Scomber japonicus (chub mackerel): 128383736
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Entry
128383736 CDS
T09718
Symbol
kirrel1a
Name
(RefSeq) kin of IRRE-like protein 1a
KO
K25874
Kirrel/Neph family protein
Organism
sjo
Scomber japonicus (chub mackerel)
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sjo04515
]
128383736 (kirrel1a)
Cell adhesion molecules [BR:
sjo04515
]
Immunoglobulin superfamily
Kirrel/Neph family
128383736 (kirrel1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_5
Ig_4
Syndecan
DUF347
Motif
Other DBs
NCBI-GeneID:
128383736
NCBI-ProteinID:
XP_053199302
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Position
22:complement(7262144..7293716)
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AA seq
851 aa
AA seq
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MQRLLLLSLLLSFQTVWTARFSQEPADQSVVRGQRVILSCVVFNYSGIVQWTKDGLALGI
GEDLRAWPRYRVLRVQELGQYNLEILSADLSDDSLYECQAPDAALRSRRAKLTVLIPPDD
PVIDGGPEVLLNAGESYNLSCVSRGAKPPSMIEWLKDGLPVDGAVSGTEVLQDRKRVTTR
SYLPIHPIDTDTGRNYSCVATNLAVPTGKSTTVTLNVHHQPTVTLSIEPRSVLEGDRVTF
TCQAHANPPIMGYRWAKGGVVLQGARESVFTTKADHSFFTEPVSCLVFNAVGKTNVSILV
DVHFGPILLVDSQPKTVDVDSDVTLNCKWAGNPPLTLTWFKKGSNMVLSNSNQLYLKSVS
QADAGQYVCKAIVPRIGVGQTEVTLTVNGPPIISSEPVQYAVRGERGEVKCYIASTPPPD
KIVWAWKENVWEKEKGTLLERYTVEQSKPSAEGGGVLSTLTINNVMESDFLSTYNCTAWN
AFGPGTMIITLEETEEVPVGIIAGGTVGSTILLFIFLLVLVLIFYRQRKGSRRGVTLGKP
DIKVETINKETHSLEEDSGSVSTASRMVKAMYSFLPSVSFSPSNQPFKDDIELKSDLRSD
TLDTRQEYDLKDPTNGYYNVRASTHDEGRPASRSTMHYSDYRSPTGTPGGAASISSSAGG
SGATASGGAPGPPGPLTSPGRPQACYDPRPPSRLSHISYAQFNTFTRGGQSQQPPPNPPP
AASDFPGDCSLLDSTSQLAYDNYGYPSHYQTYRMGFAPSSLAPLEAGPSYEMYGVGSGVG
GPGVGVGPGVGPGVGPGVGPGVGPGVGPGGPPPSGSETGLGKYGSSTRFSYTSQHSDYSH
SRHTQRMQTHV
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctgctgctcctgagtttgctgttgagttttcaaactgtgtggacagcgagg
ttctctcaggagccggcagaccagtcggtggtgcggggccagagggtgatcctgtcctgc
gttgtcttcaactactcgggtattgttcagtggaccaaagatggcctggctctgggcatc
ggagaggacctgcgggcctggcccaggtaccgtgtgttgcgtgtccaagagctgggccag
tacaacctggagatcctgtcagctgatctgtctgatgactccctgtacgagtgccaggcc
cctgatgccgccctgaggtccaggagggccaagctcaccgtcctcatccccccagacgac
ccggtgatcgatgggggtccggaggtgttgctgaatgcgggggaatcctacaacctcagc
tgcgtgtcccgaggggctaaaccaccttcgatgattgagtggcttaaagatggcctgcct
gtggacggggctgtcagtggcactgaggtgctccaagacaggaagagggtgaccacacgc
agctacctgcccatccatcccattgacactgacactgggaggaactacagctgtgtggcc
accaacctggctgtccccactggcaaaagcacaactgtgaccctcaacgtgcaccatcaa
ccaacagtgaccttgtccattgagcctcgctctgtcctggagggggacagagtcaccttc
acctgccaagctcacgccaaccctcctattatgggctacaggtgggctaaaggtggtgtg
gtgctgcagggtgccagggagagcgtgttcaccaccaaggccgaccactccttcttcacc
gagcccgtctcttgtctggttttcaacgccgtgggaaagaccaacgtcagcatccttgtg
gacgttcacttcggtccaatcctgttggtggattctcagccaaaaaccgtagatgttgac
tctgatgtcacccttaactgcaaatgggctggaaaccctccactcacgctcacctggttc
aaaaaaggttcaaacatggttctgagtaacagcaaccagctgtatctgaagtcagtgagc
caggcggatgccggccagtatgtatgtaaggccatcgtcccacggattggagtaggacag
actgaggtcacgctcactgtcaacggtcctcctatcatctccagtgagccggtccagtat
gcagtgagaggagagaggggagaggtgaaatgctacattgcaagtacacctcctccagat
aagattgtgtgggcgtggaaggagaacgtgtgggagaaggagaaggggacgctgctggag
aggtacacagtggagcagagcaaaccgtcggccgagggcggcggcgtcctctcgaccctc
accatcaacaacgtgatggagtccgacttcctgtccacctacaactgcacggcctggaat
gcgttcgggcccggcaccatgatcatcaccctggaggagactgaggaagtcccagtgggg
ataatagctggtgggacggtgggctcaaccatcctcctgttcatctttctgctggtcctc
gttcttatcttctaccgacagcgcaaaggcagtcggcgcggggtcacgctgggtaagccc
gacatcaaggtggagacgataaacaaggagacccacagcttagaggaggactccggcagc
gtgtccacggcttcgcgcatggttaaggccatgtactcgtttctcccctctgtgtccttc
tctccctccaatcagccctttaaggatgacatagagctcaagtccgacctccgcagcgac
accctggacacccgccaggagtatgatctaaaggaccccactaatggctactacaatgtc
cgagcctccacccacgacgaaggccgccccgcctcccgctccaccatgcactactccgac
taccggtcccccactgggacaccagggggagctgcatcaatcagcagcagtgccggcgga
tcgggagccacggctagcggaggagcgcccggtccaccaggcccccttacctcccccggc
cgtccgcaagcctgctacgaccctcgacccccgtccagactctcccacatcagctacgcc
cagttcaacaccttcactcgtgggggccagagccaacagcctccgcccaaccctccccca
gcagccagcgacttcccaggagactgcagcctcctggactccacttcccagctggcctac
gacaactatggatacccctcccattaccagacctaccgtatgggtttcgccccgtccagc
ctggccccgctggaggccggcccctcttatgagatgtacggggtgggatccggggtagga
ggccctggggtaggggtgggtcccggggtgggtcccggggtgggtcccggagtgggtccc
ggggtgggtcccggagtgggtcccggaggtccgcctccttcgggatcagagactggacta
gggaagtacggcagctccactcgcttctcctacacctcgcaacactctgactactcccac
agccgacacacacagaggatgcagactcacgtgtga
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