Scomber japonicus (chub mackerel): 128383389
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Entry
128383389 CDS
T09718
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjo03000
]
128383389 (sox19b)
Transcription factors [BR:
sjo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128383389 (sox19b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
128383389
NCBI-ProteinID:
XP_053198994
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All DBs
Position
22:2537538..2542130
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AA seq
308 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGNLGTNGNSHPSSKTALAPGGDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPLLKKDTQVGKYPLSAGNLLAAAAAQGQSGSPRMESYGWGPTGGY
AGMQGEALGYTQQLHRYDLSALQYPPAMTAAQTYMNGGNSYSPMSYSSSPQQPSPVTMSM
VKAEPMSHSPPTGTPNHHRGPLQGDLRDMISMYIPGPGGDAGDPTAAQRGYSSVQQHYLT
GTVPLTHI
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgaactgaagccgaccggccagcccccgtctcatcagacc
tcccaaggaatgtcaccggtcaccggtaacatgaccgggaacttgggcaccaacggcaac
tcacacccgagctctaaaacggcattagcacctggaggcgaccccatggataaagtcaag
cggcccatgaacgctttcatggtctggtccaggggacagaggcgcaagatggctcaagag
aaccccaaaatgcacaactctgagatcagcaagcggctgggagcagagtggaaactcctg
accgacgccgagaaaaggccatttatcgacgaggccaagcggctccgggccgtccacatg
aaggagtaccctgattacaagtacaagccacgccgcaagacaaagccactgctgaagaag
gacactcaggtgggtaagtacccgctgtcagccggaaacttgctggcggctgcggctgcg
caaggccaaagtggaagtccgaggatggagagctacggctggggtcccaccggggggtac
gccggtatgcagggcgaggcgctcggctacacacagcaacttcaccgatatgacctgtca
gctcttcagtacccacctgcaatgacggcagcacagacgtacatgaacggaggcaactcg
tacagcccaatgtcatacagcagcagtccccagcagccgagccctgtaaccatgtccatg
gtgaaagcagaacccatgtcccactcacctccgacggggacaccaaaccaccataggggt
cctctgcagggtgacctcagggacatgattagcatgtacatcccaggaccaggaggggat
gccggtgaccccacagcagcacagaggggctacagcagtgtccagcagcactaccttacc
ggaaccgtcccactcacacacatctag
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integrated database retrieval system
