Scomber japonicus (chub mackerel): 128383530
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Entry
128383530 CDS
T09718
Symbol
si:cabz01101003.1
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo04217
Necroptosis
sjo04622
RIG-I-like receptor signaling pathway
sjo04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
128383530 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
128383530 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
128383530 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sjo01002
]
128383530 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sjo04121
]
128383530 (si:cabz01101003.1)
Enzymes [BR:
sjo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128383530 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
sjo01002
]
Cysteine peptidases
Family C67
128383530 (si:cabz01101003.1)
Ubiquitin system [BR:
sjo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128383530 (si:cabz01101003.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
128383530
NCBI-ProteinID:
XP_053199114
LinkDB
All DBs
Position
22:complement(19735379..19749301)
Genome browser
AA seq
939 aa
AA seq
DB search
MSGAHEQSRKRRPPKMYLISSDLKVQDQLDGTIRLQRGNICQEQDHAKGRGDHPWFKVLD
NGIMLKIERKFLLEVPTELVGLLEAVTDPEARYKLLSNPGKLQTLATLPVGAPLWVQIGQ
TDELAEAELRFIGALTRGSSAVFFGVQLKGSAAGRGSSNGSFKGNRLFSCPEACALFVPV
SHIRQRHWRSNGSDAHERPRERDQQHHQHHHPQQHHRISTGNNNQPSNGHHGNSDRLIHH
QQQQHSRHISYLQHHPVSPSFGILPRTAESAPISAQNQPQLRGPPSPLPFHLGDRVCFPL
EDTVERGEVRFCGFLPGRSSSGVYVGVQLDNPVGRWDGIYKGEKLCHFPSPHYGALLPVN
NVSSEPKSLRHNPPSQIPKSILKPLTPPASKPGPTSPPAVKVALQPPPKQPLKPPPLPPP
KPNLKPLPLPPLPPPKPQTPTSPAAVDQLQHTNGVLGPPSPLRSPDYIDDAAENGEAGME
SELEVGSMVEVNDPPLFGVIRWIGRIGGILEPVAGIELDQELSAGTDGSYLGERHFRCPA
NKGLFVKLRNCRRDSRFPAPETPVNQVERCNSIAFAEWGSERVEEHTPPVDGDEAKQLYQ
GRKRGIQGHLNSCYLDATLFSLFSCCSSADWTLFWPSDPETDQRSSQAQDLLRCEIVNPL
RRFGYVCASKTMALRRLLEAANSDTGFTNQEKDPEEFLNKLFQLLRVEPLLKIRSMTHQP
QECHLYQLFPPSLPPSPSSPDLISPVDSSSIPLSPLPSSRMRVASVQTLLESSFLHAGLK
FVEAPSSLLLLMPRFGKDFKMFDAILPTLSPQSQKRTSHSPVKIGIPDGPWSGPLHCARQ
QMSLFAVTCIETSHYVSFVKNGPLPTDWLFFDSMADREGGENGFNIPQVKPCPEVGRYLS
LSEEELGRIDPASLRESARRLLCDSYMCLYHSPELSLYK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagcccatgaacagagcaggaagcgccgacccccgaaaatgtacttgatctcg
tccgacctgaaggtgcaggaccagctggacggtaccattcggctgcagcgggggaacatc
tgtcaggagcaggatcacgctaagggcagaggtgaccacccctggttcaaggtgttagac
aatggcatcatgttgaaaatagagaggaagttcctgctcgaagtcccgaccgagctggtc
ggcctgctggaggccgtgactgacccggaggctcgttacaaattactgagcaatcccggg
aagctgcagactttggctacgcttcctgtcggtgccccgttgtgggtccaaatcggccag
acggacgagctggcagaggcagagctcagattcatcggggcgctgaccagagggagcagc
gccgtgttctttggggttcaactcaaaggctcggctgcaggtcgaggctccagtaacggt
tcctttaagggtaacagattgttcagctgccctgaagcctgcgccctcttcgtccccgtc
agccacatcagacaacgccactggaggagcaacggttcagacgcacacgaaagaccccgc
gagcgagaccaacaacaccatcaacaccaccatccccagcagcaccaccgcatcagcacc
ggcaacaacaatcaacctagcaacgggcaccacggcaacagcgaccgcctgattcatcac
cagcagcagcagcacagtcgtcacatcagctacctgcagcatcaccccgtcagcccttct
ttcgggatcctcccccggaccgccgagtcggcccccatctcggctcagaaccagccgcag
ttacgaggcccgccgtcgccgctgccgttccacctcggcgatcgggtgtgcttccccctg
gaggacaccgtggagaggggcgaggtgcgcttctgtggctttttgcccggcaggtcctcg
tcgggggtttacgtcggagtccagctggacaaccccgttggtcgttgggacgggatttat
aaaggagagaagctctgccacttcccttcccctcactacggagccctgctgccagtaaac
aacgtttcatccgagccaaaatccctccgtcacaaccctccttcccaaattcccaaatcc
atcctgaagcctctgacgcctcccgcctctaaaccagggccgacatcgccgcctgccgtc
aaggtcgccctgcagccgccccccaaacaaccactcaaacctcctccgctgccgccgccg
aagcccaacctcaagccgctgcccctccccccgctcccgcctcccaaacctcaaaccccg
acgtcaccggccgccgtagaccagctgcagcacaccaacggcgtgctcggtccgccctcg
ccgctgaggtcgccggattacatcgacgatgcagcggagaacggggaggcagggatggag
agcgagctggaggtggggtccatggtggaggtgaacgacccgccgctcttcggggtgatt
cgctggatcggacggatcggtgggattttagagccggtggccgggatcgagctggaccag
gagctgtctgcaggtacagacggcagttacctcggcgagcgccacttccgttgcccggcc
aacaaaggactcttcgtaaagcttcgcaactgcagacgagactcccggttccccgctcct
gagacgcccgtgaatcaagtggagcggtgcaactcgatagcttttgcagagtggggcagc
gagcgcgtggaggagcacacaccacctgtggacggagacgaggccaagcagctctaccag
ggccgcaagaggggcatccagggtcacctcaactcctgctacctggacgctacgctgttc
agtctgttctcttgctgcagttcagcagactggacgttattttggccgtccgaccccgaa
accgaccagagatccagtcaggctcaggacctgctgcgatgtgagatagttaaccctcta
cgcaggtttggctacgtgtgtgccagtaagacgatggccttgagacgacttctggaggcc
gcgaatagtgacacgggcttcaccaatcaggagaaagatcctgaagaattcctcaacaag
cttttccagctgctccgagtcgagccgctcctcaagatcagatcgatgactcaccagcct
caggagtgtcacctctaccagctcttccctccctcccttcctccgtccccttcctccccg
gacctcatctctccggtcgactcctcctccatccctctgtctccgctgccctccagtcgg
atgagagtcgccagcgtccagactctgctggagtcgtccttcctccacgccggcctcaag
tttgtcgaagccccctcctcgctcctgctgctcatgcccaggtttgggaaagactttaaa
atgtttgacgccatcctgccgacgctcagtccacagtcacagaagcgaacctctcacagc
ccggtgaagatcggcattcctgacggtccgtggtccggcccgctgcactgcgcccgccag
cagatgtctctcttcgccgtgacgtgcatcgagacgagccactacgtcagcttcgtgaag
aacggacccctccccaccgactggctgttcttcgacagcatggcggaccgagaaggtggc
gagaacggcttcaacatcccgcaggtgaagccgtgtccggaggtcggtcgctacctcagc
ctgtcggaggaggagctgggcaggatcgaccccgcctcgctgcgggagtcagcccgccgc
ctgctctgcgactcctacatgtgtctgtaccacagccccgagctcagcctgtacaagtga
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