Scomber japonicus (chub mackerel): 128383507
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Entry
128383507 CDS
T09718
Name
(RefSeq) basement membrane-specific heparan sulfate proteoglycan core protein-like
KO
K06727
Fc receptor-like protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128383507
CD molecules [BR:
sjo04090
]
Proteins
128383507
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_4
Ig_5
Adeno_E3_CR2
Syndecan
CD34_antigen
EpoR_lig-bind
Motif
Other DBs
NCBI-GeneID:
128383507
NCBI-ProteinID:
XP_053199094
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All DBs
Position
22:complement(18070069..18078552)
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AA seq
912 aa
AA seq
DB search
MNTLCYGQYEANKPKLTADKTIIPVGGSVTLTCSVYGFADWEYEWFRQYDWLLYRQTSES
SAPQLISVNEGGIYFCRGGRDSIFYTEDSNKVTIQETVSNKAVVTLQPNWSLIYSGETIT
VRCEIEGGGNTGWEYEWRENDVVSPQKDKEFRISASSSSNINFMCKGRRDLYSSTEWSEA
VTLRSLNKAKSKLTPDRSIIPVGGSVTLTCSVDSSADWKYYWSRRDSGSSALQSITNVKP
VHKVSEGGIYQCGAGRGNPEIFTEFSRTVTVWKTVPNKAVVTLQPNWSQIYSGETVTIRC
EIQGGGDTKWMYEWTPANLNTSPTLSEHKISSTDYYSRGYSCRGLKDSYSSTEWSNVFRL
TVSSNKPKAKLRADNRDIPVGGSVTLTCSVDSSSSGWKYYWYRGEKTSEPLTTQDAVFQS
NGQISVSQGGSYWCRGGRGDPVYLTEYSDSIRINNIVPNKAVVTLQPNWTEIYRGETIML
RCEIHDGDKEWEYEWKSPRYTSTNNNEYRISYASSYHSGNYKCRGRMKNAEHISTEWSAN
ITLTVSDNEPASVLTVSPLWLSPGDSVTLSCEVEHPSAGWRFYWYKTVPKLSEYSYINEL
LPGSINGTEQDSYIIHGPTHTAGYMCRAGRGDPVYYTQYSKPGFVWSGDVHSAVTLKVSP
DRVQHFTSDSVSLSCEGNFTKWRVRRFPVGYSYCYYWRSMTGSTCNISSSKQSDAVYWCE
SGSGEFSNAVNITIQNADIILVSPVHPVTEGQSVTLGCKLRTGELLSNVFFYQNDKLIQN
DTRRELNISAVSKSDEGFYKCKYSGEESAQSWMSVQAVSRPENSSSLITLIVGLVCGVVF
IILLILLYLYSRSRDSHSVRPIQSESTNQDSATHHMVNLNETQDHIYNSLLHGDVCVYES
IRGSEDPENGKV
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatacactctgctacggacaatatgaagcaaataaacccaaactgacagcagacaaa
accatcataccagtaggaggcagtgtgacactgacctgctctgtgtacggttttgctgac
tgggaatacgaatggttcagacaatacgactggttattgtacagacaaacctctgagtct
tctgcacctcaactcataagtgttaatgaaggaggcatctacttctgcagaggaggaaga
gactcaatcttctacacagaggacagcaacaaagttactattcaggaaactgtttccaac
aaggctgttgtgactctgcaacccaactggtctctgatatacagtggtgagacaatcact
gtcagatgtgagatagagggaggtggaaacactggatgggaatatgaatggagagaaaac
gatgtggtctcacctcagaaagacaaagaattcagaatcagtgcttcttcatccagtaat
ataaacttcatgtgtaagggtagaagagatttatattcctcgacagagtggagtgaagcc
gtcacactgagatcattgaataaagccaagtcgaaactgacaccagacagatccatcata
ccagtaggaggcagtgtgacactgacctgctctgtggactcctctgctgactggaaatac
tactggtctagacgtgactcaggttcttctgctcttcagtccataacaaatgttaaacca
gttcacaaggtctcagaaggaggcatctatcagtgcggagcaggaagaggaaacccagag
atcttcacagagttcagcagaacagtcactgtttggaaaactgtcccaaataaggcagtt
gtgactctgcaacccaactggtctcagatatacagcggagagacagtcaccatcagatgt
gagatccagggaggtggagacactaagtggatgtatgaatggacaccagccaacttaaac
acatctccaacactcagtgaacacaagattagcagcactgattactacagtagaggatac
agttgtagaggactgaaggactcatattcctctacagagtggagtaatgtcttcagactg
acagtatcatcaaataaaccaaaggccaaactgagagctgacaacagagatattccagta
gggggcagtgtgaccctgacctgctctgtggactcatcatcatctggttggaaatactac
tggtacagaggagagaaaacctctgaacccctgaccacacaagatgctgttttccaatca
aatggacaaatcagcgtctcacagggaggatcctactggtgcagaggagggagaggagac
ccagtttacctcacagagtacagtgattcaatcaggatcaacaatattgtcccaaataag
gctgttgtgactctgcaacccaactggactgagatatacagaggagagacgatcatgctg
agatgtgagatccacgacggagacaaagagtgggagtatgaatggaagagtccccgttac
acatctacaaataacaatgaatacaggattagctatgcttcttcataccacagtggaaac
tacaagtgtagaggcagaatgaaaaatgcagaacatatttcaacagagtggagtgctaac
atcacattgacagtatctgataatgaaccagcatctgtcctcactgtgtctccattatgg
ctgagtcctggagactcagtaactctgagctgtgaggttgaacatccatctgcaggatgg
aggttttactggtataagactgttcccaaactatcagagtattcctacatcaatgagctg
ctacctggtagcatcaatgggactgaacaggattcctacatcattcatggaccgacacac
acagcaggatatatgtgtagagctggaagaggagacccagtgtattacactcaatacagc
aaacctgggtttgtttggtctggagatgttcattcagcagtgactctcaaagtgagtcct
gacagagtgcagcacttcacctctgactctgtctcactgagctgtgaaggaaactttact
aagtggagagtgaggaggtttcctgtgggctactcatactgttattactggaggtccatg
actggatccacatgcaacatcagcagttcaaagcagagtgatgcagtgtactggtgtgag
tctggatcaggagagttcagcaatgccgtcaacatcactatacagaatgcagatattatc
ctggtgagccctgtgcatcctgtgactgagggacagtctgttactcttggctgcaaactg
aggacaggagaattactttccaacgtgtttttctatcaaaatgacaaacttatccaaaat
gataccagaagagagttgaatatctctgcagtgtcaaagtcagacgaaggtttctacaag
tgtaaatactcaggagaagaatcagcacagagttggatgtcagttcaggcagtgtccaga
cctgaaaactcttcatctcttattacattaattgttgggctggtttgtggagttgtattt
attattctcctgatcctgttgtatctctacagtcgatccagagattctcactctgtcaga
ccaatccagtctgagagcaccaatcaggactctgctacacatcacatggtcaacctgaat
gaaactcaagatcacatctacaattctcttctccacggtgatgtttgtgtctatgaatca
atcagaggctctgaagaccctgaaaacggtaaagtataa
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