Scomber japonicus (chub mackerel): 128384015
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Entry
128384015 CDS
T09718
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sjo
Scomber japonicus (chub mackerel)
Pathway
sjo03013
Nucleocytoplasmic transport
sjo03015
mRNA surveillance pathway
sjo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128384015 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
128384015 (acin1b)
03015 mRNA surveillance pathway
128384015 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjo03019
]
128384015 (acin1b)
03041 Spliceosome [BR:
sjo03041
]
128384015 (acin1b)
Messenger RNA biogenesis [BR:
sjo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
128384015 (acin1b)
Spliceosome [BR:
sjo03041
]
Complex C
Other components
EJC/TREX
128384015 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
128384015
NCBI-ProteinID:
XP_053199571
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All DBs
Position
22:complement(17130405..17153265)
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AA seq
1188 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKTALEQRNLPKSGQKNTLIKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQEEEADESPAVPEEDEDHSEDN
ESASYPDKHHPKISQPPLTRTEERGGGSMMGHGKMASGPDVGPAPTTQRASFHQGHKEPP
APSPPRAVASLSVRVLGQPDRQGLPPAVSRAQEKEGTAPSEPGSAHPVLHLSRSAGVVSG
GRVQEDSNEDDDGDDESEDDDDWGPGPGPGGSRRGNRVPPPPQQMPPSGPAASARSKRKL
QPPQHIPPPQVLETPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDNQEGEDPRAAAVPPST
MQRQDSESSSGSSSPEPPVKRRPGPLSLLVHKMESEGAFRAGETTSAVTVSGEAAHSSTG
SVISVAATRPTESQLQILERKKQQENKELEEERRLAEKRERERQKEQEEERKKEEREREK
KRLEEEKEKERKRLEEEEERRKKRQLEEEREKRQQAANRELMAKTKAQDSGSSSDSDSKS
DSSSRSSQSSSSAGEKPRPARQLKKTDQGREPDDEKKTKLSKGAEKEHLKKSEVSEPSAA
AVTEVEPDSEGSMAQQPASGAEPDNNSNEGRLEESTTPKAFAARKISLTSSKTSPATTEG
GAGESETATAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKVSQEAVVELHPEELQ
LSGDEENLDANRGDQDKGLKIRRTVTQVVAGGDGQENGQANEEEEVEKTEREKQRRTSKD
KRKNSVSEEAPETQMSIKVEGEAKKVTPSDSLVRRSISQQKSGVSVTIDDPVRTNKQPSP
PRGKVSNIIHVTNLVRPFTLGQLKELLNQTGSMVEDGFWIDKIKSHCFVTYATTEEAVST
RAALHGVKWPQSNPKVLNVDFCEQEEVDFHKGILKPVKEEDHVPQPGVPQNRLPPLMPER
DRERERDRVVDRERDRERDRGVVGVRDLWAEREREMERRERARGEREWDRDKVREFARPG
EEERRSRSRDRERRRRERGKSKERKTDKKEKGDEPPAKLLDDLFLKTKAAPCIYWLPLTE
EQAAQRVLDRTERQKERERRRKEQQEEEKKREEEKREERLKTREKEGGVTASSGGAGRGA
DGDRERERGRDREADKRRDGGHRPRRPSTGAGSGRRSRSRSNPRDRRR
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatggaaaacctctacaatcgctccgagtcgcggat
ttaaaaaccgccttggagcaaagaaacctgccgaaaagcgggcagaaaaacacactcatt
aagcgactgaaaggggctctgatgcttgaaaacctgcagaagtcgtcctcctctcacagt
gggctgcagcccaactctcagataggggaggagatgagccagaatagcttcataaaacag
tacctggccaagcagcaggagctccttcgacagagacttgagagagaggcccagcaagag
gaagaggctgatgaaagcccagcagtgccggaagaggatgaagatcactcagaggacaat
gagagcgcttcttatcctgacaagcatcatcccaaaatctctcagcccccactcaccagg
acggaggagaggggaggaggatcaatgatgggtcatgggaagatggcaagtgggcctgat
gtgggtcctgctccaaccacgcagcgagcctcctttcatcaaggacacaaggagccaccg
gccccgtctcctccccgcgccgtagcctccctgtcagtgcgcgtcctgggccagccggac
cgccaggggctgccccctgccgtgtcccgagcccaagagaaggagggcaccgcacccagt
gaacccggctcagcccatcctgtcctccacctcagccgatcagccggcgtcgtatcagga
ggtcgtgtccaggaggacagcaatgaagatgacgacggtgatgacgagagcgaggatgat
gatgattgggggcctggtcccggtcccggcgggtcacgaagaggcaacagagttcctcca
ccaccgcaacagatgccccctagtggcccagcggcaagcgcaagatccaaacgcaagctt
cagcctccgcagcacatcccaccaccgcaggtactcgagaccccgatgcagctgcgccac
cccactcctcctccctctccaccacccaacctgttccccctccccgacactcccaagcag
agccccccagacaaccaggagggagaagacccaagggctgcagctgtcccaccttccacc
atgcagaggcaggactctgaatccagctccggttccagcagtcctgagccccctgtgaag
cgcagaccaggacccctttctctgctggtccacaagatggaatcagagggggctttccgg
gcaggcgagaccacctcagctgtgaccgtgtccggagaggccgcacactccagtaccggg
tctgtcatctcagtggcagccaccagacccactgaatctcagctgcaaatactggagaga
aagaagcaacaagagaacaaagagctggaggaagagaggcgactggcggagaagagagag
agggaacgacagaaagagcaggaggaagaacgaaagaaagaggagagggagagagagaag
aagcgtttggaagaggagaaggaaaaggagaggaaacgactcgaggaagaggaggagaga
agaaagaaaagacagctggaggaagagcgggagaagagacagcaggcggccaacagagaa
ctgatggctaagaccaaggcccaagattcaggttcctcatctgattccgactccaaatcc
gactcttcatcacgctcatctcaatcgtcttcctccgccggggagaagcctcgtcctgcc
aggcagctgaagaaaactgaccagggacgagagccagatgatgagaaaaagacgaagctg
agtaaaggggcagagaaagaacacctcaaaaaaagcgaggtgtcagagcccagcgcagcc
gccgtgaccgaagtggaaccagactccgagggctccatggcccagcagccggcctccgga
gctgagccggacaacaacagcaacgaaggtcgcctggaggagagcaccactcctaaggct
ttcgctgctcgcaagatatccctgaccagcagcaagacgtctccggccaccacagaagga
ggagcgggagagtccgagacggcgactgcagcagggaggaagaggcgatggggctccagc
acggccgtcaccgctaagaaaccatccatcagcatcaccaccgactctctgaagtctttg
atcccagacatcaaagtcagccaggaggccgtggtggagctgcacccagaggagctgcag
ctgtctggggacgaggagaatctggacgccaaccggggcgaccaggacaagggcctcaag
atccggcgcacagtcacacaggtggtcgctgggggtgacggccaggagaatggacaggcc
aacgaagaggaagaagtggagaaaaccgagagagagaaacagcgcaggacttccaaagac
aaaaggaagaacagcgtgtcagaggaagccccggaaacacagatgtctatcaaagttgaa
ggagaagcgaagaaagtcacccccagcgacagtctggtgcgtcgctcaatcagtcagcag
aagtctggcgtgtccgtcaccatcgacgaccccgtccgcacaaacaaacagccctcgccg
cctcgtggcaaagtctcaaatatcatccatgtgaccaatctggtacgacccttcacgctg
ggccagctcaaagagctgctgaaccagacgggcagcatggtggaagacggcttctggatc
gacaagatcaagtctcactgcttcgtcacatacgctacgacagaggaggcggtgtccacc
agagctgctctccacggagtcaaatggcctcagagcaatcccaaagtcctcaacgtggac
ttctgtgaacaggaagaggttgactttcacaaagggatcctgaaaccagtgaaagaagag
gaccacgtcccacagcccggcgttccccagaaccgactgcccccactcatgcccgaacgg
gacagagagcgcgagcgggacagagtcgtggacagggaacgagaccgcgagcgagaccga
ggcgtggtgggagtgcgcgatctgtgggcggagcgagagagggagatggagcgccgcgag
cgggcccgcggagagcgggaatgggaccgggataaggttcgggagttcgccagacccggt
gaggaagagcggcgctctcgatccagagacagagagcgaaggaggagggagaggggcaag
agcaaggagaggaagactgataagaaggagaagggagatgaacctccagcgaagcttctt
gacgacttgttcctgaagaccaaagcggctccgtgtatatactggctccccctcactgag
gagcaggcggcgcagagggttctggaccgcaccgagcggcaaaaggaacgcgagcgcagg
cgcaaggagcaacaagaagaggagaaaaagcgtgaggaggagaagagagaggagaggttg
aaaacccgcgagaaggaaggcggcgtaacggcgagcagtggaggagccggacgaggcgcc
gacggagaccgagagagggagcgcggccgagaccgtgaggcagacaagaggagggatggc
ggccaccgacccagacgaccctccacgggcgccgggagcggacgtcgatcccgtagccgt
agcaaccccagagacagacgacgctga
DBGET
integrated database retrieval system
