgcttacaacaccaccaactcc
aactctaacaccggaatcactactgggaagggcagcagtgtaaaagacagggggagggag
aagggaaaggatggaaggagtgctgaagaactggaggaaagtgttgtgtag
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