Scomber japonicus (chub mackerel): 128383387
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Entry
128383387 CDS
T09718
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128383387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
128383387
Domain-containing proteins not elsewhere classified [BR:
sjo04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
128383387
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GFIT
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NCBI-GeneID:
128383387
NCBI-ProteinID:
XP_053198993
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Position
22:12096517..12102835
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AA seq
1461 aa
AA seq
DB search
MVELQVSFSEQTLDGMGCTSLGSAHGVEGEYSNREAIKKLHTATASHYVPCSVREPLSQH
GVVLSSPSMLRQVEVILQQPEASRPGRGILSVGGPWVSGSVGSQSEGEEGGGHCEGAPGT
FSVSFGIPSEEETPAEEQGSESEGDQDKPNKHRAKHARLRRSESLSEKQVKEAKSKCKRI
ALLLTAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDEPEFSDEEDEENQEDREGTHA
VEFTLVASNDSEVDKHFLTNAHSSKGVLTINWDKGLLEIERNLNNKAEMECLPDTKGKGA
VMFAQRRLRMDEISAEHEELRRQGIPVEAIQEAEKKMEHSYMQSTTEDHAYMDVNIHQQS
QHQQQYQQYQEQQYYEQQQQYQQQQQYQQQYQQQQYEQQQYQQQQMYQQQQEYHQEQQQV
QSYSANINGTVHHQTSELQSTFNNRTAKPFSAQNMVVAPYSPAISGTNQDSMGQGEQIAS
RDERISTPASKTGFLQDARRRNVGKPMFTFKEAPKVSPNPELLNLLNRSDKKLGFESGPE
EDYLSLGAEACNFLQPQRVKHKTPPPVAPKPMINPNSPPWSPQGEMTNQDMPQQAENSVS
TPAVAPTAENTPAPELEPTPAPATEPSPPAALQEAPASTTTEEPHTWTVPEPESHQQQVT
AQEENGHINSNPQPESSPVNSWVPAQTQAQQQPSTVSWHPAQVQPQEPHPSQSPPQPARV
AHQPSHTQVQPQPPTNTWTPQIQTSWNQPQEQAQAQTNVQPPWAKPQEQSQAQTHVQPPW
AQPREQLQPQPQVQQPWMQSHEQPHVQQMQPTWGQPQQPMEQQPQAPWAQPSQPDTQHQP
PWVHQPQQKSQVQPPWAQQVQPESQPQPPWVQPTQHQAPQQAWSQAHAPGQVQPPWVSAP
PQSQPQPQPQLQPQPQLQPQPQPQPQPHPHPHPQSQPQPQSQPQQQQQPSINAWPSSQTQ
VQPQPPWIQAAQAQPPTHPAANLNPWAPVPAQAQSQPTWAQHSPEHGQPPMNSWGPEQNQ
AQHHTPWAQSVPPQPTPQQNWQQPISKTPPQSPMNTWPQAQTQPQTPANAWAPQSQQAPV
NVATSMVNTQPSPKPWLPPQNASQNRSPPPPPQRVNSFTVGQRDSSPINPMATVFNPSPS
GSAFEMPAVKGKGADMFAKRQSRMEKFVVDSETVEANKASRSTSPTPSLPNEWKYTPNVR
APPSRAYNPIQSPSYPPAATKQPPPGSPSSKSKKKGKDKQKPAPKPLSVIDVMKHQPYQL
NSSLFTFGPAAEAAKPPVPKPDCSPPHPPIENQPIQYEQMAPIQPAGPFNAPYPQQAYGM
PMQPMVHDGQYQQTPANVYPPSNPYQQPPGGPYQQAYNQQYQQPVPPAYQPQAPQSPNAP
YQLPQVPYQPANSPPYLAAPSVPYQQQQQPPSSYVAPSFPVAARPECASGGNTVAVAAPK
PKFTAKKSSAQVWKPMAVEKE
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaactccaggtgtccttctctgagcaaaccttggacggcatgggctgtacctct
cttgggagtgcccatggagtcgagggagaatactcaaacagagaagcaataaagaaactc
catactgccactgcatctcattatgtgccatgctcagtcagagagccactcagccagcat
ggagtggttctcagctccccttcgatgctgaggcaggtggaggtcattttgcagcagcca
gaagcatcaagaccagggaggggcatcctgagtgtgggtggcccctgggtcagtggaagt
gttggatcccaaagtgaaggagaagaaggaggagggcactgtgagggagctcctgggact
ttcagcgtctcatttggaattccctcagaagaggaaacaccagcagaggagcaaggctca
gaatctgagggggatcaagacaaacccaacaaacaccgggcaaagcacgctaggctcagg
cgtagcgagagtctgtcggagaagcaggtgaaggaggccaagtccaaatgtaaacgtatt
gctcttcttctcactgctgcgccacccaaccccaacaacaagggggtgttgatgttcaag
aaacatcggcaaagggccaagaaatacacacttgtcagctacggcacaggagaggacgaa
ccagagttcagtgacgaagaggacgaggagaaccaagaggacagagaaggaacccatgct
gttgaatttacccttgtggcttcaaacgactctgaagtagataagcatttcctcacaaat
gcccatagcagcaaaggtgtgctaaccatcaactgggacaagggtctccttgagattgag
cggaacctgaacaacaaagcagagatggaatgtttacctgataccaaaggaaagggtgcc
gtaatgtttgctcagcggcgcctaaggatggatgagatttctgctgaacatgaagagctt
agacgccaggggattcctgtggaggcaattcaggaagctgaaaagaaaatggaacactcg
tacatgcagtccacaacagaggatcacgcatacatggatgtgaatatacaccaacaaagc
caacaccaacaacagtaccagcaatatcaagaacagcagtactatgagcaacaacagcag
taccaacagcagcagcaataccaacaacagtatcagcagcagcaatatgaacaacagcag
tatcaacaacagcaaatgtatcaacaacaacaagaatatcatcaagagcaacagcaagtt
cagtcgtattctgcaaacatcaatggcacagtccatcatcaaaccagtgaattacagagt
actttcaacaatcgtactgcaaagcctttttcagcacaaaatatggtggttgccccttat
tctcccgcaataagtggaaccaatcaagattctatgggccaaggagagcagatagcttcc
cgtgatgagcgcatttctacccctgcaagtaagacaggctttttgcaggatgcaagaaga
agaaatgttggcaaacctatgttcacatttaaggaagcaccaaaagtatcacctaaccca
gagttgctgaacctcctcaacaggagtgataagaaactgggttttgagtcaggacctgag
gaagactatcttagccttggggctgaggcttgtaatttcctccagcctcaacgtgttaaa
cacaagactcctccaccagtggctccaaagcctatgatcaatcccaactctcctccttgg
tccccacagggagaaatgaccaaccaggacatgcctcagcaggctgaaaatagtgtatcc
acacctgctgtagcccccaccgcagagaatacccctgctccagaactagagccaacccct
gcacctgccactgagccctctccccctgctgccctgcaggaggctcctgccagcaccact
acagaggaaccacacacatggactgtcccagagcctgaatcccatcagcagcaagtaaca
gctcaggaagaaaatggtcacataaattctaacccacagcctgagagttctcctgtgaat
tcctgggttccagcacaaacacaagcacaacaacagccatccactgtttcatggcatcca
gctcaagtgcagcctcaggagccacatccaagtcagtccccaccgcagccagcaagggtt
gcacatcagccttctcatacccaagtgcagcctcagcccccaacaaacacttggactcct
caaattcagacatcctggaatcagcctcaagagcaagcacaagcccagacaaatgttcaa
ccaccctgggcaaagccacaagagcaatcacaagcccagacacatgttcaaccaccctgg
gcccagccacgagagcaattacagcctcaaccacaggttcagcaaccctggatgcagtct
catgaacagccacacgtacagcaaatgcaaccaacctggggtcaacctcaacaaccaatg
gagcagcaaccccaagccccatgggcacagccatcacaaccagacactcaacatcaacca
ccatgggtgcatcaaccacaacaaaaatcccaagtgcaacctccttgggctcaacaagtt
cagccggaaagccagccacaaccaccatgggttcagccaacacagcatcaggccccacaa
caggcatggtcacaggcccatgcaccaggtcaggttcaaccaccgtgggtctcggctcca
cctcagtctcagcctcagcctcagcctcagcttcagcctcagcctcagcttcagcctcag
cctcagcctcagcctcagccacatcctcatcctcatcctcagtctcagcctcagcctcag
tctcagcctcagcagcaacagcaaccttcaattaatgcatggccttcatcacaaactcaa
gttcaacctcagcccccttggatccaagcagcccaagcacaacctccaacacaccctgca
gccaatttaaatccatgggcaccagtacctgcccaggctcagtctcaaccaacatgggcc
caacattctccagaacatggacagccgcccatgaattcctggggaccagagcaaaatcag
gcacaacatcacacaccatgggctcaatcagttcctccacagcccacaccacaacaaaat
tggcaacagccgatttcaaagactccaccacagtcaccgatgaatacctggcctcaagct
cagacacaacctcagacacctgcgaacgcttgggcaccacagtcacagcaagcacctgtg
aatgttgcaacatcaatggtaaacactcaaccctctccaaaaccttggcttccacctcaa
aacgcttcacaaaaccggagcccaccaccgccaccacagcgagtcaattcttttacagtt
ggccaaagagattcgtcacctatcaaccccatggccactgtctttaacccatcgccctct
ggttcagcttttgagatgccagcagtcaaaggaaaaggagcagatatgtttgccaagagg
cagtctcgtatggagaagtttgttgtggactctgagactgtggaagcaaacaaggcaagc
cgatcaacatccccaactccctccttaccaaatgagtggaaatatactcccaatgtacgt
gctccaccttcacgggcttataatcctattcagtccccttcttatcccccagcagcaaca
aaacagccccctccaggtagtccttcaagcaaatccaagaaaaaaggcaaagataaacaa
aagcctgcccccaaacccctcagtgttatagacgtcatgaagcatcaaccctatcagctc
aattcttcactatttacctttggcccggcagcagaggctgccaagccccctgtacctaaa
cctgactgttcacctcctcacccacctattgaaaaccaaccaattcaatatgagcaaatg
gcccccatccagccagctggaccatttaatgccccatatccccagcaggcctacgggatg
cccatgcaacctatggtgcatgatggccaataccagcaaactccagctaatgtttatcct
ccctccaatccttatcagcaacctcctggtggtccataccagcaagcatataaccaacaa
tatcaacaacctgtcccacctgcttaccaaccccaagcgcctcagtctccaaacgctccc
taccagttaccccaggtcccctaccaaccagccaatagtcccccctacctggcagctccc
tcagtaccttaccagcagcagcagcagccccccagtagctatgttgctcctagtttccct
gtagctgcaaggcctgaatgtgcatcaggtggcaacactgtagctgtagctgctccaaaa
cctaagtttacagctaaaaagagctcagctcaggtgtggaagcctatggcagttgagaaa
gagtaa
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integrated database retrieval system