Scomber japonicus (chub mackerel): 128383727
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Entry
128383727 CDS
T09718
Symbol
cd248a
Name
(RefSeq) CD248 molecule, endosialin a
KO
K06706
CD248 antigen, endosialin
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sjo04090
]
128383727 (cd248a)
04091 Lectins [BR:
sjo04091
]
128383727 (cd248a)
CD molecules [BR:
sjo04090
]
Proteins
128383727 (cd248a)
Lectins [BR:
sjo04091
]
C-Type lectins
Others
128383727 (cd248a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
Lectin_C
EGF
EGF_3
hEGF
KIAA1549
Motif
Other DBs
NCBI-GeneID:
128383727
NCBI-ProteinID:
XP_053199293
LinkDB
All DBs
Position
22:complement(3583357..3586472)
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AA seq
749 aa
AA seq
DB search
MGTLVSSAAALLLTSLLALLFGVSSILGQDLTERDALCNADGCFVVYFQRKSFLDSWKAC
KDKGGNLATIKRRQDENTISTLFSSLDLRHSRTKVQVWIGLLRQPRQCTSRPLRGFSWTT
GDQDTEYTNWQKEDSPVCLASRCVVIGYNIQEQSDNFKWLDGSCSVPVDGYLCHYDYKGM
CPALWSEGAGNALYSTPFGLLSTLLSHVPFGSVATVPCPTDTKEEQSVLCTQREDGSVGW
SRDSPLCSNPPPSNNWCDQNNGGCEHFCRLSGAHSYCECADGYQLRDDGQTCELSDVCQG
APCEFECLPLSDRYRCACPEGYMLAPDEHGCVDVDECLQSPCEQVCVNAPGSFDCRCREG
YHLDDEGGCEDIDECNNNPCEHECENTVGSHICHCHMGFSLLPEDPSRCQDTDECQIPGT
CEQMCVNYDGGFECFCEVGYALLNDHSSCQKIGEGDDQSAATPPFPWVTDQPGWNGADYW
NQQQSHTDWPPEVDPSLDWLTDPPRVLDSGVIWVTSAPQDDLPFEGADWSHWGQGSQSEL
EVWPSTISTTPPPTTSSSTTADWYEDEEEETTTAFPLLPTSTISGGAWYWWARHTTASQK
PENPDDAVTDHYMPTESSYHSEAEEEKYPLRENVQFPEEEKKDSVESTIYQDPAVSTQLT
PSQPAPSQGDIDPVQEDRGQKQSNTWLLVGLLVPICIFIVVMVALGIVYCSRCAVQPRNK
NATDCYHWISGAHDKQGAPNPSAGVKTHV
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccctggtgagcagtgctgctgctctgctcttaacctcccttttggctttgctc
tttggagtttcttcaatcctgggccaggacctgacagagagggatgcactatgcaatgca
gatggctgcttcgtggtctacttccaacgcaagtctttcctggactcatggaaggcctgc
aaggacaaaggtggtaacctggctaccatcaaacgcaggcaggatgaaaacactatttcc
actctcttctcctctctagacttacgccactcacgcactaaggtccaggtatggatcggc
ctgctgcggcagcctcgccagtgcaccagtcgcccacttcggggtttctcttggactact
ggtgaccaggacacagagtatactaactggcagaaagaggactcccctgtgtgcttagca
tcacgctgtgtagttattggctacaacattcaagagcagagtgataactttaaatggctg
gatggttcctgctcagtccctgtagatgggtatctttgccattatgactacaaaggaatg
tgtcctgcgttgtggagtgaaggggcaggcaatgccctctactccacaccatttggcctt
ttaagcacgcttctaagccatgtaccctttggatctgttgctaccgtgccctgccccaca
gacacaaaggaggaacagtcagttctgtgtacgcagagggaagacggctcagtggggtgg
tcaagagattcccccctctgctccaatccccctccatcaaataactggtgtgatcagaat
aacggtggatgtgaacatttctgcaggctgtccggcgctcactcctactgcgagtgtgcc
gacggttatcaactcagagacgatgggcagacctgtgagctgtctgatgtttgtcaagga
gccccctgcgaatttgagtgcctgcccctttcagataggtaccgttgtgcctgtcctgaa
ggatacatgcttgcaccagatgaacatggctgtgtggatgtagatgagtgccttcagagt
ccctgtgagcaggtatgtgtgaatgctccagggtcgtttgattgtcgatgtcgggagggt
taccatcttgatgatgaaggtgggtgcgaggacatagatgagtgtaacaataacccatgt
gaacatgaatgtgagaacactgtaggttctcatatctgccactgccatatgggtttttcc
ctgctgcctgaggaccccagtcgatgccaagacactgacgagtgccagattcccgggacc
tgcgagcagatgtgtgtgaattatgacggtggatttgagtgcttctgcgaggtaggctat
gcactcttgaatgatcactcttcatgtcagaagattggagaaggagatgaccaatctgct
gccacgcctccttttccttgggtcactgaccagcctggatggaacggtgcggactattgg
aaccaacagcagtcccacactgactggcctccagaggtggatccatctctggactggttg
acagacccacccagagttttggactctggcgtaatttgggtcactagtgcccctcaggac
gatctgccatttgaaggagctgactggtcacactgggggcagggatcccagtctgagctg
gaagtttggccatccaccatctccactacacccccacccaccaccagctccagtactacc
gcggactggtatgaagatgaagaagaggagaccaccacagctttccctttacttcctacc
tctacaatctctgggggagcatggtattggtgggctcggcatactactgccagccagaaa
ccagaaaatcccgatgatgcagttacagaccactacatgcctactgagtctagctaccac
agtgaggcagaggaggaaaagtacccccttagggaaaatgttcaattcccagaggaggag
aaaaaggacagtgtggagagcaccatttaccaagacccagctgtttccacccagcttact
ccatcccagccagccccaagccagggtgacatcgatcctgttcaggaggacaggggacag
aaacagagcaacacctggctcctggtgggcctcttggtgcccatctgcattttcattgtg
gtgatggtggcactgggcattgtctactgcagccggtgtgctgttcagccacgcaacaag
aatgctactgactgctaccactggatctctggagctcatgataaacagggagctcctaac
ccctcagcaggggtcaagacccatgtttaa
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